Gene annotation
Transcriptome id Sobic.004G357800.4
Synonym Sb04g038430, PLA2-BETA
Functional annotation phospholipase A2, putative, expressed
UniProt A0A1Z5RQS6
Pfam -
Panther DB PTHR11716 PTHR11716:SF47
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016042; lipid catabolic process GO:0005509calcium ion binding GO:0004623phospholipase A2 activity


Orthologs (automatic annotation)
TAIR AT2G19690 : phospholipase A2-beta
RAP-DB (Rice) LOC_Os02g58500.1 : phospholipase A2, putative, expressed
MaizeGDB (Corn) Zm00025a032701
Brachypodium KQK02169
Barley -
Wheat TraesCS6D02G404600 , TraesCS2D02G471500 , TraesCS2A02G471600 , TraesCS2B02G494400
Populus -


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cDNA sequences
Sobic.004G357800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G218400 cytochrome c oxidase subunit 5B, mitochondrial precursor, putative, expressed K02265: cytochrome c oxidase subunit 5b
2 Sobic.001G031800 ribosomal protein L30 containing protein, expressed K02907: RP-L30, MRPL30, large subunit ribosomal protein L30
3 Sobic.007G013900 rickettsia 17 kDa surface antigen family protein, expressed -
4 Sobic.007G141100 expressed protein K18179: cytochrome c oxidase assembly factor 6
5 Sobic.010G007400 peptidase, T1 family, putative, expressed K02739: 20S proteasome subunit beta 2
6 Sobic.009G215300 fiber protein Fb11, putative, expressed -
7 Sobic.008G136800 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17777: mitochondrial import inner membrane translocase subunit TIM9
8 Sobic.001G060300 expressed protein -
9 Sobic.001G031900 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
10 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
11 Sobic.007G177200 peptidase, T1 family, putative, expressed K02731: 20S proteasome subunit alpha 4
12 Sobic.002G342000 protein phosphatase 2C, putative, expressed -
13 Sobic.001G047800 cytochrome b-c1 complex subunit 7, putative, expressed K00417: QCR7, ubiquinol-cytochrome c reductase subunit 7
14 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
15 Sobic.001G074700 cytochrome c oxidase-related, putative, expressed K02266: cytochrome c oxidase subunit 6a
16 Sobic.004G173700 SLL1 protein, putative, expressed -
17 Sobic.001G342200 40S ribosomal protein S15a, putative, expressed K02957: RP-S15Ae, small subunit ribosomal protein S15Ae
18 Sobic.010G031000 expressed protein -
19 Sobic.005G019100 TRAF-type zinc finger family protein, expressed -
20 Sobic.001G518500 adenylate kinase, putative, expressed K00939: adk, adenylate kinase


Gene co-expression network
sample Sobic004G357800 Sobic004G357800 Sobic003G218400 Sobic003G218400 Sobic004G357800--Sobic003G218400 Sobic001G031800 Sobic001G031800 Sobic004G357800--Sobic001G031800 Sobic007G013900 Sobic007G013900 Sobic004G357800--Sobic007G013900 Sobic007G141100 Sobic007G141100 Sobic004G357800--Sobic007G141100 Sobic010G007400 Sobic010G007400 Sobic004G357800--Sobic010G007400 Sobic009G215300 Sobic009G215300 Sobic004G357800--Sobic009G215300 Sobic008G136800 Sobic008G136800 Sobic004G357800--Sobic008G136800 Sobic001G060300 Sobic001G060300 Sobic004G357800--Sobic001G060300 Sobic001G031900 Sobic001G031900 Sobic004G357800--Sobic001G031900 Sobic001G047800 Sobic001G047800 Sobic003G218400--Sobic001G047800 Sobic004G260200 Sobic004G260200 Sobic003G218400--Sobic004G260200 Sobic002G309700 Sobic002G309700 Sobic003G218400--Sobic002G309700 Sobic002G418400 Sobic002G418400 Sobic003G218400--Sobic002G418400 Sobic003G215700 Sobic003G215700 Sobic003G218400--Sobic003G215700 Sobic001G404800 Sobic001G404800 Sobic003G218400--Sobic001G404800 Sobic003G218400--Sobic007G013900 Sobic004G170400 Sobic004G170400 Sobic003G218400--Sobic004G170400 Sobic001G074700 Sobic001G074700 Sobic003G218400--Sobic001G074700 Sobic001G134200 Sobic001G134200 Sobic001G031800--Sobic001G134200 Sobic002G263100 Sobic002G263100 Sobic001G031800--Sobic002G263100 Sobic003G296800 Sobic003G296800 Sobic001G031800--Sobic003G296800 Sobic001G031800--Sobic004G260200 Sobic001G031800--Sobic007G013900 Sobic001G031800--Sobic002G309700 Sobic002G246800 Sobic002G246800 Sobic001G031800--Sobic002G246800 Sobic001G031800--Sobic008G136800 Sobic007G184001 Sobic007G184001 Sobic001G031800--Sobic007G184001 Sobic007G013900--Sobic009G215300 Sobic004G159000 Sobic004G159000 Sobic007G013900--Sobic004G159000 Sobic002G260200 Sobic002G260200 Sobic007G013900--Sobic002G260200 Sobic006G013000 Sobic006G013000 Sobic007G013900--Sobic006G013000 Sobic007G013900--Sobic002G309700 Sobic007G013900--Sobic001G031800 Sobic007G013900--Sobic004G260200 Sobic002G395000 Sobic002G395000 Sobic007G013900--Sobic002G395000 Sobic007G013900--Sobic008G136800 Sobic007G141100--Sobic008G136800 Sobic007G141100--Sobic001G031800 Sobic007G141100--Sobic007G013900 Sobic003G074900 Sobic003G074900 Sobic007G141100--Sobic003G074900 Sobic009G001900 Sobic009G001900 Sobic007G141100--Sobic009G001900 Sobic007G141100--Sobic002G246800 Sobic004G164000 Sobic004G164000 Sobic007G141100--Sobic004G164000 Sobic007G141100--Sobic002G260200 Sobic007G141100--Sobic004G159000 Sobic004G030000 Sobic004G030000 Sobic010G007400--Sobic004G030000 Sobic002G090700 Sobic002G090700 Sobic010G007400--Sobic002G090700 Sobic003G116600 Sobic003G116600 Sobic010G007400--Sobic003G116600 Sobic002G401700 Sobic002G401700 Sobic010G007400--Sobic002G401700 Sobic010G007400--Sobic004G159000 Sobic010G007400--Sobic001G031900 Sobic010G007400--Sobic007G013900 Sobic003G152900 Sobic003G152900 Sobic010G007400--Sobic003G152900 Sobic010G007400--Sobic001G074700 Sobic009G215300--Sobic002G309700 Sobic001G181500 Sobic001G181500 Sobic009G215300--Sobic001G181500 Sobic009G215300--Sobic001G047800 Sobic009G215300--Sobic004G260200 Sobic009G211900 Sobic009G211900 Sobic009G215300--Sobic009G211900 Sobic009G215300--Sobic007G013900 Sobic001G282500 Sobic001G282500 Sobic009G215300--Sobic001G282500 Sobic003G135600 Sobic003G135600 Sobic009G215300--Sobic003G135600 Sobic009G215300--Sobic001G404800 Sobic006G203900 Sobic006G203900 Sobic008G136800--Sobic006G203900 Sobic008G136800--Sobic009G001900 Sobic008G136800--Sobic009G211900 Sobic008G136800--Sobic007G013900 Sobic008G136800--Sobic001G031800 Sobic006G124300 Sobic006G124300 Sobic008G136800--Sobic006G124300 Sobic008G136800--Sobic007G141100 Sobic002G296200 Sobic002G296200 Sobic008G136800--Sobic002G296200 Sobic008G136800--Sobic003G074900 Sobic001G342200 Sobic001G342200 Sobic001G060300--Sobic001G342200 Sobic001G178500 Sobic001G178500 Sobic001G060300--Sobic001G178500 Sobic001G214900 Sobic001G214900 Sobic001G060300--Sobic001G214900 Sobic004G262300 Sobic004G262300 Sobic001G060300--Sobic004G262300 Sobic009G112900 Sobic009G112900 Sobic001G060300--Sobic009G112900 Sobic002G402500 Sobic002G402500 Sobic001G060300--Sobic002G402500 Sobic001G060300--Sobic008G136800 Sobic010G194200 Sobic010G194200 Sobic001G060300--Sobic010G194200 Sobic009G012800 Sobic009G012800 Sobic001G060300--Sobic009G012800 Sobic006G058900 Sobic006G058900 Sobic001G031900--Sobic006G058900 Sobic004G202100 Sobic004G202100 Sobic001G031900--Sobic004G202100 Sobic001G031900--Sobic002G395000 Sobic001G350600 Sobic001G350600 Sobic001G031900--Sobic001G350600 Sobic004G344800 Sobic004G344800 Sobic001G031900--Sobic004G344800 Sobic001G031900--Sobic003G152900 Sobic001G031900--Sobic004G170400 Sobic001G458800 Sobic001G458800 Sobic001G031900--Sobic001G458800 Sobic001G031900--Sobic004G030000
Octagon: transcription factors


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