Gene annotation
Transcriptome id Sobic.003G240300.1,Sobic.003G240300.2
Synonym Sb03g029750, BPM6, ATBPM6
Functional annotation ATBPM6, putative
UniProt C5XF93
Pfam PF00917
Panther DB PTHR26379
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G43700 : BTB-POZ and MATH domain 6
RAP-DB (Rice) LOC_Os11g41240.1 : ATBPM6, putative
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G043250 - -
2 Sobic.003G133100 major facilitator superfamily antiporter, putative, expressed -
3 Sobic.004G247700 expressed protein -
4 Sobic.001G365700 OsRhmbd13 - Putative Rhomboid homologue, expressed -
5 Sobic.004G127000 - -
6 Sobic.002G399400 expressed protein -
7 Sobic.002G113200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.004G005700 expressed protein -
9 Sobic.007G138100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
10 Sobic.001G505700 expressed protein -
11 Sobic.007G219500 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed -
12 Sobic.009G125850 - -
13 Sobic.004G173700 SLL1 protein, putative, expressed -
14 Sobic.010G216400 expressed protein -
15 Sobic.008G188400 GNS1/SUR4 membrane family protein, putative, expressed -
16 Sobic.003G137600 CHIT10 - Chitinase family protein precursor, expressed -
17 Sobic.003G335300 E2F-related protein, putative, expressed -
18 Sobic.004G232500 dnaJ homolog subfamily C member 7, putative, expressed K09527: DnaJ homolog subfamily C member 7
19 Sobic.009G069600 NADP-ME(PubMedID : 19549309)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADP-malic enzyme(PubMedID : 26904072)@NADP-dependent malic enzyme(PubMedID : 27016024)@NADP-dependent malic enzyme, chloroplast precursor, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
20 Sobic.003G212000 OsCML12 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML


Gene co-expression network
sample Sobic003G240300 Sobic003G240300 Sobic010G043250 Sobic010G043250 Sobic003G240300--Sobic010G043250 Sobic003G133100 Sobic003G133100 Sobic003G240300--Sobic003G133100 Sobic004G247700 Sobic004G247700 Sobic003G240300--Sobic004G247700 Sobic001G365700 Sobic001G365700 Sobic003G240300--Sobic001G365700 Sobic004G127000 Sobic004G127000 Sobic003G240300--Sobic004G127000 Sobic002G399400 Sobic002G399400 Sobic003G240300--Sobic002G399400 Sobic002G113200 Sobic002G113200 Sobic003G240300--Sobic002G113200 Sobic004G005700 Sobic004G005700 Sobic003G240300--Sobic004G005700 Sobic007G138100 Sobic007G138100 Sobic003G240300--Sobic007G138100 Sobic010G043250--Sobic002G113200 Sobic010G043250--Sobic003G133100 Sobic003G212000 Sobic003G212000 Sobic010G043250--Sobic003G212000 Sobic005G039900 Sobic005G039900 Sobic010G043250--Sobic005G039900 Sobic003G234500 Sobic003G234500 Sobic010G043250--Sobic003G234500 Sobic010G043250--Sobic007G138100 Sobic003G137600 Sobic003G137600 Sobic010G043250--Sobic003G137600 Sobic008G071300 Sobic008G071300 Sobic010G043250--Sobic008G071300 Sobic010G043250--Sobic004G127000 Sobic003G133100--Sobic005G039900 Sobic003G133100--Sobic010G043250 Sobic003G133100--Sobic002G399400 Sobic003G133100--Sobic003G137600 Sobic003G133100--Sobic001G365700 Sobic003G133100--Sobic003G240300 Sobic004G173700 Sobic004G173700 Sobic003G133100--Sobic004G173700 Sobic003G133100--Sobic002G113200 Sobic002G305200 Sobic002G305200 Sobic003G133100--Sobic002G305200 Sobic001G482800 Sobic001G482800 Sobic004G247700--Sobic001G482800 Sobic008G188400 Sobic008G188400 Sobic004G247700--Sobic008G188400 Sobic004G247700--Sobic003G212000 Sobic004G247700--Sobic002G113200 Sobic004G247700--Sobic003G137600 Sobic004G247700--Sobic001G365700 Sobic004G247700--Sobic007G138100 Sobic003G284100 Sobic003G284100 Sobic004G247700--Sobic003G284100 Sobic004G247500 Sobic004G247500 Sobic004G247700--Sobic004G247500 Sobic003G335300 Sobic003G335300 Sobic001G365700--Sobic003G335300 Sobic001G365700--Sobic004G173700 Sobic001G365700--Sobic004G127000 Sobic001G365700--Sobic003G137600 Sobic001G365700--Sobic001G482800 Sobic010G216400 Sobic010G216400 Sobic001G365700--Sobic010G216400 Sobic001G365700--Sobic003G284100 Sobic004G232500 Sobic004G232500 Sobic001G365700--Sobic004G232500 Sobic001G365700--Sobic010G043250 Sobic004G127000--Sobic001G365700 Sobic004G127000--Sobic002G113200 Sobic004G127000--Sobic010G043250 Sobic004G127000--Sobic003G137600 Sobic004G127000--Sobic004G173700 Sobic004G127000--Sobic003G284100 Sobic004G127000--Sobic003G212000 Sobic004G127000--Sobic004G247700 Sobic003G139200 Sobic003G139200 Sobic004G127000--Sobic003G139200 Sobic002G399400--Sobic010G043250 Sobic005G074300 Sobic005G074300 Sobic002G399400--Sobic005G074300 Sobic002G399400--Sobic003G133100 Sobic003G270900 Sobic003G270900 Sobic002G399400--Sobic003G270900 Sobic002G096700 Sobic002G096700 Sobic002G399400--Sobic002G096700 Sobic008G050900 Sobic008G050900 Sobic002G399400--Sobic008G050900 Sobic002G399400--Sobic002G113200 Sobic002G399400--Sobic002G305200 Sobic002G399400--Sobic008G071300 Sobic002G113200--Sobic003G212000 Sobic002G113200--Sobic008G071300 Sobic002G113200--Sobic003G234500 Sobic009G157800 Sobic009G157800 Sobic002G113200--Sobic009G157800 Sobic004G279200 Sobic004G279200 Sobic002G113200--Sobic004G279200 Sobic001G503600 Sobic001G503600 Sobic002G113200--Sobic001G503600 Sobic006G267100 Sobic006G267100 Sobic002G113200--Sobic006G267100 Sobic002G113200--Sobic003G284100 Sobic002G113200--Sobic010G043250 Sobic004G005700--Sobic007G138100 Sobic008G141600 Sobic008G141600 Sobic004G005700--Sobic008G141600 Sobic001G490950 Sobic001G490950 Sobic004G005700--Sobic001G490950 Sobic010G134700 Sobic010G134700 Sobic004G005700--Sobic010G134700 Sobic004G005700--Sobic004G247700 Sobic004G005700--Sobic002G113200 Sobic010G006800 Sobic010G006800 Sobic004G005700--Sobic010G006800 Sobic003G385000 Sobic003G385000 Sobic004G005700--Sobic003G385000 Sobic004G074900 Sobic004G074900 Sobic004G005700--Sobic004G074900 Sobic007G138100--Sobic002G113200 Sobic007G138100--Sobic003G212000 Sobic007G138100--Sobic003G137600 Sobic007G138000 Sobic007G138000 Sobic007G138100--Sobic007G138000 Sobic007G138100--Sobic003G234500 Sobic003G040700 Sobic003G040700 Sobic007G138100--Sobic003G040700 Sobic007G138100--Sobic008G071300 Sobic006G120900 Sobic006G120900 Sobic007G138100--Sobic006G120900 Sobic007G138100--Sobic006G267100
Octagon: transcription factors


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