Gene annotation
Transcriptome id Sobic.001G409850.1
Synonym -
Functional annotation -
UniProt A0A1Z5SA27
Pfam PF01490
Panther DB PTHR22950 PTHR22950:SF327
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G40780 : lysine histidine transporter 1
RAP-DB (Rice) LOC_Os04g38860.1 : expressed protein
MaizeGDB (Corn) Zm00025a040343 , Zm00025a011107
Brachypodium KQJ82996 , KQJ82995
Barley HORVU2Hr1G080590.1 , HORVU2Hr1G080590.5 , HORVU2Hr1G080590.2 , HORVU2Hr1G080590.3 , HORVU2Hr1G080590.4
Wheat TraesCS2D02G325500 , TraesCS2A02G337400 , TraesCS2A02G584328 , TraesCS2B02G344500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G044301 - -
2 Sobic.004G152300 X8 domain containing protein, expressed -
3 Sobic.010G075100 myb-like DNA-binding domain, SHAQKYF class family protein, expressed -
4 Sobic.010G110601 - -
5 Sobic.002G182500 nucleic acid binding protein, putative, expressed -
6 Sobic.006G002100 phosphoglycerate mutase, putative, expressed -
7 Sobic.006G036500 peptidyl-prolyl cis-trans isomerase, chloroplast precursor, putative, expressed -
8 Sobic.006G275401 - -
9 Sobic.002G222400 expressed protein -
10 Sobic.008G105200 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
11 Sobic.001G129650 - -
12 Sobic.003G240300 ATBPM6, putative -
13 Sobic.004G135700 - -
14 Sobic.010G204100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450 71D7, putative, expressed -
15 Sobic.009G201100 metalloendoproteinase 1 precursor, putative, expressed -
16 Sobic.007G169500 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@Ribosomal protein L1p/L10e family("PubMedID : 26759170,PubMedID : 24597475")@L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae
17 Sobic.009G009400 expressed protein -
18 Sobic.001G343601 - K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
19 Sobic.002G379100 dehydrogenase, putative, expressed -
20 Sobic.008G079032 - -


Gene co-expression network
sample Sobic001G409850 Sobic001G409850 Sobic006G044301 Sobic006G044301 Sobic001G409850--Sobic006G044301 Sobic004G152300 Sobic004G152300 Sobic001G409850--Sobic004G152300 Sobic010G075100 Sobic010G075100 Sobic001G409850--Sobic010G075100 Sobic010G110601 Sobic010G110601 Sobic001G409850--Sobic010G110601 Sobic002G182500 Sobic002G182500 Sobic001G409850--Sobic002G182500 Sobic006G002100 Sobic006G002100 Sobic001G409850--Sobic006G002100 Sobic006G036500 Sobic006G036500 Sobic001G409850--Sobic006G036500 Sobic006G275401 Sobic006G275401 Sobic001G409850--Sobic006G275401 Sobic002G222400 Sobic002G222400 Sobic001G409850--Sobic002G222400 Sobic004G135700 Sobic004G135700 Sobic006G044301--Sobic004G135700 Sobic006G044301--Sobic006G036500 Sobic006G044301--Sobic002G182500 Sobic006G074400 Sobic006G074400 Sobic006G044301--Sobic006G074400 Sobic006G044301--Sobic006G002100 Sobic009G009400 Sobic009G009400 Sobic006G044301--Sobic009G009400 Sobic006G044301--Sobic001G409850 Sobic002G183100 Sobic002G183100 Sobic006G044301--Sobic002G183100 Sobic005G169100 Sobic005G169100 Sobic006G044301--Sobic005G169100 Sobic010G261000 Sobic010G261000 Sobic004G152300--Sobic010G261000 Sobic001G501600 Sobic001G501600 Sobic004G152300--Sobic001G501600 Sobic010G224400 Sobic010G224400 Sobic004G152300--Sobic010G224400 Sobic004G036800 Sobic004G036800 Sobic004G152300--Sobic004G036800 Sobic010G005000 Sobic010G005000 Sobic004G152300--Sobic010G005000 Sobic002G222200 Sobic002G222200 Sobic004G152300--Sobic002G222200 Sobic005G120500 Sobic005G120500 Sobic004G152300--Sobic005G120500 Sobic010G265900 Sobic010G265900 Sobic004G152300--Sobic010G265900 Sobic006G095200 Sobic006G095200 Sobic004G152300--Sobic006G095200 Sobic010G191301 Sobic010G191301 Sobic010G075100--Sobic010G191301 Sobic008G182100 Sobic008G182100 Sobic010G075100--Sobic008G182100 Sobic002G332500 Sobic002G332500 Sobic010G075100--Sobic002G332500 Sobic008G070100 Sobic008G070100 Sobic010G075100--Sobic008G070100 Sobic004G316200 Sobic004G316200 Sobic010G075100--Sobic004G316200 Sobic010G258900 Sobic010G258900 Sobic010G075100--Sobic010G258900 Sobic003G330800 Sobic003G330800 Sobic010G075100--Sobic003G330800 Sobic003G179300 Sobic003G179300 Sobic010G075100--Sobic003G179300 Sobic006G144201 Sobic006G144201 Sobic010G075100--Sobic006G144201 Sobic010G225950 Sobic010G225950 Sobic010G110601--Sobic010G225950 Sobic001G129650 Sobic001G129650 Sobic010G110601--Sobic001G129650 Sobic005G071200 Sobic005G071200 Sobic010G110601--Sobic005G071200 Sobic010G136100 Sobic010G136100 Sobic010G110601--Sobic010G136100 Sobic009G019700 Sobic009G019700 Sobic010G110601--Sobic009G019700 Sobic005G148100 Sobic005G148100 Sobic010G110601--Sobic005G148100 Sobic003G415200 Sobic003G415200 Sobic010G110601--Sobic003G415200 Sobic008G181250 Sobic008G181250 Sobic010G110601--Sobic008G181250 Sobic002G133150 Sobic002G133150 Sobic010G110601--Sobic002G133150 Sobic004G128400 Sobic004G128400 Sobic002G182500--Sobic004G128400 Sobic001G342700 Sobic001G342700 Sobic002G182500--Sobic001G342700 Sobic001G343601 Sobic001G343601 Sobic002G182500--Sobic001G343601 Sobic002G182400 Sobic002G182400 Sobic002G182500--Sobic002G182400 Sobic002G182500--Sobic009G009400 Sobic002G182500--Sobic005G169100 Sobic002G182500--Sobic006G036500 Sobic002G182500--Sobic002G183100 Sobic001G260000 Sobic001G260000 Sobic002G182500--Sobic001G260000 Sobic006G002100--Sobic002G183100 Sobic007G016100 Sobic007G016100 Sobic006G002100--Sobic007G016100 Sobic006G002100--Sobic006G036500 Sobic006G107200 Sobic006G107200 Sobic006G002100--Sobic006G107200 Sobic006G038800 Sobic006G038800 Sobic006G002100--Sobic006G038800 Sobic004G037000 Sobic004G037000 Sobic006G002100--Sobic004G037000 Sobic001G248500 Sobic001G248500 Sobic006G002100--Sobic001G248500 Sobic002G156900 Sobic002G156900 Sobic006G002100--Sobic002G156900 Sobic001G348700 Sobic001G348700 Sobic006G002100--Sobic001G348700 Sobic006G036500--Sobic006G038800 Sobic006G036500--Sobic002G156900 Sobic006G036500--Sobic002G182500 Sobic004G189301 Sobic004G189301 Sobic006G036500--Sobic004G189301 Sobic006G036500--Sobic002G183100 Sobic006G036500--Sobic006G002100 Sobic010G110266 Sobic010G110266 Sobic006G036500--Sobic010G110266 Sobic002G018500 Sobic002G018500 Sobic006G036500--Sobic002G018500 Sobic005G089500 Sobic005G089500 Sobic006G036500--Sobic005G089500 Sobic003G275501 Sobic003G275501 Sobic006G275401--Sobic003G275501 Sobic008G079032 Sobic008G079032 Sobic006G275401--Sobic008G079032 Sobic006G275401--Sobic010G005000 Sobic001G101200 Sobic001G101200 Sobic006G275401--Sobic001G101200 Sobic002G116600 Sobic002G116600 Sobic006G275401--Sobic002G116600 Sobic006G275401--Sobic004G152300 Sobic004G273400 Sobic004G273400 Sobic006G275401--Sobic004G273400 Sobic008G181100 Sobic008G181100 Sobic006G275401--Sobic008G181100 Sobic009G196400 Sobic009G196400 Sobic006G275401--Sobic009G196400 Sobic007G141100 Sobic007G141100 Sobic002G222400--Sobic007G141100 Sobic001G135200 Sobic001G135200 Sobic002G222400--Sobic001G135200 Sobic002G222400--Sobic002G222200 Sobic003G261100 Sobic003G261100 Sobic002G222400--Sobic003G261100 Sobic003G016300 Sobic003G016300 Sobic002G222400--Sobic003G016300 Sobic007G013900 Sobic007G013900 Sobic002G222400--Sobic007G013900 Sobic003G237400 Sobic003G237400 Sobic002G222400--Sobic003G237400 Sobic006G153200 Sobic006G153200 Sobic002G222400--Sobic006G153200 Sobic010G216400 Sobic010G216400 Sobic002G222400--Sobic010G216400
Octagon: transcription factors


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