Gene annotation
Transcriptome id Sobic.001G344400.2,Sobic.001G344400.1
Synonym Sb01g033050, FAB1, ATKAS2, KAS2
Functional annotation 3-oxoacyl-synthase, putative, expressed
UniProt A0A1B6QMQ7 , A0A1B6QMP0
Pfam PF02801 PF00109
Panther DB PTHR11712 PTHR11712:SF287
NCBI CDD -
KEGG Orthology K09458; fabF, OXSM, 3-oxoacyl-[acyl-carrier-protein] synthase II
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G74960 : fatty acid biosynthesis 1
RAP-DB (Rice) LOC_Os03g28420.1 : 3-oxoacyl-synthase, putative, expressed
MaizeGDB (Corn) Zm00025a052151
Brachypodium KQK15130 , KQK21343
Barley HORVU2Hr1G030950.1 , HORVU2Hr1G030950.3 , HORVU2Hr1G030950.2 , HORVU4Hr1G041610.16 , HORVU4Hr1G041610.17 , HORVU4Hr1G041610.14 , HORVU4Hr1G041610.15 , HORVU4Hr1G041610.12 , HORVU4Hr1G041610.13 , HORVU4Hr1G041610.10 , HORVU4Hr1G041610.9 , HORVU4Hr1G041610.4 , HORVU4Hr1G041610.5 , HORVU4Hr1G041610.6 , HORVU4Hr1G041610.7 , HORVU4Hr1G041610.1 , HORVU4Hr1G041610.2 , HORVU4Hr1G041610.8
Wheat TraesCS4D02G157500 , TraesCS4D02G157500 , TraesCS2A02G168500 , TraesCS2A02G168500 , TraesCS2B02G194700 , TraesCS4B02G150600 , TraesCS4A02G165600 , TraesCS4A02G165600 , TraesCS4B02G150600
Populus -


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cDNA sequences
Sobic.001G344400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G329400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@beta-amylase, putative, expressed -
2 Sobic.006G090400 OsRR1 type-A response regulator, expressed K14492: two-component response regulator ARR-A family
3 Sobic.007G005850 - -
4 Sobic.005G202600 tropinone reductase 2, putative, expressed -
5 Sobic.010G030800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger family protein, putative, expressed -
6 Sobic.004G018150 - -
7 Sobic.009G222200 E3 ubiquitin ligase, putative, expressed K16276: K16276, zinc finger protein-like protein
8 Sobic.001G361700 expressed protein -
9 Sobic.003G199800 expressed protein -
10 Sobic.010G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@agenet domain containing protein, putative, expressed -
11 Sobic.001G338500 ACT domain containing protein, expressed -
12 Sobic.004G026300 heat shock protein 18.2(PubMedID : 26465154)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
13 Sobic.002G120700 decarboxylase, putative, expressed K01592: tyrosine decarboxylase
14 Sobic.010G276400 "Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@"Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@carotenoid biosynthesi(PubMedID : 18162592)@phytoene synthase, chloroplast precursor, putative, expressed K02291: 15-cis-phytoene synthase
15 Sobic.007G189700 - -
16 Sobic.001G068400 - -
17 Sobic.002G000500 isoflavone reductase, putative, expressed -
18 Sobic.002G040100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
19 Sobic.002G381100 expressed protein -
20 Sobic.005G110502 - -


Gene co-expression network
sample Sobic001G344400 Sobic001G344400 Sobic002G329400 Sobic002G329400 Sobic001G344400--Sobic002G329400 Sobic006G090400 Sobic006G090400 Sobic001G344400--Sobic006G090400 Sobic007G005850 Sobic007G005850 Sobic001G344400--Sobic007G005850 Sobic005G202600 Sobic005G202600 Sobic001G344400--Sobic005G202600 Sobic010G030800 Sobic010G030800 Sobic001G344400--Sobic010G030800 Sobic004G018150 Sobic004G018150 Sobic001G344400--Sobic004G018150 Sobic009G222200 Sobic009G222200 Sobic001G344400--Sobic009G222200 Sobic001G361700 Sobic001G361700 Sobic001G344400--Sobic001G361700 Sobic003G199800 Sobic003G199800 Sobic001G344400--Sobic003G199800 Sobic003G234400 Sobic003G234400 Sobic002G329400--Sobic003G234400 Sobic002G329400--Sobic005G202600 Sobic003G036100 Sobic003G036100 Sobic002G329400--Sobic003G036100 Sobic002G329400--Sobic010G030800 Sobic002G329400--Sobic001G344400 Sobic004G353700 Sobic004G353700 Sobic002G329400--Sobic004G353700 Sobic010G095000 Sobic010G095000 Sobic002G329400--Sobic010G095000 Sobic004G026300 Sobic004G026300 Sobic002G329400--Sobic004G026300 Sobic001G076900 Sobic001G076900 Sobic002G329400--Sobic001G076900 Sobic006G090300 Sobic006G090300 Sobic006G090400--Sobic006G090300 Sobic006G090400--Sobic001G344400 Sobic006G090400--Sobic007G005850 Sobic006G090400--Sobic002G329400 Sobic003G237600 Sobic003G237600 Sobic006G090400--Sobic003G237600 Sobic006G090400--Sobic010G030800 Sobic001G189100 Sobic001G189100 Sobic006G090400--Sobic001G189100 Sobic002G213000 Sobic002G213000 Sobic006G090400--Sobic002G213000 Sobic007G005850--Sobic006G090400 Sobic007G005850--Sobic002G329400 Sobic007G005850--Sobic001G344400 Sobic007G005850--Sobic004G018150 Sobic007G005850--Sobic005G202600 Sobic007G005850--Sobic010G030800 Sobic001G123800 Sobic001G123800 Sobic007G005850--Sobic001G123800 Sobic009G244600 Sobic009G244600 Sobic007G005850--Sobic009G244600 Sobic004G267000 Sobic004G267000 Sobic007G005850--Sobic004G267000 Sobic005G202600--Sobic010G030800 Sobic005G202600--Sobic003G036100 Sobic007G189700 Sobic007G189700 Sobic005G202600--Sobic007G189700 Sobic005G202600--Sobic004G353700 Sobic001G111700 Sobic001G111700 Sobic005G202600--Sobic001G111700 Sobic005G202600--Sobic002G329400 Sobic005G202600--Sobic009G222200 Sobic005G202600--Sobic001G189100 Sobic010G030800--Sobic007G189700 Sobic010G030800--Sobic009G222200 Sobic010G183100 Sobic010G183100 Sobic010G030800--Sobic010G183100 Sobic010G030800--Sobic005G202600 Sobic003G235500 Sobic003G235500 Sobic010G030800--Sobic003G235500 Sobic010G030800--Sobic004G353700 Sobic010G030800--Sobic003G036100 Sobic010G030800--Sobic001G189100 Sobic004G018150--Sobic005G202600 Sobic004G018150--Sobic009G222200 Sobic004G018150--Sobic010G030800 Sobic004G018150--Sobic003G237600 Sobic004G018150--Sobic001G189100 Sobic004G018150--Sobic001G344400 Sobic004G018150--Sobic004G353700 Sobic004G018150--Sobic006G090400 Sobic009G222200--Sobic010G183100 Sobic009G222200--Sobic003G237600 Sobic009G222200--Sobic001G189100 Sobic009G222200--Sobic010G030800 Sobic001G355600 Sobic001G355600 Sobic009G222200--Sobic001G355600 Sobic009G222200--Sobic007G189700 Sobic009G222200--Sobic003G036100 Sobic004G035700 Sobic004G035700 Sobic009G222200--Sobic004G035700 Sobic004G026700 Sobic004G026700 Sobic001G361700--Sobic004G026700 Sobic002G000500 Sobic002G000500 Sobic001G361700--Sobic002G000500 Sobic001G068400 Sobic001G068400 Sobic001G361700--Sobic001G068400 Sobic010G183032 Sobic010G183032 Sobic001G361700--Sobic010G183032 Sobic002G040100 Sobic002G040100 Sobic001G361700--Sobic002G040100 Sobic010G108401 Sobic010G108401 Sobic001G361700--Sobic010G108401 Sobic001G361700--Sobic010G183100 Sobic006G011100 Sobic006G011100 Sobic001G361700--Sobic006G011100 Sobic010G038500 Sobic010G038500 Sobic001G361700--Sobic010G038500 Sobic003G199800--Sobic002G040100 Sobic010G276400 Sobic010G276400 Sobic003G199800--Sobic010G276400 Sobic003G199800--Sobic002G000500 Sobic003G199800--Sobic010G183100 Sobic004G035500 Sobic004G035500 Sobic003G199800--Sobic004G035500 Sobic008G038300 Sobic008G038300 Sobic003G199800--Sobic008G038300 Sobic010G109500 Sobic010G109500 Sobic003G199800--Sobic010G109500 Sobic003G199800--Sobic007G189700 Sobic009G191300 Sobic009G191300 Sobic003G199800--Sobic009G191300
Octagon: transcription factors


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