Gene annotation
Transcriptome id Sobic.008G112600.1,Sobic.008G112600.2
Synonym GK-1, AGK1, Sb08g016650
Functional annotation guanylate kinase, putative, expressed
UniProt A0A1B6PCY5
Pfam PF00625
Panther DB PTHR23117 PTHR23117:SF13
NCBI CDD KOG0707; Guanylate kinase
KEGG Orthology K00942; E2.7.4.8, guanylate kinase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G57550 : guanylate kinase
RAP-DB (Rice) LOC_Os12g33100.1 : guanylate kinase, putative, expressed
MaizeGDB (Corn) Zm00025a054408
Brachypodium KQJ86554 , KQJ86555
Barley HORVU5Hr1G027570.8 , HORVU5Hr1G027570.9 , HORVU5Hr1G027570.1 , HORVU5Hr1G027570.3 , HORVU5Hr1G027570.4 , HORVU5Hr1G027570.2 , HORVU5Hr1G027570.6 , HORVU5Hr1G027570.7 , HORVU5Hr1G027570.5 , HORVU5Hr1G027570.12 , HORVU5Hr1G027570.10 , HORVU5Hr1G027570.11
Wheat TraesCS5A02G100300 , TraesCS5B02G105400 , TraesCS5D02G112800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G072300 triosephosphate isomerase(PubMedID : 27016024)@triosephosphate isomerase, cytosolic, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)
2 Sobic.009G179900 OsCML9 - Calmodulin-related calcium sensor protein, expressed K02183: calmodulin
3 Sobic.004G334400 ANTH, putative, expressed -
4 Sobic.005G084600 ARGOS, putative, expressed -
5 Sobic.007G115100 hydrolase, NUDIX family, domain containing protein, expressed -
6 Sobic.001G082600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bHelix-loop-helix transcription factor, putative, expressed -
7 Sobic.004G205100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K00134: GAPDH, glyceraldehyde 3-phosphate dehydrogenase
8 Sobic.004G269700 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K04708: 3-dehydrosphinganine reductase
9 Sobic.002G187500 hypoxia-responsive family protein, putative, expressed -
10 Sobic.004G176600 no apical meristem protein, putative, expressed -
11 Sobic.010G023800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@3-phosphoshikimate 1-carboxyvinyltransferase, chloroplast precursor, putative, expressed K00800: 3-phosphoshikimate 1-carboxyvinyltransferase
12 Sobic.005G058800 plant neutral invertase domain containing protein, expressed -
13 Sobic.003G155400 miro, putative, expressed K07953: GTP-binding protein SAR1
14 Sobic.001G350600 cytochrome c oxidase subunit, putative, expressed K02267: cytochrome c oxidase subunit 6b
15 Sobic.003G352300 triosephosphate isomerase(PubMedID : 27016024)@triosephosphate isomerase, cytosolic, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)
16 Sobic.006G044100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
17 Sobic.003G255200 expressed protein -
18 Sobic.003G357100 phosphatidic acid phosphatase-related, putative, expressed -
19 Sobic.001G418900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.002G418400 ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed -


Gene co-expression network
sample Sobic008G112600 Sobic008G112600 Sobic003G072300 Sobic003G072300 Sobic008G112600--Sobic003G072300 Sobic009G179900 Sobic009G179900 Sobic008G112600--Sobic009G179900 Sobic004G334400 Sobic004G334400 Sobic008G112600--Sobic004G334400 Sobic005G084600 Sobic005G084600 Sobic008G112600--Sobic005G084600 Sobic007G115100 Sobic007G115100 Sobic008G112600--Sobic007G115100 Sobic001G082600 Sobic001G082600 Sobic008G112600--Sobic001G082600 Sobic004G205100 Sobic004G205100 Sobic008G112600--Sobic004G205100 Sobic004G269700 Sobic004G269700 Sobic008G112600--Sobic004G269700 Sobic002G187500 Sobic002G187500 Sobic008G112600--Sobic002G187500 Sobic002G081600 Sobic002G081600 Sobic003G072300--Sobic002G081600 Sobic003G072300--Sobic004G205100 Sobic003G072300--Sobic002G187500 Sobic003G209000 Sobic003G209000 Sobic003G072300--Sobic003G209000 Sobic002G190900 Sobic002G190900 Sobic003G072300--Sobic002G190900 Sobic006G213000 Sobic006G213000 Sobic003G072300--Sobic006G213000 Sobic010G204500 Sobic010G204500 Sobic003G072300--Sobic010G204500 Sobic003G155400 Sobic003G155400 Sobic003G072300--Sobic003G155400 Sobic002G379500 Sobic002G379500 Sobic003G072300--Sobic002G379500 Sobic008G106700 Sobic008G106700 Sobic009G179900--Sobic008G106700 Sobic003G062600 Sobic003G062600 Sobic009G179900--Sobic003G062600 Sobic003G255200 Sobic003G255200 Sobic009G179900--Sobic003G255200 Sobic006G044100 Sobic006G044100 Sobic009G179900--Sobic006G044100 Sobic004G176600 Sobic004G176600 Sobic009G179900--Sobic004G176600 Sobic009G179900--Sobic001G082600 Sobic004G046200 Sobic004G046200 Sobic009G179900--Sobic004G046200 Sobic002G034800 Sobic002G034800 Sobic009G179900--Sobic002G034800 Sobic003G417800 Sobic003G417800 Sobic009G179900--Sobic003G417800 Sobic007G087200 Sobic007G087200 Sobic004G334400--Sobic007G087200 Sobic010G239500 Sobic010G239500 Sobic004G334400--Sobic010G239500 Sobic006G092500 Sobic006G092500 Sobic004G334400--Sobic006G092500 Sobic004G334400--Sobic004G046200 Sobic004G334400--Sobic001G082600 Sobic005G093000 Sobic005G093000 Sobic004G334400--Sobic005G093000 Sobic001G389000 Sobic001G389000 Sobic004G334400--Sobic001G389000 Sobic002G287100 Sobic002G287100 Sobic004G334400--Sobic002G287100 Sobic010G195500 Sobic010G195500 Sobic004G334400--Sobic010G195500 Sobic005G084600--Sobic004G176600 Sobic001G339700 Sobic001G339700 Sobic005G084600--Sobic001G339700 Sobic009G120000 Sobic009G120000 Sobic005G084600--Sobic009G120000 Sobic008G032100 Sobic008G032100 Sobic005G084600--Sobic008G032100 Sobic005G206601 Sobic005G206601 Sobic005G084600--Sobic005G206601 Sobic002G375400 Sobic002G375400 Sobic005G084600--Sobic002G375400 Sobic010G009300 Sobic010G009300 Sobic005G084600--Sobic010G009300 Sobic010G185000 Sobic010G185000 Sobic005G084600--Sobic010G185000 Sobic005G084600--Sobic003G417800 Sobic001G418900 Sobic001G418900 Sobic007G115100--Sobic001G418900 Sobic007G115100--Sobic004G269700 Sobic007G115100--Sobic003G155400 Sobic001G505500 Sobic001G505500 Sobic007G115100--Sobic001G505500 Sobic010G153100 Sobic010G153100 Sobic007G115100--Sobic010G153100 Sobic001G342200 Sobic001G342200 Sobic007G115100--Sobic001G342200 Sobic010G023800 Sobic010G023800 Sobic007G115100--Sobic010G023800 Sobic010G154700 Sobic010G154700 Sobic007G115100--Sobic010G154700 Sobic004G138800 Sobic004G138800 Sobic007G115100--Sobic004G138800 Sobic003G079400 Sobic003G079400 Sobic001G082600--Sobic003G079400 Sobic001G082600--Sobic004G046200 Sobic001G082600--Sobic006G044100 Sobic003G011600 Sobic003G011600 Sobic001G082600--Sobic003G011600 Sobic001G082600--Sobic003G255200 Sobic007G215900 Sobic007G215900 Sobic001G082600--Sobic007G215900 Sobic001G082600--Sobic008G106700 Sobic001G082600--Sobic004G176600 Sobic001G082600--Sobic009G179900 Sobic003G352300 Sobic003G352300 Sobic004G205100--Sobic003G352300 Sobic004G205100--Sobic006G092500 Sobic009G183400 Sobic009G183400 Sobic004G205100--Sobic009G183400 Sobic009G159400 Sobic009G159400 Sobic004G205100--Sobic009G159400 Sobic001G476500 Sobic001G476500 Sobic004G205100--Sobic001G476500 Sobic007G184600 Sobic007G184600 Sobic004G205100--Sobic007G184600 Sobic005G091500 Sobic005G091500 Sobic004G205100--Sobic005G091500 Sobic006G099900 Sobic006G099900 Sobic004G205100--Sobic006G099900 Sobic004G205100--Sobic003G417800 Sobic004G269700--Sobic007G115100 Sobic004G269700--Sobic010G023800 Sobic004G269700--Sobic001G418900 Sobic004G269700--Sobic010G195500 Sobic003G357100 Sobic003G357100 Sobic004G269700--Sobic003G357100 Sobic001G224400 Sobic001G224400 Sobic004G269700--Sobic001G224400 Sobic008G129400 Sobic008G129400 Sobic004G269700--Sobic008G129400 Sobic004G269700--Sobic001G505500 Sobic004G269700--Sobic010G153100 Sobic002G187500--Sobic010G009300 Sobic003G285800 Sobic003G285800 Sobic002G187500--Sobic003G285800 Sobic002G187500--Sobic002G190900 Sobic002G046100 Sobic002G046100 Sobic002G187500--Sobic002G046100 Sobic002G187500--Sobic003G072300 Sobic001G177800 Sobic001G177800 Sobic002G187500--Sobic001G177800 Sobic002G187500--Sobic002G081600 Sobic001G281400 Sobic001G281400 Sobic002G187500--Sobic001G281400 Sobic003G393700 Sobic003G393700 Sobic002G187500--Sobic003G393700
Octagon: transcription factors


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