Gene annotation
Transcriptome id Sobic.005G058800.1,Sobic.005G058800.3
Synonym CINV2, Sb05g004770
Functional annotation plant neutral invertase domain containing protein, expressed
UniProt C5Y625 , A0A1Z5RGV9
Pfam PF12899
Panther DB PTHR31916:SF5 PTHR31916 PTHR31916 PTHR31916:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G09510 : cytosolic invertase 2
RAP-DB (Rice) LOC_Os11g07440.1,LOC_Os11g07440.3 : plant neutral invertase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a012854 , Zm00025a033983
Brachypodium KQJ89255 , KQJ89256
Barley HORVU4Hr1G019410.6 , HORVU4Hr1G019410.5 , HORVU4Hr1G019410.9 , HORVU4Hr1G019410.8 , HORVU4Hr1G019410.2 , HORVU4Hr1G019410.3 , HORVU4Hr1G019410.1 , HORVU4Hr1G019410.7 , HORVU4Hr1G019410.4
Wheat TraesCS4B02G093500 , TraesCS4A02G222900 , TraesCS4D02G090300
Populus PNT50197


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G209900 phospholipase D. Active site motif family protein, expressed K16860: phospholipase D3/4
2 Sobic.001G339700 expressed protein -
3 Sobic.005G084600 ARGOS, putative, expressed -
4 Sobic.004G176600 no apical meristem protein, putative, expressed -
5 Sobic.002G375400 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
6 Sobic.001G533400 major facilitator superfamily domain-containing protein 5, putative, expressed -
7 Sobic.001G243600 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
8 Sobic.008G112600 guanylate kinase, putative, expressed K00942: E2.7.4.8, guanylate kinase
9 Sobic.009G106800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
10 Sobic.003G436800 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.010G052700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA20 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
12 Sobic.005G092900 - -
13 Sobic.010G009300 6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed K00033: PGD, gnd, 6-phosphogluconate dehydrogenase
14 Sobic.008G032100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.001G025300 hydrolase, alpha/beta fold family domain containing protein, expressed -
16 Sobic.001G100700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@PIII5 - Proteinase inhibitor II family protein precursor, expressed -
17 Sobic.005G213200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein kinase family protein, putative, expressed -
18 Sobic.009G128700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
19 Sobic.001G444400 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.006G039600 expressed protein -


Gene co-expression network
sample Sobic005G058800 Sobic005G058800 Sobic010G209900 Sobic010G209900 Sobic005G058800--Sobic010G209900 Sobic001G339700 Sobic001G339700 Sobic005G058800--Sobic001G339700 Sobic005G084600 Sobic005G084600 Sobic005G058800--Sobic005G084600 Sobic004G176600 Sobic004G176600 Sobic005G058800--Sobic004G176600 Sobic002G375400 Sobic002G375400 Sobic005G058800--Sobic002G375400 Sobic001G533400 Sobic001G533400 Sobic005G058800--Sobic001G533400 Sobic001G243600 Sobic001G243600 Sobic005G058800--Sobic001G243600 Sobic008G112600 Sobic008G112600 Sobic005G058800--Sobic008G112600 Sobic009G106800 Sobic009G106800 Sobic005G058800--Sobic009G106800 Sobic010G209900--Sobic005G058800 Sobic010G209900--Sobic001G339700 Sobic001G025300 Sobic001G025300 Sobic010G209900--Sobic001G025300 Sobic010G209900--Sobic005G084600 Sobic001G100700 Sobic001G100700 Sobic010G209900--Sobic001G100700 Sobic002G312900 Sobic002G312900 Sobic010G209900--Sobic002G312900 Sobic009G120000 Sobic009G120000 Sobic010G209900--Sobic009G120000 Sobic010G209900--Sobic001G533400 Sobic001G444400 Sobic001G444400 Sobic010G209900--Sobic001G444400 Sobic001G339700--Sobic001G533400 Sobic001G317200 Sobic001G317200 Sobic001G339700--Sobic001G317200 Sobic007G145600 Sobic007G145600 Sobic001G339700--Sobic007G145600 Sobic010G084400 Sobic010G084400 Sobic001G339700--Sobic010G084400 Sobic003G252800 Sobic003G252800 Sobic001G339700--Sobic003G252800 Sobic006G099900 Sobic006G099900 Sobic001G339700--Sobic006G099900 Sobic008G025600 Sobic008G025600 Sobic001G339700--Sobic008G025600 Sobic005G101800 Sobic005G101800 Sobic001G339700--Sobic005G101800 Sobic001G339700--Sobic005G084600 Sobic005G084600--Sobic004G176600 Sobic005G084600--Sobic001G339700 Sobic005G084600--Sobic009G120000 Sobic008G032100 Sobic008G032100 Sobic005G084600--Sobic008G032100 Sobic005G206601 Sobic005G206601 Sobic005G084600--Sobic005G206601 Sobic005G084600--Sobic002G375400 Sobic010G009300 Sobic010G009300 Sobic005G084600--Sobic010G009300 Sobic010G185000 Sobic010G185000 Sobic005G084600--Sobic010G185000 Sobic003G417800 Sobic003G417800 Sobic005G084600--Sobic003G417800 Sobic006G044100 Sobic006G044100 Sobic004G176600--Sobic006G044100 Sobic004G176600--Sobic002G375400 Sobic004G107700 Sobic004G107700 Sobic004G176600--Sobic004G107700 Sobic004G176600--Sobic005G084600 Sobic003G255200 Sobic003G255200 Sobic004G176600--Sobic003G255200 Sobic003G437200 Sobic003G437200 Sobic004G176600--Sobic003G437200 Sobic004G176600--Sobic003G417800 Sobic004G176600--Sobic010G185000 Sobic004G348400 Sobic004G348400 Sobic004G176600--Sobic004G348400 Sobic002G375400--Sobic004G176600 Sobic002G375400--Sobic004G107700 Sobic002G375400--Sobic010G185000 Sobic002G375400--Sobic005G206601 Sobic002G375400--Sobic003G437200 Sobic009G072900 Sobic009G072900 Sobic002G375400--Sobic009G072900 Sobic002G375400--Sobic003G417800 Sobic001G403000 Sobic001G403000 Sobic002G375400--Sobic001G403000 Sobic002G375400--Sobic004G348400 Sobic001G533400--Sobic001G339700 Sobic010G001900 Sobic010G001900 Sobic001G533400--Sobic010G001900 Sobic001G119100 Sobic001G119100 Sobic001G533400--Sobic001G119100 Sobic002G201600 Sobic002G201600 Sobic001G533400--Sobic002G201600 Sobic001G533400--Sobic008G025600 Sobic004G205100 Sobic004G205100 Sobic001G533400--Sobic004G205100 Sobic005G091500 Sobic005G091500 Sobic001G533400--Sobic005G091500 Sobic001G119000 Sobic001G119000 Sobic001G533400--Sobic001G119000 Sobic001G252300 Sobic001G252300 Sobic001G533400--Sobic001G252300 Sobic004G273400 Sobic004G273400 Sobic001G243600--Sobic004G273400 Sobic005G213200 Sobic005G213200 Sobic001G243600--Sobic005G213200 Sobic001G243500 Sobic001G243500 Sobic001G243600--Sobic001G243500 Sobic001G243600--Sobic001G100700 Sobic001G243600--Sobic009G120000 Sobic001G243600--Sobic002G375400 Sobic001G243600--Sobic009G106800 Sobic001G243600--Sobic005G084600 Sobic001G243600--Sobic001G444400 Sobic003G072300 Sobic003G072300 Sobic008G112600--Sobic003G072300 Sobic009G179900 Sobic009G179900 Sobic008G112600--Sobic009G179900 Sobic004G334400 Sobic004G334400 Sobic008G112600--Sobic004G334400 Sobic008G112600--Sobic005G084600 Sobic007G115100 Sobic007G115100 Sobic008G112600--Sobic007G115100 Sobic001G082600 Sobic001G082600 Sobic008G112600--Sobic001G082600 Sobic008G112600--Sobic004G205100 Sobic004G269700 Sobic004G269700 Sobic008G112600--Sobic004G269700 Sobic002G187500 Sobic002G187500 Sobic008G112600--Sobic002G187500 Sobic009G106800--Sobic001G444400 Sobic009G106800--Sobic010G084400 Sobic009G196400 Sobic009G196400 Sobic009G106800--Sobic009G196400 Sobic009G106800--Sobic001G100700 Sobic004G111800 Sobic004G111800 Sobic009G106800--Sobic004G111800 Sobic009G106800--Sobic005G213200 Sobic009G106800--Sobic001G243600 Sobic009G106800--Sobic003G252800 Sobic006G153100 Sobic006G153100 Sobic009G106800--Sobic006G153100
Octagon: transcription factors


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