Gene annotation
Transcriptome id Sobic.001G276600.1,Sobic.001G276600.2
Synonym Sb01g027290
Functional annotation peptide transporter PTR2, putative, expressed
UniProt A0A1Z5S7X9 , C5WPY3
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF107
NCBI CDD KOG1237; H+/oligopeptide symporter
KEGG Orthology K14638; SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT1G62200 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os10g02100.1 : peptide transporter PTR2, putative, expressed
MaizeGDB (Corn) Zm00025a003671
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G211800 - -
2 Sobic.008G150500 - -
3 Sobic.005G187000 cyclin-dependent kinase inhibitor, putative, expressed -
4 Sobic.006G187000 leucine-rich repeat family protein, putative, expressed -
5 Sobic.003G283900 leucine-rich repeat family protein, putative, expressed -
6 Sobic.003G016200 expressed protein -
7 Sobic.001G046400 expressed protein -
8 Sobic.009G137500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.002G029700 DUF640 domain containing protein, putative, expressed -
10 Sobic.006G151800 OsRR5 type-A response regulator, expressed K14492: two-component response regulator ARR-A family
11 Sobic.002G011000 expressed protein -
12 Sobic.006G160800 YABBY domain containing protein, putative, expressed -
13 Sobic.004G302700 YABBY domain containing protein, putative, expressed -
14 Sobic.007G179000 LRP1, putative, expressed -
15 Sobic.002G380800 - -
16 Sobic.008G012600 BTBA6 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
17 Sobic.002G035000 OsGrx_C10 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
18 Sobic.006G125200 ubiquitin family protein, putative, expressed -
19 Sobic.003G382400 MLO domain containing protein, putative, expressed K08472: mlo protein
20 Sobic.005G042200 homeobox domain containing protein, expressed -


Gene co-expression network
sample Sobic001G276600 Sobic001G276600 Sobic004G211800 Sobic004G211800 Sobic001G276600--Sobic004G211800 Sobic008G150500 Sobic008G150500 Sobic001G276600--Sobic008G150500 Sobic005G187000 Sobic005G187000 Sobic001G276600--Sobic005G187000 Sobic006G187000 Sobic006G187000 Sobic001G276600--Sobic006G187000 Sobic003G283900 Sobic003G283900 Sobic001G276600--Sobic003G283900 Sobic003G016200 Sobic003G016200 Sobic001G276600--Sobic003G016200 Sobic001G046400 Sobic001G046400 Sobic001G276600--Sobic001G046400 Sobic009G137500 Sobic009G137500 Sobic001G276600--Sobic009G137500 Sobic002G029700 Sobic002G029700 Sobic001G276600--Sobic002G029700 Sobic004G211800--Sobic003G283900 Sobic004G211800--Sobic008G150500 Sobic004G211800--Sobic002G029700 Sobic008G012600 Sobic008G012600 Sobic004G211800--Sobic008G012600 Sobic006G151800 Sobic006G151800 Sobic004G211800--Sobic006G151800 Sobic004G342000 Sobic004G342000 Sobic004G211800--Sobic004G342000 Sobic004G211800--Sobic003G016200 Sobic006G160800 Sobic006G160800 Sobic004G211800--Sobic006G160800 Sobic004G211800--Sobic001G046400 Sobic008G150500--Sobic006G187000 Sobic008G150500--Sobic001G046400 Sobic008G150500--Sobic003G283900 Sobic008G150500--Sobic004G211800 Sobic008G150500--Sobic003G016200 Sobic004G302700 Sobic004G302700 Sobic008G150500--Sobic004G302700 Sobic008G150500--Sobic002G029700 Sobic008G150500--Sobic009G137500 Sobic008G150500--Sobic004G342000 Sobic003G382400 Sobic003G382400 Sobic005G187000--Sobic003G382400 Sobic002G011000 Sobic002G011000 Sobic005G187000--Sobic002G011000 Sobic004G227900 Sobic004G227900 Sobic005G187000--Sobic004G227900 Sobic005G042200 Sobic005G042200 Sobic005G187000--Sobic005G042200 Sobic005G187000--Sobic006G160800 Sobic002G035000 Sobic002G035000 Sobic005G187000--Sobic002G035000 Sobic005G187000--Sobic006G151800 Sobic005G187000--Sobic002G029700 Sobic005G187000--Sobic008G012600 Sobic006G187000--Sobic008G150500 Sobic006G187000--Sobic009G137500 Sobic006G187000--Sobic001G046400 Sobic003G366000 Sobic003G366000 Sobic006G187000--Sobic003G366000 Sobic006G187000--Sobic004G302700 Sobic001G160000 Sobic001G160000 Sobic006G187000--Sobic001G160000 Sobic006G187000--Sobic003G016200 Sobic006G187000--Sobic003G283900 Sobic001G267100 Sobic001G267100 Sobic006G187000--Sobic001G267100 Sobic003G283900--Sobic003G016200 Sobic003G283900--Sobic004G211800 Sobic003G283900--Sobic008G150500 Sobic003G283900--Sobic001G046400 Sobic003G283900--Sobic004G302700 Sobic003G283900--Sobic006G187000 Sobic007G115400 Sobic007G115400 Sobic003G283900--Sobic007G115400 Sobic004G211700 Sobic004G211700 Sobic003G283900--Sobic004G211700 Sobic010G023400 Sobic010G023400 Sobic003G283900--Sobic010G023400 Sobic003G016200--Sobic003G283900 Sobic003G016200--Sobic001G046400 Sobic003G016200--Sobic008G150500 Sobic003G016200--Sobic006G187000 Sobic003G016200--Sobic004G211800 Sobic003G016200--Sobic004G302700 Sobic003G016200--Sobic004G342000 Sobic003G016200--Sobic009G137500 Sobic003G016200--Sobic002G029700 Sobic007G211200 Sobic007G211200 Sobic001G046400--Sobic007G211200 Sobic001G046400--Sobic008G150500 Sobic001G046400--Sobic006G187000 Sobic001G046400--Sobic004G302700 Sobic001G046400--Sobic004G342000 Sobic002G337600 Sobic002G337600 Sobic001G046400--Sobic002G337600 Sobic001G046400--Sobic003G016200 Sobic001G046400--Sobic004G211700 Sobic001G046400--Sobic003G283900 Sobic009G137500--Sobic006G187000 Sobic009G137500--Sobic001G267100 Sobic006G105600 Sobic006G105600 Sobic009G137500--Sobic006G105600 Sobic006G255300 Sobic006G255300 Sobic009G137500--Sobic006G255300 Sobic009G137500--Sobic003G366000 Sobic009G137500--Sobic003G016200 Sobic001G276800 Sobic001G276800 Sobic009G137500--Sobic001G276800 Sobic009G137500--Sobic008G150500 Sobic009G137500--Sobic001G046400 Sobic002G029700--Sobic006G151800 Sobic006G098300 Sobic006G098300 Sobic002G029700--Sobic006G098300 Sobic001G334501 Sobic001G334501 Sobic002G029700--Sobic001G334501 Sobic005G089700 Sobic005G089700 Sobic002G029700--Sobic005G089700 Sobic005G226500 Sobic005G226500 Sobic002G029700--Sobic005G226500 Sobic007G048500 Sobic007G048500 Sobic002G029700--Sobic007G048500 Sobic009G075000 Sobic009G075000 Sobic002G029700--Sobic009G075000 Sobic007G098600 Sobic007G098600 Sobic002G029700--Sobic007G098600 Sobic003G088200 Sobic003G088200 Sobic002G029700--Sobic003G088200
Octagon: transcription factors


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