Gene annotation
Transcriptome id Sobic.007G005850.1
Synonym -
Functional annotation -
UniProt A0A109NDN1 , A0A1Z5R7P9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G090400 OsRR1 type-A response regulator, expressed K14492: two-component response regulator ARR-A family
2 Sobic.002G329400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@beta-amylase, putative, expressed -
3 Sobic.001G344400 3-oxoacyl-synthase, putative, expressed K09458: fabF, OXSM, 3-oxoacyl-[acyl-carrier-protein] synthase II
4 Sobic.004G018150 - -
5 Sobic.005G202600 tropinone reductase 2, putative, expressed -
6 Sobic.010G030800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger family protein, putative, expressed -
7 Sobic.001G123800 expressed protein -
8 Sobic.009G244600 MYB family transcription factor, putative, expressed -
9 Sobic.004G267000 RAD-like 6(PubMedID : 26465154)@MYB family transcription factor, putative, expressed -
10 Sobic.001G189100 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
11 Sobic.001G189100 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
12 Sobic.003G237600 expressed protein -
13 Sobic.003G231800 down-regulated TF in developmental senescence(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
14 Sobic.006G006700 - -
15 Sobic.009G222200 E3 ubiquitin ligase, putative, expressed K16276: K16276, zinc finger protein-like protein
16 Sobic.006G046100 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed -
17 Sobic.003G036100 - -
18 Sobic.002G214300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.003G235500 expressed protein -
20 Sobic.007G198200 - -


Gene co-expression network
sample Sobic007G005850 Sobic007G005850 Sobic006G090400 Sobic006G090400 Sobic007G005850--Sobic006G090400 Sobic002G329400 Sobic002G329400 Sobic007G005850--Sobic002G329400 Sobic001G344400 Sobic001G344400 Sobic007G005850--Sobic001G344400 Sobic004G018150 Sobic004G018150 Sobic007G005850--Sobic004G018150 Sobic005G202600 Sobic005G202600 Sobic007G005850--Sobic005G202600 Sobic010G030800 Sobic010G030800 Sobic007G005850--Sobic010G030800 Sobic001G123800 Sobic001G123800 Sobic007G005850--Sobic001G123800 Sobic009G244600 Sobic009G244600 Sobic007G005850--Sobic009G244600 Sobic004G267000 Sobic004G267000 Sobic007G005850--Sobic004G267000 Sobic006G090300 Sobic006G090300 Sobic006G090400--Sobic006G090300 Sobic006G090400--Sobic001G344400 Sobic006G090400--Sobic007G005850 Sobic006G090400--Sobic002G329400 Sobic003G237600 Sobic003G237600 Sobic006G090400--Sobic003G237600 Sobic006G090400--Sobic010G030800 Sobic001G189100 Sobic001G189100 Sobic006G090400--Sobic001G189100 Sobic002G213000 Sobic002G213000 Sobic006G090400--Sobic002G213000 Sobic003G234400 Sobic003G234400 Sobic002G329400--Sobic003G234400 Sobic002G329400--Sobic005G202600 Sobic003G036100 Sobic003G036100 Sobic002G329400--Sobic003G036100 Sobic002G329400--Sobic010G030800 Sobic002G329400--Sobic001G344400 Sobic004G353700 Sobic004G353700 Sobic002G329400--Sobic004G353700 Sobic010G095000 Sobic010G095000 Sobic002G329400--Sobic010G095000 Sobic004G026300 Sobic004G026300 Sobic002G329400--Sobic004G026300 Sobic001G076900 Sobic001G076900 Sobic002G329400--Sobic001G076900 Sobic001G344400--Sobic002G329400 Sobic001G344400--Sobic006G090400 Sobic001G344400--Sobic007G005850 Sobic001G344400--Sobic005G202600 Sobic001G344400--Sobic010G030800 Sobic001G344400--Sobic004G018150 Sobic009G222200 Sobic009G222200 Sobic001G344400--Sobic009G222200 Sobic001G361700 Sobic001G361700 Sobic001G344400--Sobic001G361700 Sobic003G199800 Sobic003G199800 Sobic001G344400--Sobic003G199800 Sobic004G018150--Sobic005G202600 Sobic004G018150--Sobic009G222200 Sobic004G018150--Sobic010G030800 Sobic004G018150--Sobic003G237600 Sobic004G018150--Sobic001G189100 Sobic004G018150--Sobic001G344400 Sobic004G018150--Sobic004G353700 Sobic004G018150--Sobic006G090400 Sobic005G202600--Sobic010G030800 Sobic005G202600--Sobic003G036100 Sobic007G189700 Sobic007G189700 Sobic005G202600--Sobic007G189700 Sobic005G202600--Sobic004G353700 Sobic001G111700 Sobic001G111700 Sobic005G202600--Sobic001G111700 Sobic005G202600--Sobic002G329400 Sobic005G202600--Sobic009G222200 Sobic005G202600--Sobic001G189100 Sobic010G030800--Sobic007G189700 Sobic010G030800--Sobic009G222200 Sobic010G183100 Sobic010G183100 Sobic010G030800--Sobic010G183100 Sobic010G030800--Sobic005G202600 Sobic003G235500 Sobic003G235500 Sobic010G030800--Sobic003G235500 Sobic010G030800--Sobic004G353700 Sobic010G030800--Sobic003G036100 Sobic010G030800--Sobic001G189100 Sobic001G123800--Sobic009G244600 Sobic001G123800--Sobic004G267000 Sobic001G123800--Sobic001G189100 Sobic006G006700 Sobic006G006700 Sobic001G123800--Sobic006G006700 Sobic007G198200 Sobic007G198200 Sobic001G123800--Sobic007G198200 Sobic003G231800 Sobic003G231800 Sobic001G123800--Sobic003G231800 Sobic001G123800--Sobic003G237600 Sobic001G123800--Sobic003G036100 Sobic009G244600--Sobic003G231800 Sobic009G244300 Sobic009G244300 Sobic009G244600--Sobic009G244300 Sobic009G244600--Sobic004G267000 Sobic009G244600--Sobic006G006700 Sobic003G241900 Sobic003G241900 Sobic009G244600--Sobic003G241900 Sobic009G244600--Sobic003G237600 Sobic009G244600--Sobic003G199800 Sobic001G068400 Sobic001G068400 Sobic009G244600--Sobic001G068400 Sobic009G244600--Sobic001G189100 Sobic004G267000--Sobic009G244300 Sobic004G267000--Sobic009G244600 Sobic004G267000--Sobic003G231800 Sobic004G267000--Sobic003G241900 Sobic004G267000--Sobic001G076900 Sobic005G056400 Sobic005G056400 Sobic004G267000--Sobic005G056400 Sobic002G116000 Sobic002G116000 Sobic004G267000--Sobic002G116000 Sobic004G305800 Sobic004G305800 Sobic004G267000--Sobic004G305800 Sobic007G004850 Sobic007G004850 Sobic004G267000--Sobic007G004850
Octagon: transcription factors


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