Gene annotation
Transcriptome id Sobic.003G133100.3,Sobic.003G133100.5,Sobic.003G133100.2,Sobic.003G133100.6,Sobic.003G133100.7,Sobic.003G133100.4
Synonym Sb03g011340, ZIF1
Functional annotation major facilitator superfamily antiporter, putative, expressed
UniProt A0A1W0VX60 , A0A1W0VX67 , A0A1W0VX91 , A0A1W0VX73
Pfam PF07690
Panther DB PTHR23504 PTHR23504:SF25 PTHR23504:SF21 PTHR23504 PTHR23504 PTHR23504:SF21
NCBI CDD KOG2615; Permease of the major facilitator superfamily
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0016021integral component of membrane


Orthologs (automatic annotation)
TAIR AT5G13740 : zinc induced facilitator-like 1,zinc induced facilitator-like 2,zinc induced facilitator 1
RAP-DB (Rice) LOC_Os01g17214.1 : major facilitator superfamily antiporter, putative, expressed
MaizeGDB (Corn) Zm00025a024722 , Zm00025a024156 , Zm00025a005418
Brachypodium KQK03949 , KQK03948
Barley -
Wheat TraesCS5B02G542800 , TraesCS5B02G542800 , TraesCS3A02G395100 , TraesCS5D02G545000 , TraesCS5D02G545000 , TraesCS5D02G545000 , TraesCS5D02G544200 , TraesCS5B02G542900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G039900 expressed protein -
2 Sobic.010G043250 - -
3 Sobic.002G399400 expressed protein -
4 Sobic.003G137600 CHIT10 - Chitinase family protein precursor, expressed -
5 Sobic.001G365700 OsRhmbd13 - Putative Rhomboid homologue, expressed -
6 Sobic.003G240300 ATBPM6, putative -
7 Sobic.004G173700 SLL1 protein, putative, expressed -
8 Sobic.002G113200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.002G305200 expressed protein -
10 Sobic.007G138100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
11 Sobic.003G212000 OsCML12 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
12 Sobic.004G127000 - -
13 Sobic.003G234500 CA(PubMedID : 19549309)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
14 Sobic.003G139200 - -
15 Sobic.006G120900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
16 Sobic.006G039600 expressed protein -
17 Sobic.008G071300 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
18 Sobic.002G228900 RNA recognition motif containing protein, putative, expressed -
19 Sobic.003G284100 expressed protein -
20 Sobic.002G308900 ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e


Gene co-expression network
sample Sobic003G133100 Sobic003G133100 Sobic005G039900 Sobic005G039900 Sobic003G133100--Sobic005G039900 Sobic010G043250 Sobic010G043250 Sobic003G133100--Sobic010G043250 Sobic002G399400 Sobic002G399400 Sobic003G133100--Sobic002G399400 Sobic003G137600 Sobic003G137600 Sobic003G133100--Sobic003G137600 Sobic001G365700 Sobic001G365700 Sobic003G133100--Sobic001G365700 Sobic003G240300 Sobic003G240300 Sobic003G133100--Sobic003G240300 Sobic004G173700 Sobic004G173700 Sobic003G133100--Sobic004G173700 Sobic002G113200 Sobic002G113200 Sobic003G133100--Sobic002G113200 Sobic002G305200 Sobic002G305200 Sobic003G133100--Sobic002G305200 Sobic005G039900--Sobic003G133100 Sobic005G039900--Sobic010G043250 Sobic005G039900--Sobic003G137600 Sobic005G039900--Sobic002G399400 Sobic003G212000 Sobic003G212000 Sobic005G039900--Sobic003G212000 Sobic008G071300 Sobic008G071300 Sobic005G039900--Sobic008G071300 Sobic009G189700 Sobic009G189700 Sobic005G039900--Sobic009G189700 Sobic005G074300 Sobic005G074300 Sobic005G039900--Sobic005G074300 Sobic003G234500 Sobic003G234500 Sobic005G039900--Sobic003G234500 Sobic010G043250--Sobic002G113200 Sobic010G043250--Sobic003G133100 Sobic010G043250--Sobic003G212000 Sobic010G043250--Sobic005G039900 Sobic010G043250--Sobic003G234500 Sobic007G138100 Sobic007G138100 Sobic010G043250--Sobic007G138100 Sobic010G043250--Sobic003G137600 Sobic010G043250--Sobic008G071300 Sobic004G127000 Sobic004G127000 Sobic010G043250--Sobic004G127000 Sobic002G399400--Sobic010G043250 Sobic002G399400--Sobic005G074300 Sobic002G399400--Sobic003G133100 Sobic003G270900 Sobic003G270900 Sobic002G399400--Sobic003G270900 Sobic002G096700 Sobic002G096700 Sobic002G399400--Sobic002G096700 Sobic008G050900 Sobic008G050900 Sobic002G399400--Sobic008G050900 Sobic002G399400--Sobic002G113200 Sobic002G399400--Sobic002G305200 Sobic002G399400--Sobic008G071300 Sobic003G137600--Sobic004G173700 Sobic003G137600--Sobic003G212000 Sobic003G137600--Sobic003G234500 Sobic006G120900 Sobic006G120900 Sobic003G137600--Sobic006G120900 Sobic003G137600--Sobic002G113200 Sobic003G137600--Sobic001G365700 Sobic007G212100 Sobic007G212100 Sobic003G137600--Sobic007G212100 Sobic003G284100 Sobic003G284100 Sobic003G137600--Sobic003G284100 Sobic003G137600--Sobic009G189700 Sobic003G335300 Sobic003G335300 Sobic001G365700--Sobic003G335300 Sobic001G365700--Sobic004G173700 Sobic001G365700--Sobic004G127000 Sobic001G365700--Sobic003G137600 Sobic001G482800 Sobic001G482800 Sobic001G365700--Sobic001G482800 Sobic010G216400 Sobic010G216400 Sobic001G365700--Sobic010G216400 Sobic001G365700--Sobic003G284100 Sobic004G232500 Sobic004G232500 Sobic001G365700--Sobic004G232500 Sobic001G365700--Sobic010G043250 Sobic003G240300--Sobic010G043250 Sobic003G240300--Sobic003G133100 Sobic004G247700 Sobic004G247700 Sobic003G240300--Sobic004G247700 Sobic003G240300--Sobic001G365700 Sobic003G240300--Sobic004G127000 Sobic003G240300--Sobic002G399400 Sobic003G240300--Sobic002G113200 Sobic004G005700 Sobic004G005700 Sobic003G240300--Sobic004G005700 Sobic003G240300--Sobic007G138100 Sobic004G173700--Sobic003G137600 Sobic004G173700--Sobic006G120900 Sobic002G420600 Sobic002G420600 Sobic004G173700--Sobic002G420600 Sobic001G387200 Sobic001G387200 Sobic004G173700--Sobic001G387200 Sobic004G173700--Sobic001G365700 Sobic003G129900 Sobic003G129900 Sobic004G173700--Sobic003G129900 Sobic004G173700--Sobic007G212100 Sobic001G303900 Sobic001G303900 Sobic004G173700--Sobic001G303900 Sobic008G018300 Sobic008G018300 Sobic004G173700--Sobic008G018300 Sobic002G113200--Sobic003G212000 Sobic002G113200--Sobic008G071300 Sobic002G113200--Sobic003G234500 Sobic009G157800 Sobic009G157800 Sobic002G113200--Sobic009G157800 Sobic004G279200 Sobic004G279200 Sobic002G113200--Sobic004G279200 Sobic001G503600 Sobic001G503600 Sobic002G113200--Sobic001G503600 Sobic006G267100 Sobic006G267100 Sobic002G113200--Sobic006G267100 Sobic002G113200--Sobic003G284100 Sobic002G113200--Sobic010G043250 Sobic002G305200--Sobic003G212000 Sobic002G305200--Sobic008G071300 Sobic003G351200 Sobic003G351200 Sobic002G305200--Sobic003G351200 Sobic002G305200--Sobic003G137600 Sobic002G305200--Sobic003G234500 Sobic008G098164 Sobic008G098164 Sobic002G305200--Sobic008G098164 Sobic003G441000 Sobic003G441000 Sobic002G305200--Sobic003G441000 Sobic003G023732 Sobic003G023732 Sobic002G305200--Sobic003G023732 Sobic006G197900 Sobic006G197900 Sobic002G305200--Sobic006G197900
Octagon: transcription factors


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