Gene annotation
Transcriptome id Sobic.009G014700.1
Synonym Sb09g001430
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
cysteine-rich repeat secretory protein 55 precursor, putative, expressed
UniProt C5YYK3
Pfam PF01657
Panther DB PTHR32411 PTHR32411:SF44
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G48540 : receptor-like protein kinase-related family protein
RAP-DB (Rice) LOC_Os05g02200.1 : cysteine-rich repeat secretory protein 55 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a040926
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G118300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@GLTP domain containing protein, putative, expressed -
2 Sobic.009G077100 expressed protein -
3 Sobic.009G024500 50S ribosomal protein L10, chloroplast precursor, putative, expressed K02864: RP-L10, MRPL10, large subunit ribosomal protein L10
4 Sobic.010G031000 expressed protein -
5 Sobic.001G482800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
6 Sobic.001G365700 OsRhmbd13 - Putative Rhomboid homologue, expressed -
7 Sobic.010G077650 - -
8 Sobic.006G118400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@gibberellin 20 oxidase 2, putative, expressed -
9 Sobic.004G159400 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
10 Sobic.005G019100 TRAF-type zinc finger family protein, expressed -
11 Sobic.003G139200 - -
12 Sobic.003G273000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@hydrolase, putative, expressed K14664: IAA-amino acid hydrolase
13 Sobic.003G137600 CHIT10 - Chitinase family protein precursor, expressed -
14 Sobic.004G357800 phospholipase A2, putative, expressed -
15 Sobic.010G039000 expressed protein -
16 Sobic.004G173700 SLL1 protein, putative, expressed -
17 Sobic.002G246800 acetyltransferase, GNAT family, putative, expressed K00621: GNPNAT1, glucosamine-phosphate N-acetyltransferase
18 Sobic.001G031800 ribosomal protein L30 containing protein, expressed K02907: RP-L30, MRPL30, large subunit ribosomal protein L30
19 Sobic.004G232500 dnaJ homolog subfamily C member 7, putative, expressed K09527: DnaJ homolog subfamily C member 7
20 Sobic.009G069600 NADP-ME(PubMedID : 19549309)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADP-malic enzyme(PubMedID : 26904072)@NADP-dependent malic enzyme(PubMedID : 27016024)@NADP-dependent malic enzyme, chloroplast precursor, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)


Gene co-expression network
sample Sobic009G014700 Sobic009G014700 Sobic001G118300 Sobic001G118300 Sobic009G014700--Sobic001G118300 Sobic009G077100 Sobic009G077100 Sobic009G014700--Sobic009G077100 Sobic009G024500 Sobic009G024500 Sobic009G014700--Sobic009G024500 Sobic010G031000 Sobic010G031000 Sobic009G014700--Sobic010G031000 Sobic001G482800 Sobic001G482800 Sobic009G014700--Sobic001G482800 Sobic001G365700 Sobic001G365700 Sobic009G014700--Sobic001G365700 Sobic010G077650 Sobic010G077650 Sobic009G014700--Sobic010G077650 Sobic006G118400 Sobic006G118400 Sobic009G014700--Sobic006G118400 Sobic004G159400 Sobic004G159400 Sobic009G014700--Sobic004G159400 Sobic005G019100 Sobic005G019100 Sobic001G118300--Sobic005G019100 Sobic006G039600 Sobic006G039600 Sobic001G118300--Sobic006G039600 Sobic004G256700 Sobic004G256700 Sobic001G118300--Sobic004G256700 Sobic010G262300 Sobic010G262300 Sobic001G118300--Sobic010G262300 Sobic003G196600 Sobic003G196600 Sobic001G118300--Sobic003G196600 Sobic001G118300--Sobic010G031000 Sobic001G118300--Sobic004G159400 Sobic004G159000 Sobic004G159000 Sobic001G118300--Sobic004G159000 Sobic003G273000 Sobic003G273000 Sobic001G118300--Sobic003G273000 Sobic001G031800 Sobic001G031800 Sobic009G077100--Sobic001G031800 Sobic009G077100--Sobic009G024500 Sobic009G050000 Sobic009G050000 Sobic009G077100--Sobic009G050000 Sobic007G141100 Sobic007G141100 Sobic009G077100--Sobic007G141100 Sobic001G148700 Sobic001G148700 Sobic009G077100--Sobic001G148700 Sobic002G246800 Sobic002G246800 Sobic009G077100--Sobic002G246800 Sobic001G067601 Sobic001G067601 Sobic009G077100--Sobic001G067601 Sobic003G305100 Sobic003G305100 Sobic009G077100--Sobic003G305100 Sobic001G100400 Sobic001G100400 Sobic009G077100--Sobic001G100400 Sobic002G263100 Sobic002G263100 Sobic009G024500--Sobic002G263100 Sobic009G024500--Sobic001G031800 Sobic003G296800 Sobic003G296800 Sobic009G024500--Sobic003G296800 Sobic009G024500--Sobic003G305100 Sobic004G260200 Sobic004G260200 Sobic009G024500--Sobic004G260200 Sobic009G024500--Sobic009G077100 Sobic002G309700 Sobic002G309700 Sobic009G024500--Sobic002G309700 Sobic001G047800 Sobic001G047800 Sobic009G024500--Sobic001G047800 Sobic004G060500 Sobic004G060500 Sobic009G024500--Sobic004G060500 Sobic009G069600 Sobic009G069600 Sobic010G031000--Sobic009G069600 Sobic010G031000--Sobic003G273000 Sobic010G031000--Sobic004G260200 Sobic001G197000 Sobic001G197000 Sobic010G031000--Sobic001G197000 Sobic001G404800 Sobic001G404800 Sobic010G031000--Sobic001G404800 Sobic010G031000--Sobic001G047800 Sobic001G508466 Sobic001G508466 Sobic010G031000--Sobic001G508466 Sobic003G215700 Sobic003G215700 Sobic010G031000--Sobic003G215700 Sobic010G216400 Sobic010G216400 Sobic010G031000--Sobic010G216400 Sobic004G247700 Sobic004G247700 Sobic001G482800--Sobic004G247700 Sobic003G335300 Sobic003G335300 Sobic001G482800--Sobic003G335300 Sobic001G482800--Sobic001G365700 Sobic004G232500 Sobic004G232500 Sobic001G482800--Sobic004G232500 Sobic008G188400 Sobic008G188400 Sobic001G482800--Sobic008G188400 Sobic003G137600 Sobic003G137600 Sobic001G482800--Sobic003G137600 Sobic001G482800--Sobic006G118400 Sobic004G247500 Sobic004G247500 Sobic001G482800--Sobic004G247500 Sobic003G284100 Sobic003G284100 Sobic001G482800--Sobic003G284100 Sobic001G365700--Sobic003G335300 Sobic004G173700 Sobic004G173700 Sobic001G365700--Sobic004G173700 Sobic004G127000 Sobic004G127000 Sobic001G365700--Sobic004G127000 Sobic001G365700--Sobic003G137600 Sobic001G365700--Sobic001G482800 Sobic001G365700--Sobic010G216400 Sobic001G365700--Sobic003G284100 Sobic001G365700--Sobic004G232500 Sobic010G043250 Sobic010G043250 Sobic001G365700--Sobic010G043250 Sobic010G077650--Sobic004G159400 Sobic010G077650--Sobic003G273000 Sobic010G077650--Sobic001G508466 Sobic010G077650--Sobic001G197000 Sobic002G355100 Sobic002G355100 Sobic010G077650--Sobic002G355100 Sobic004G228700 Sobic004G228700 Sobic010G077650--Sobic004G228700 Sobic010G077650--Sobic010G031000 Sobic001G513300 Sobic001G513300 Sobic010G077650--Sobic001G513300 Sobic004G030501 Sobic004G030501 Sobic010G077650--Sobic004G030501 Sobic006G118400--Sobic003G273000 Sobic006G118400--Sobic004G232500 Sobic006G118400--Sobic003G335300 Sobic006G118400--Sobic001G482800 Sobic006G118400--Sobic004G159400 Sobic006G118400--Sobic001G365700 Sobic006G118400--Sobic010G216400 Sobic006G118400--Sobic010G031000 Sobic006G118400--Sobic010G262300 Sobic004G159400--Sobic001G197000 Sobic004G159400--Sobic001G508466 Sobic008G006300 Sobic008G006300 Sobic004G159400--Sobic008G006300 Sobic004G159400--Sobic001G047800 Sobic004G159400--Sobic003G273000 Sobic002G418400 Sobic002G418400 Sobic004G159400--Sobic002G418400 Sobic002G329900 Sobic002G329900 Sobic004G159400--Sobic002G329900 Sobic004G259432 Sobic004G259432 Sobic004G159400--Sobic004G259432 Sobic004G159400--Sobic004G232500
Octagon: transcription factors


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