Gene annotation
Transcriptome id Sobic.006G039600.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6PJY0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g28390.1 : expressed protein
MaizeGDB (Corn) Zm00025a012535
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G273100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@jmjC domain containing protein, expressed -
2 Sobic.005G058800 plant neutral invertase domain containing protein, expressed -
3 Sobic.001G118300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@GLTP domain containing protein, putative, expressed -
4 Sobic.009G069600 NADP-ME(PubMedID : 19549309)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADP-malic enzyme(PubMedID : 26904072)@NADP-dependent malic enzyme(PubMedID : 27016024)@NADP-dependent malic enzyme, chloroplast precursor, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
5 Sobic.010G031000 expressed protein -
6 Sobic.007G016100 - -
7 Sobic.001G508466 - -
8 Sobic.009G128700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
9 Sobic.001G533400 major facilitator superfamily domain-containing protein 5, putative, expressed -
10 Sobic.001G339700 expressed protein -
11 Sobic.001G513300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein-methionine-S-oxide reductase, putative, expressed -
12 Sobic.010G001900 Long chain acyl-CoA oxidase(PubMedID : 18985313)@acyl-coenzyme A oxidase 1.2, peroxisomal, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
13 Sobic.008G112600 guanylate kinase, putative, expressed K00942: E2.7.4.8, guanylate kinase
14 Sobic.001G348700 - -
15 Sobic.003G191500 protein transport protein Sec61 subunit beta, putative, expressed K09481: SEC61B, protein transport protein SEC61 subunit beta
16 Sobic.010G204100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450 71D7, putative, expressed -
17 Sobic.002G199650 - -
18 Sobic.003G240600 VQ domain containing protein, putative, expressed -
19 Sobic.005G101800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
20 Sobic.004G030501 - -


Gene co-expression network
sample Sobic006G039600 Sobic006G039600 Sobic004G273100 Sobic004G273100 Sobic006G039600--Sobic004G273100 Sobic005G058800 Sobic005G058800 Sobic006G039600--Sobic005G058800 Sobic001G118300 Sobic001G118300 Sobic006G039600--Sobic001G118300 Sobic009G069600 Sobic009G069600 Sobic006G039600--Sobic009G069600 Sobic010G031000 Sobic010G031000 Sobic006G039600--Sobic010G031000 Sobic007G016100 Sobic007G016100 Sobic006G039600--Sobic007G016100 Sobic001G508466 Sobic001G508466 Sobic006G039600--Sobic001G508466 Sobic009G128700 Sobic009G128700 Sobic006G039600--Sobic009G128700 Sobic001G533400 Sobic001G533400 Sobic006G039600--Sobic001G533400 Sobic004G273100--Sobic006G039600 Sobic009G120000 Sobic009G120000 Sobic004G273100--Sobic009G120000 Sobic002G090200 Sobic002G090200 Sobic004G273100--Sobic002G090200 Sobic004G273100--Sobic001G533400 Sobic004G030501 Sobic004G030501 Sobic004G273100--Sobic004G030501 Sobic010G001900 Sobic010G001900 Sobic004G273100--Sobic010G001900 Sobic008G112600 Sobic008G112600 Sobic004G273100--Sobic008G112600 Sobic002G267500 Sobic002G267500 Sobic004G273100--Sobic002G267500 Sobic003G227300 Sobic003G227300 Sobic004G273100--Sobic003G227300 Sobic010G209900 Sobic010G209900 Sobic005G058800--Sobic010G209900 Sobic001G339700 Sobic001G339700 Sobic005G058800--Sobic001G339700 Sobic005G084600 Sobic005G084600 Sobic005G058800--Sobic005G084600 Sobic004G176600 Sobic004G176600 Sobic005G058800--Sobic004G176600 Sobic002G375400 Sobic002G375400 Sobic005G058800--Sobic002G375400 Sobic005G058800--Sobic001G533400 Sobic001G243600 Sobic001G243600 Sobic005G058800--Sobic001G243600 Sobic005G058800--Sobic008G112600 Sobic009G106800 Sobic009G106800 Sobic005G058800--Sobic009G106800 Sobic005G019100 Sobic005G019100 Sobic001G118300--Sobic005G019100 Sobic001G118300--Sobic006G039600 Sobic004G256700 Sobic004G256700 Sobic001G118300--Sobic004G256700 Sobic010G262300 Sobic010G262300 Sobic001G118300--Sobic010G262300 Sobic003G196600 Sobic003G196600 Sobic001G118300--Sobic003G196600 Sobic001G118300--Sobic010G031000 Sobic004G159400 Sobic004G159400 Sobic001G118300--Sobic004G159400 Sobic004G159000 Sobic004G159000 Sobic001G118300--Sobic004G159000 Sobic003G273000 Sobic003G273000 Sobic001G118300--Sobic003G273000 Sobic009G069600--Sobic010G031000 Sobic010G216400 Sobic010G216400 Sobic009G069600--Sobic010G216400 Sobic009G069600--Sobic003G273000 Sobic009G069600--Sobic001G508466 Sobic004G232500 Sobic004G232500 Sobic009G069600--Sobic004G232500 Sobic009G069600--Sobic004G159400 Sobic001G197000 Sobic001G197000 Sobic009G069600--Sobic001G197000 Sobic001G365700 Sobic001G365700 Sobic009G069600--Sobic001G365700 Sobic003G335300 Sobic003G335300 Sobic009G069600--Sobic003G335300 Sobic010G031000--Sobic009G069600 Sobic010G031000--Sobic003G273000 Sobic004G260200 Sobic004G260200 Sobic010G031000--Sobic004G260200 Sobic010G031000--Sobic001G197000 Sobic001G404800 Sobic001G404800 Sobic010G031000--Sobic001G404800 Sobic001G047800 Sobic001G047800 Sobic010G031000--Sobic001G047800 Sobic010G031000--Sobic001G508466 Sobic003G215700 Sobic003G215700 Sobic010G031000--Sobic003G215700 Sobic010G031000--Sobic010G216400 Sobic006G002100 Sobic006G002100 Sobic007G016100--Sobic006G002100 Sobic010G084700 Sobic010G084700 Sobic007G016100--Sobic010G084700 Sobic004G221500 Sobic004G221500 Sobic007G016100--Sobic004G221500 Sobic001G487300 Sobic001G487300 Sobic007G016100--Sobic001G487300 Sobic001G513300 Sobic001G513300 Sobic007G016100--Sobic001G513300 Sobic004G037000 Sobic004G037000 Sobic007G016100--Sobic004G037000 Sobic002G183100 Sobic002G183100 Sobic007G016100--Sobic002G183100 Sobic004G071650 Sobic004G071650 Sobic007G016100--Sobic004G071650 Sobic001G348700 Sobic001G348700 Sobic007G016100--Sobic001G348700 Sobic004G146000 Sobic004G146000 Sobic001G508466--Sobic004G146000 Sobic001G508466--Sobic004G159400 Sobic004G205100 Sobic004G205100 Sobic001G508466--Sobic004G205100 Sobic002G418400 Sobic002G418400 Sobic001G508466--Sobic002G418400 Sobic005G099000 Sobic005G099000 Sobic001G508466--Sobic005G099000 Sobic001G108200 Sobic001G108200 Sobic001G508466--Sobic001G108200 Sobic002G355100 Sobic002G355100 Sobic001G508466--Sobic002G355100 Sobic009G234100 Sobic009G234100 Sobic001G508466--Sobic009G234100 Sobic004G208700 Sobic004G208700 Sobic001G508466--Sobic004G208700 Sobic010G084400 Sobic010G084400 Sobic009G128700--Sobic010G084400 Sobic003G252800 Sobic003G252800 Sobic009G128700--Sobic003G252800 Sobic003G426300 Sobic003G426300 Sobic009G128700--Sobic003G426300 Sobic005G101800 Sobic005G101800 Sobic009G128700--Sobic005G101800 Sobic010G239300 Sobic010G239300 Sobic009G128700--Sobic010G239300 Sobic002G415100 Sobic002G415100 Sobic009G128700--Sobic002G415100 Sobic003G426000 Sobic003G426000 Sobic009G128700--Sobic003G426000 Sobic006G099900 Sobic006G099900 Sobic009G128700--Sobic006G099900 Sobic003G280200 Sobic003G280200 Sobic009G128700--Sobic003G280200 Sobic001G533400--Sobic001G339700 Sobic001G533400--Sobic010G001900 Sobic001G119100 Sobic001G119100 Sobic001G533400--Sobic001G119100 Sobic002G201600 Sobic002G201600 Sobic001G533400--Sobic002G201600 Sobic008G025600 Sobic008G025600 Sobic001G533400--Sobic008G025600 Sobic001G533400--Sobic004G205100 Sobic005G091500 Sobic005G091500 Sobic001G533400--Sobic005G091500 Sobic001G119000 Sobic001G119000 Sobic001G533400--Sobic001G119000 Sobic001G252300 Sobic001G252300 Sobic001G533400--Sobic001G252300
Octagon: transcription factors


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