Gene annotation
Transcriptome id Sobic.001G118300.1
Synonym Sb01g010440
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
GLTP domain containing protein, putative, expressed
UniProt C5WN45
Pfam PF08718
Panther DB PTHR10219 PTHR10219:SF28
NCBI CDD KOG4189; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0017089; glycolipid transfer activity GO:0005737cytoplasm


Orthologs (automatic annotation)
TAIR AT4G39670 : Glycolipid transfer protein (GLTP) family protein
RAP-DB (Rice) LOC_Os03g50280.1 : GLTP domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a007828 , Zm00025a017005
Brachypodium KQK13606
Barley HORVU4Hr1G007360.2 , HORVU4Hr1G007360.3 , HORVU4Hr1G007360.1 , HORVU4Hr1G007360.6 , HORVU4Hr1G007360.7 , HORVU4Hr1G007360.4 , HORVU4Hr1G007360.5 , HORVU4Hr1G007360.8
Wheat TraesCS4A02G268800 , TraesCS4D02G045300 , TraesCS4B02G045400
Populus -


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cDNA sequences
Sobic.001G118300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G019100 TRAF-type zinc finger family protein, expressed -
2 Sobic.006G039600 expressed protein -
3 Sobic.004G256700 ZAC, putative, expressed K12486: stromal membrane-associated protein
4 Sobic.010G262300 coiled-coil domain-containing protein 90A, mitochondrial precursor, putative, expressed -
5 Sobic.003G196600 expressed protein -
6 Sobic.010G031000 expressed protein -
7 Sobic.004G159400 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
8 Sobic.004G159000 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
9 Sobic.003G273000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@hydrolase, putative, expressed K14664: IAA-amino acid hydrolase
10 Sobic.009G014700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cysteine-rich repeat secretory protein 55 precursor, putative, expressed -
11 Sobic.006G118400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@gibberellin 20 oxidase 2, putative, expressed -
12 Sobic.002G159300 ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
13 Sobic.004G170400 ubiquinol-cytochrome C reductase hinge protein, putative, expressed K00416: QCR6, ubiquinol-cytochrome c reductase subunit 6
14 Sobic.001G508466 - -
15 Sobic.003G129900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
16 Sobic.004G339300 ABC transporter, ATP-binding protein, putative, expressed K12608: CCR4-NOT complex subunit CAF16
17 Sobic.001G513300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein-methionine-S-oxide reductase, putative, expressed -
18 Sobic.001G074700 cytochrome c oxidase-related, putative, expressed K02266: cytochrome c oxidase subunit 6a
19 Sobic.002G423000 zinc finger family protein, putative, expressed -
20 Sobic.004G030501 - -


Gene co-expression network
sample Sobic001G118300 Sobic001G118300 Sobic005G019100 Sobic005G019100 Sobic001G118300--Sobic005G019100 Sobic006G039600 Sobic006G039600 Sobic001G118300--Sobic006G039600 Sobic004G256700 Sobic004G256700 Sobic001G118300--Sobic004G256700 Sobic010G262300 Sobic010G262300 Sobic001G118300--Sobic010G262300 Sobic003G196600 Sobic003G196600 Sobic001G118300--Sobic003G196600 Sobic010G031000 Sobic010G031000 Sobic001G118300--Sobic010G031000 Sobic004G159400 Sobic004G159400 Sobic001G118300--Sobic004G159400 Sobic004G159000 Sobic004G159000 Sobic001G118300--Sobic004G159000 Sobic003G273000 Sobic003G273000 Sobic001G118300--Sobic003G273000 Sobic003G129900 Sobic003G129900 Sobic005G019100--Sobic003G129900 Sobic005G019100--Sobic004G256700 Sobic001G387200 Sobic001G387200 Sobic005G019100--Sobic001G387200 Sobic006G120900 Sobic006G120900 Sobic005G019100--Sobic006G120900 Sobic004G173700 Sobic004G173700 Sobic005G019100--Sobic004G173700 Sobic001G518500 Sobic001G518500 Sobic005G019100--Sobic001G518500 Sobic001G408400 Sobic001G408400 Sobic005G019100--Sobic001G408400 Sobic003G137600 Sobic003G137600 Sobic005G019100--Sobic003G137600 Sobic007G219500 Sobic007G219500 Sobic005G019100--Sobic007G219500 Sobic004G273100 Sobic004G273100 Sobic006G039600--Sobic004G273100 Sobic005G058800 Sobic005G058800 Sobic006G039600--Sobic005G058800 Sobic006G039600--Sobic001G118300 Sobic009G069600 Sobic009G069600 Sobic006G039600--Sobic009G069600 Sobic006G039600--Sobic010G031000 Sobic007G016100 Sobic007G016100 Sobic006G039600--Sobic007G016100 Sobic001G508466 Sobic001G508466 Sobic006G039600--Sobic001G508466 Sobic009G128700 Sobic009G128700 Sobic006G039600--Sobic009G128700 Sobic001G533400 Sobic001G533400 Sobic006G039600--Sobic001G533400 Sobic004G256700--Sobic003G129900 Sobic004G256700--Sobic005G019100 Sobic004G256700--Sobic001G387200 Sobic004G256700--Sobic006G120900 Sobic004G093600 Sobic004G093600 Sobic004G256700--Sobic004G093600 Sobic004G256700--Sobic003G196600 Sobic003G274200 Sobic003G274200 Sobic004G256700--Sobic003G274200 Sobic004G256700--Sobic004G173700 Sobic004G256700--Sobic001G518500 Sobic006G239300 Sobic006G239300 Sobic010G262300--Sobic006G239300 Sobic001G308700 Sobic001G308700 Sobic010G262300--Sobic001G308700 Sobic002G362000 Sobic002G362000 Sobic010G262300--Sobic002G362000 Sobic004G030501 Sobic004G030501 Sobic010G262300--Sobic004G030501 Sobic001G148700 Sobic001G148700 Sobic010G262300--Sobic001G148700 Sobic004G123000 Sobic004G123000 Sobic010G262300--Sobic004G123000 Sobic006G118400 Sobic006G118400 Sobic010G262300--Sobic006G118400 Sobic001G067601 Sobic001G067601 Sobic010G262300--Sobic001G067601 Sobic001G513300 Sobic001G513300 Sobic010G262300--Sobic001G513300 Sobic003G196600--Sobic004G159000 Sobic003G196600--Sobic004G256700 Sobic003G340700 Sobic003G340700 Sobic003G196600--Sobic003G340700 Sobic009G112900 Sobic009G112900 Sobic003G196600--Sobic009G112900 Sobic004G030000 Sobic004G030000 Sobic003G196600--Sobic004G030000 Sobic004G039400 Sobic004G039400 Sobic003G196600--Sobic004G039400 Sobic003G196600--Sobic001G518500 Sobic003G196600--Sobic005G019100 Sobic008G175100 Sobic008G175100 Sobic003G196600--Sobic008G175100 Sobic010G031000--Sobic009G069600 Sobic010G031000--Sobic003G273000 Sobic004G260200 Sobic004G260200 Sobic010G031000--Sobic004G260200 Sobic001G197000 Sobic001G197000 Sobic010G031000--Sobic001G197000 Sobic001G404800 Sobic001G404800 Sobic010G031000--Sobic001G404800 Sobic001G047800 Sobic001G047800 Sobic010G031000--Sobic001G047800 Sobic010G031000--Sobic001G508466 Sobic003G215700 Sobic003G215700 Sobic010G031000--Sobic003G215700 Sobic010G216400 Sobic010G216400 Sobic010G031000--Sobic010G216400 Sobic004G159400--Sobic001G197000 Sobic004G159400--Sobic001G508466 Sobic008G006300 Sobic008G006300 Sobic004G159400--Sobic008G006300 Sobic004G159400--Sobic001G047800 Sobic004G159400--Sobic003G273000 Sobic002G418400 Sobic002G418400 Sobic004G159400--Sobic002G418400 Sobic002G329900 Sobic002G329900 Sobic004G159400--Sobic002G329900 Sobic004G259432 Sobic004G259432 Sobic004G159400--Sobic004G259432 Sobic004G232500 Sobic004G232500 Sobic004G159400--Sobic004G232500 Sobic007G013900 Sobic007G013900 Sobic004G159000--Sobic007G013900 Sobic004G344800 Sobic004G344800 Sobic004G159000--Sobic004G344800 Sobic002G262200 Sobic002G262200 Sobic004G159000--Sobic002G262200 Sobic004G159000--Sobic004G030000 Sobic004G159000--Sobic003G196600 Sobic002G090700 Sobic002G090700 Sobic004G159000--Sobic002G090700 Sobic003G152900 Sobic003G152900 Sobic004G159000--Sobic003G152900 Sobic002G260200 Sobic002G260200 Sobic004G159000--Sobic002G260200 Sobic010G007400 Sobic010G007400 Sobic004G159000--Sobic010G007400 Sobic003G273000--Sobic001G513300 Sobic003G273000--Sobic004G232500 Sobic003G273000--Sobic009G069600 Sobic003G273000--Sobic010G031000 Sobic003G273000--Sobic004G159400 Sobic003G273000--Sobic006G118400 Sobic003G273000--Sobic001G508466 Sobic001G295100 Sobic001G295100 Sobic003G273000--Sobic001G295100 Sobic003G273000--Sobic010G216400
Octagon: transcription factors


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