Gene annotation
Transcriptome id Sobic.001G396700.1
Synonym ATXT1, XT1, XXT1, Sb01g037540
Functional annotation glycosyltransferase, putative, expressed
UniProt C5WMH8
Pfam PF05637
Panther DB PTHR31311 PTHR31311:SF7
NCBI CDD KOG4748; Subunit of Golgi mannosyltransferase complex
KEGG Orthology -
Gene Ontology GO:0016757; transferase activity, transferring glycosyl groups GO:0016021integral component of membrane


Orthologs (automatic annotation)
TAIR AT3G62720 : xylosyltransferase 1
RAP-DB (Rice) LOC_Os03g19310.1 : glycosyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a052567 , Zm00025a002120 , Zm00025a023350 , Zm00025a033551 , Zm00025a053888
Brachypodium KQK22016 , KQK22017 , PNT63497
Barley HORVU7Hr1G102070.1 , HORVU7Hr1G102070.2 , HORVU4Hr1G054120.4 , HORVU4Hr1G054120.2 , HORVU4Hr1G054120.3 , HORVU4Hr1G054020.1 , HORVU4Hr1G054020.3 , HORVU4Hr1G054020.2 , HORVU4Hr1G054120.5
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G239700 receptor-like protein kinase 2 precursor, putative, expressed -
2 Sobic.008G077900 exostosin family domain containing protein, expressed -
3 Sobic.006G205500 glycosyl hydrolases family 16, putative, expressed -
4 Sobic.001G349200 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed -
5 Sobic.010G170150 - -
6 Sobic.003G001300 ZOS1-05 - C2H2 zinc finger protein, expressed -
7 Sobic.006G209000 Protein transferase (Os)(PubMedID : 27208977)@transferase family domain containing protein, expressed -
8 Sobic.001G348200 expressed protein -
9 Sobic.010G082100 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
10 Sobic.006G117500 polygalacturonase inhibitor 1 precursor, putative, expressed -
11 Sobic.005G222600 RGH1A, putative, expressed K13457: RPM1, disease resistance protein RPM1
12 Sobic.010G096700 leaf senescence related protein, putative, expressed -
13 Sobic.004G214300 AP2-like ethylene-responsive transcription factor PLETHORA 2, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
14 Sobic.002G235800 expressed protein -
15 Sobic.009G015166 - -
16 Sobic.005G071700 expressed protein K13457: RPM1, disease resistance protein RPM1
17 Sobic.001G506600 exostosin family domain containing protein, expressed -
18 Sobic.010G155100 NAC domain containing protein, putative, expressed -
19 Sobic.009G106100 GCRP9 - Glycine and cysteine rich family protein precursor, expressed -
20 Sobic.005G104200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic001G396700 Sobic001G396700 Sobic002G239700 Sobic002G239700 Sobic001G396700--Sobic002G239700 Sobic008G077900 Sobic008G077900 Sobic001G396700--Sobic008G077900 Sobic006G205500 Sobic006G205500 Sobic001G396700--Sobic006G205500 Sobic001G349200 Sobic001G349200 Sobic001G396700--Sobic001G349200 Sobic010G170150 Sobic010G170150 Sobic001G396700--Sobic010G170150 Sobic003G001300 Sobic003G001300 Sobic001G396700--Sobic003G001300 Sobic006G209000 Sobic006G209000 Sobic001G396700--Sobic006G209000 Sobic001G348200 Sobic001G348200 Sobic001G396700--Sobic001G348200 Sobic010G082100 Sobic010G082100 Sobic001G396700--Sobic010G082100 Sobic002G239700--Sobic008G077900 Sobic005G222600 Sobic005G222600 Sobic002G239700--Sobic005G222600 Sobic002G239700--Sobic006G205500 Sobic001G232000 Sobic001G232000 Sobic002G239700--Sobic001G232000 Sobic005G071700 Sobic005G071700 Sobic002G239700--Sobic005G071700 Sobic003G419300 Sobic003G419300 Sobic002G239700--Sobic003G419300 Sobic002G239700--Sobic003G001300 Sobic003G419400 Sobic003G419400 Sobic002G239700--Sobic003G419400 Sobic009G060700 Sobic009G060700 Sobic002G239700--Sobic009G060700 Sobic008G077900--Sobic003G001300 Sobic008G077900--Sobic005G222600 Sobic003G140200 Sobic003G140200 Sobic008G077900--Sobic003G140200 Sobic004G322000 Sobic004G322000 Sobic008G077900--Sobic004G322000 Sobic008G077900--Sobic002G239700 Sobic008G077900--Sobic009G060700 Sobic008G077900--Sobic006G205500 Sobic007G090600 Sobic007G090600 Sobic008G077900--Sobic007G090600 Sobic008G077900--Sobic005G071700 Sobic006G205500--Sobic008G077900 Sobic006G117500 Sobic006G117500 Sobic006G205500--Sobic006G117500 Sobic006G205500--Sobic003G001300 Sobic010G096700 Sobic010G096700 Sobic006G205500--Sobic010G096700 Sobic001G506600 Sobic001G506600 Sobic006G205500--Sobic001G506600 Sobic006G205500--Sobic002G239700 Sobic006G205500--Sobic005G222600 Sobic008G035700 Sobic008G035700 Sobic006G205500--Sobic008G035700 Sobic006G205500--Sobic004G322000 Sobic009G106100 Sobic009G106100 Sobic001G349200--Sobic009G106100 Sobic001G349200--Sobic006G209000 Sobic001G349200--Sobic008G077900 Sobic001G349200--Sobic006G205500 Sobic001G349200--Sobic010G096700 Sobic001G349200--Sobic003G001300 Sobic001G274400 Sobic001G274400 Sobic001G349200--Sobic001G274400 Sobic005G093101 Sobic005G093101 Sobic001G349200--Sobic005G093101 Sobic002G235800 Sobic002G235800 Sobic001G349200--Sobic002G235800 Sobic001G075300 Sobic001G075300 Sobic010G170150--Sobic001G075300 Sobic010G170150--Sobic010G082100 Sobic008G076700 Sobic008G076700 Sobic010G170150--Sobic008G076700 Sobic009G150600 Sobic009G150600 Sobic010G170150--Sobic009G150600 Sobic010G170150--Sobic001G349200 Sobic010G170150--Sobic001G348200 Sobic010G170150--Sobic001G396700 Sobic002G373700 Sobic002G373700 Sobic010G170150--Sobic002G373700 Sobic010G170150--Sobic006G209000 Sobic003G001300--Sobic008G077900 Sobic003G001300--Sobic009G060700 Sobic003G001300--Sobic005G222600 Sobic010G152500 Sobic010G152500 Sobic003G001300--Sobic010G152500 Sobic008G138700 Sobic008G138700 Sobic003G001300--Sobic008G138700 Sobic006G092100 Sobic006G092100 Sobic003G001300--Sobic006G092100 Sobic007G154100 Sobic007G154100 Sobic003G001300--Sobic007G154100 Sobic003G001300--Sobic004G322000 Sobic010G152300 Sobic010G152300 Sobic003G001300--Sobic010G152300 Sobic006G209000--Sobic007G154100 Sobic006G108300 Sobic006G108300 Sobic006G209000--Sobic006G108300 Sobic005G071900 Sobic005G071900 Sobic006G209000--Sobic005G071900 Sobic004G312500 Sobic004G312500 Sobic006G209000--Sobic004G312500 Sobic001G503000 Sobic001G503000 Sobic006G209000--Sobic001G503000 Sobic002G029600 Sobic002G029600 Sobic006G209000--Sobic002G029600 Sobic006G209000--Sobic010G096700 Sobic006G209000--Sobic001G506600 Sobic006G209000--Sobic009G106100 Sobic001G348200--Sobic010G082100 Sobic005G079400 Sobic005G079400 Sobic001G348200--Sobic005G079400 Sobic003G240500 Sobic003G240500 Sobic001G348200--Sobic003G240500 Sobic001G102000 Sobic001G102000 Sobic001G348200--Sobic001G102000 Sobic001G348200--Sobic001G349200 Sobic001G506700 Sobic001G506700 Sobic001G348200--Sobic001G506700 Sobic001G348200--Sobic009G106100 Sobic005G066300 Sobic005G066300 Sobic001G348200--Sobic005G066300 Sobic003G287200 Sobic003G287200 Sobic001G348200--Sobic003G287200 Sobic010G082100--Sobic003G240500 Sobic001G506500 Sobic001G506500 Sobic010G082100--Sobic001G506500 Sobic007G007300 Sobic007G007300 Sobic010G082100--Sobic007G007300 Sobic005G110514 Sobic005G110514 Sobic010G082100--Sobic005G110514 Sobic010G082100--Sobic009G106100 Sobic006G266800 Sobic006G266800 Sobic010G082100--Sobic006G266800 Sobic004G308500 Sobic004G308500 Sobic010G082100--Sobic004G308500 Sobic010G082100--Sobic001G274400 Sobic010G082100--Sobic010G170150
Octagon: transcription factors


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