Gene annotation
Transcriptome id Sobic.007G198200.1
Synonym
Functional annotation -
UniProt A0A1B6PIX5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G036100 - -
2 Sobic.004G353700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.003G234400 CA(PubMedID : 19549309)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
4 Sobic.004G267000 RAD-like 6(PubMedID : 26465154)@MYB family transcription factor, putative, expressed -
5 Sobic.005G056400 Fructose-bisphosphate aldolase(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"Fructose-bisphosphate aldolase, putative (Os)"(PubMedID : 27208977)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
6 Sobic.001G406000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.13 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
7 Sobic.003G231800 down-regulated TF in developmental senescence(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
8 Sobic.001G076900 Uncharacterised protein family (UPF0497)(PubMedID : 26465154)@membrane associated DUF588 domain containing protein, putative, expressed -
9 Sobic.001G123800 expressed protein -
10 Sobic.009G244600 MYB family transcription factor, putative, expressed -
11 Sobic.007G189700 - -
12 Sobic.002G214300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.001G329400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1230 domain containing protein, expressed -
14 Sobic.003G370000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chlorophyll A-B binding protein, putative, expressed K03542: photosystem II 22kDa protein
15 Sobic.007G161500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PGR5, putative, expressed -
16 Sobic.004G026300 heat shock protein 18.2(PubMedID : 26465154)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
17 Sobic.002G329400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@beta-amylase, putative, expressed -
18 Sobic.001G111700 alpha/beta-Hydrolases superfamily protein(PubMedID : 26465154)@alpha/beta-Hydrolases superfamily protein(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
19 Sobic.004G238600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@starch synthase, putative, expressed K00703: starch synthase
20 Sobic.003G235500 expressed protein -


Gene co-expression network
sample Sobic007G198200 Sobic007G198200 Sobic003G036100 Sobic003G036100 Sobic007G198200--Sobic003G036100 Sobic004G353700 Sobic004G353700 Sobic007G198200--Sobic004G353700 Sobic003G234400 Sobic003G234400 Sobic007G198200--Sobic003G234400 Sobic004G267000 Sobic004G267000 Sobic007G198200--Sobic004G267000 Sobic005G056400 Sobic005G056400 Sobic007G198200--Sobic005G056400 Sobic001G406000 Sobic001G406000 Sobic007G198200--Sobic001G406000 Sobic003G231800 Sobic003G231800 Sobic007G198200--Sobic003G231800 Sobic001G076900 Sobic001G076900 Sobic007G198200--Sobic001G076900 Sobic001G123800 Sobic001G123800 Sobic007G198200--Sobic001G123800 Sobic001G189100 Sobic001G189100 Sobic003G036100--Sobic001G189100 Sobic003G237600 Sobic003G237600 Sobic003G036100--Sobic003G237600 Sobic003G036100--Sobic004G353700 Sobic007G189700 Sobic007G189700 Sobic003G036100--Sobic007G189700 Sobic010G030800 Sobic010G030800 Sobic003G036100--Sobic010G030800 Sobic009G222200 Sobic009G222200 Sobic003G036100--Sobic009G222200 Sobic009G254600 Sobic009G254600 Sobic003G036100--Sobic009G254600 Sobic001G111700 Sobic001G111700 Sobic003G036100--Sobic001G111700 Sobic004G353700--Sobic003G234400 Sobic004G353700--Sobic003G036100 Sobic004G353700--Sobic007G189700 Sobic004G353700--Sobic010G030800 Sobic004G353700--Sobic001G406000 Sobic004G353700--Sobic009G222200 Sobic002G214300 Sobic002G214300 Sobic004G353700--Sobic002G214300 Sobic005G202600 Sobic005G202600 Sobic004G353700--Sobic005G202600 Sobic004G353700--Sobic001G111700 Sobic006G008700 Sobic006G008700 Sobic003G234400--Sobic006G008700 Sobic010G095000 Sobic010G095000 Sobic003G234400--Sobic010G095000 Sobic003G303700 Sobic003G303700 Sobic003G234400--Sobic003G303700 Sobic008G021300 Sobic008G021300 Sobic003G234400--Sobic008G021300 Sobic003G234400--Sobic004G353700 Sobic008G061401 Sobic008G061401 Sobic003G234400--Sobic008G061401 Sobic003G234400--Sobic001G076900 Sobic004G026300 Sobic004G026300 Sobic003G234400--Sobic004G026300 Sobic010G201700 Sobic010G201700 Sobic003G234400--Sobic010G201700 Sobic009G244300 Sobic009G244300 Sobic004G267000--Sobic009G244300 Sobic009G244600 Sobic009G244600 Sobic004G267000--Sobic009G244600 Sobic004G267000--Sobic003G231800 Sobic003G241900 Sobic003G241900 Sobic004G267000--Sobic003G241900 Sobic004G267000--Sobic001G076900 Sobic004G267000--Sobic005G056400 Sobic002G116000 Sobic002G116000 Sobic004G267000--Sobic002G116000 Sobic004G305800 Sobic004G305800 Sobic004G267000--Sobic004G305800 Sobic007G004850 Sobic007G004850 Sobic004G267000--Sobic007G004850 Sobic007G161500 Sobic007G161500 Sobic005G056400--Sobic007G161500 Sobic005G056400--Sobic004G305800 Sobic003G127800 Sobic003G127800 Sobic005G056400--Sobic003G127800 Sobic003G370000 Sobic003G370000 Sobic005G056400--Sobic003G370000 Sobic010G188300 Sobic010G188300 Sobic005G056400--Sobic010G188300 Sobic005G056400--Sobic001G076900 Sobic001G491000 Sobic001G491000 Sobic005G056400--Sobic001G491000 Sobic001G329400 Sobic001G329400 Sobic005G056400--Sobic001G329400 Sobic006G057866 Sobic006G057866 Sobic005G056400--Sobic006G057866 Sobic006G244000 Sobic006G244000 Sobic001G406000--Sobic006G244000 Sobic001G406000--Sobic007G189700 Sobic001G406000--Sobic004G353700 Sobic001G406000--Sobic010G030800 Sobic008G104601 Sobic008G104601 Sobic001G406000--Sobic008G104601 Sobic003G235500 Sobic003G235500 Sobic001G406000--Sobic003G235500 Sobic001G406000--Sobic003G234400 Sobic001G406000--Sobic001G329400 Sobic003G431900 Sobic003G431900 Sobic001G406000--Sobic003G431900 Sobic003G231800--Sobic009G244300 Sobic003G231800--Sobic009G244600 Sobic003G231800--Sobic004G267000 Sobic010G183100 Sobic010G183100 Sobic003G231800--Sobic010G183100 Sobic007G034300 Sobic007G034300 Sobic003G231800--Sobic007G034300 Sobic001G520800 Sobic001G520800 Sobic003G231800--Sobic001G520800 Sobic006G006700 Sobic006G006700 Sobic003G231800--Sobic006G006700 Sobic003G231800--Sobic009G254600 Sobic003G231800--Sobic003G235500 Sobic001G076900--Sobic005G056400 Sobic001G076900--Sobic003G370000 Sobic001G076900--Sobic010G095000 Sobic001G020100 Sobic001G020100 Sobic001G076900--Sobic001G020100 Sobic001G076900--Sobic004G305800 Sobic001G076900--Sobic003G234400 Sobic005G202500 Sobic005G202500 Sobic001G076900--Sobic005G202500 Sobic002G370600 Sobic002G370600 Sobic001G076900--Sobic002G370600 Sobic004G283100 Sobic004G283100 Sobic001G076900--Sobic004G283100 Sobic001G123800--Sobic009G244600 Sobic001G123800--Sobic004G267000 Sobic001G123800--Sobic001G189100 Sobic001G123800--Sobic006G006700 Sobic001G123800--Sobic007G198200 Sobic001G123800--Sobic003G231800 Sobic001G123800--Sobic003G237600 Sobic001G123800--Sobic003G036100
Octagon: transcription factors


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