Gene annotation
Transcriptome id Sobic.002G159300.2
Synonym FC1, Sb02g020320, ATFC-I, FC-I
Functional annotation ferrochelatase-2, chloroplast precursor, putative, expressed
UniProt A0A1W0W4D6
Pfam PF00762
Panther DB PTHR11108 PTHR11108:SF4
NCBI CDD -
KEGG Orthology K01772; hemH, protoporphyrin/coproporphyrin ferrochelatase
Gene Ontology GO:0006783; heme biosynthetic process GO:0004325ferrochelatase activity


Orthologs (automatic annotation)
TAIR AT5G26030 : ferrochelatase 1
RAP-DB (Rice) LOC_Os09g12560.2 : ferrochelatase-2, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a018655 , Zm00025a013678
Brachypodium KQJ89751 , KQJ89752 , KQK02111
Barley HORVU5Hr1G054060.4 , HORVU5Hr1G054060.5 , HORVU5Hr1G054060.6 , HORVU5Hr1G054060.7 , HORVU5Hr1G054060.1 , HORVU5Hr1G054060.2 , HORVU5Hr1G054060.3
Wheat TraesCS5A02G177800 , TraesCS5B02G175100 , TraesCS5D02G182100
Populus -


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cDNA sequences
Sobic.002G159300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G195100 peptidase, T1 family, putative, expressed K02732: 20S proteasome subunit beta 6
2 Sobic.001G459500 leucine rich repeat containing protein, expressed -
3 Sobic.003G323600 translation initiation factor SUI1, putative, expressed K03113: EIF1, translation initiation factor 1
4 Sobic.003G367451 - K08516: synaptobrevin homolog YKT6
5 Sobic.001G122500 SNARE associated Golgi protein, putative, expressed -
6 Sobic.001G224400 eukaryotic translation initiation factor, putative, expressed K03259: translation initiation factor 4E
7 Sobic.009G225000 transmembrane protein 93, putative, expressed -
8 Sobic.010G064600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@LIM domain-containing protein, putative, expressed -
9 Sobic.002G153500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
10 Sobic.007G019100 mitochondrial ribosomal protein S10, putative, expressed K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
11 Sobic.007G045600 MSP domain containing protein, expressed -
12 Sobic.002G296300 expressed protein -
13 Sobic.004G339300 ABC transporter, ATP-binding protein, putative, expressed K12608: CCR4-NOT complex subunit CAF16
14 Sobic.002G083266 - K00326: cytochrome-b5 reductase
15 Sobic.002G264400 metallo-beta-lactamase family protein, putative, expressed K01069: gloB, gloC, hydroxyacylglutathione hydrolase
16 Sobic.001G118300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@GLTP domain containing protein, putative, expressed -
17 Sobic.007G114200 alpha-soluble NSF attachment protein, putative, expressed K15296: NAPA, SNAPA, alpha-soluble NSF attachment protein
18 Sobic.003G185500 expressed protein -
19 Sobic.003G398300 mitochondrial import inner membrane translocase subunit Tim16, putative, expressed K17805: PAM16, mitochondrial import inner membrane translocase subunit TIM16
20 Sobic.006G264300 GA18008-PA, putative, expressed -


Gene co-expression network
sample Sobic002G159300 Sobic002G159300 Sobic007G195100 Sobic007G195100 Sobic002G159300--Sobic007G195100 Sobic001G459500 Sobic001G459500 Sobic002G159300--Sobic001G459500 Sobic003G323600 Sobic003G323600 Sobic002G159300--Sobic003G323600 Sobic003G367451 Sobic003G367451 Sobic002G159300--Sobic003G367451 Sobic001G122500 Sobic001G122500 Sobic002G159300--Sobic001G122500 Sobic001G224400 Sobic001G224400 Sobic002G159300--Sobic001G224400 Sobic009G225000 Sobic009G225000 Sobic002G159300--Sobic009G225000 Sobic010G064600 Sobic010G064600 Sobic002G159300--Sobic010G064600 Sobic002G153500 Sobic002G153500 Sobic002G159300--Sobic002G153500 Sobic003G333400 Sobic003G333400 Sobic007G195100--Sobic003G333400 Sobic007G195100--Sobic003G367451 Sobic002G296300 Sobic002G296300 Sobic007G195100--Sobic002G296300 Sobic004G050000 Sobic004G050000 Sobic007G195100--Sobic004G050000 Sobic001G403700 Sobic001G403700 Sobic007G195100--Sobic001G403700 Sobic009G111600 Sobic009G111600 Sobic007G195100--Sobic009G111600 Sobic007G195100--Sobic002G159300 Sobic007G195100--Sobic003G323600 Sobic001G132100 Sobic001G132100 Sobic007G195100--Sobic001G132100 Sobic001G459500--Sobic003G323600 Sobic007G045600 Sobic007G045600 Sobic001G459500--Sobic007G045600 Sobic010G188200 Sobic010G188200 Sobic001G459500--Sobic010G188200 Sobic007G142500 Sobic007G142500 Sobic001G459500--Sobic007G142500 Sobic003G398300 Sobic003G398300 Sobic001G459500--Sobic003G398300 Sobic006G232200 Sobic006G232200 Sobic001G459500--Sobic006G232200 Sobic001G459500--Sobic003G367451 Sobic001G461900 Sobic001G461900 Sobic001G459500--Sobic001G461900 Sobic004G335000 Sobic004G335000 Sobic001G459500--Sobic004G335000 Sobic003G323600--Sobic007G045600 Sobic007G019100 Sobic007G019100 Sobic003G323600--Sobic007G019100 Sobic003G323600--Sobic006G232200 Sobic003G323600--Sobic001G459500 Sobic003G323600--Sobic003G367451 Sobic003G323600--Sobic007G142500 Sobic003G323600--Sobic001G132100 Sobic001G236300 Sobic001G236300 Sobic003G323600--Sobic001G236300 Sobic001G048832 Sobic001G048832 Sobic003G323600--Sobic001G048832 Sobic004G327300 Sobic004G327300 Sobic003G367451--Sobic004G327300 Sobic003G367451--Sobic001G236300 Sobic007G114200 Sobic007G114200 Sobic003G367451--Sobic007G114200 Sobic001G433400 Sobic001G433400 Sobic003G367451--Sobic001G433400 Sobic004G272800 Sobic004G272800 Sobic003G367451--Sobic004G272800 Sobic002G083266 Sobic002G083266 Sobic003G367451--Sobic002G083266 Sobic004G130900 Sobic004G130900 Sobic003G367451--Sobic004G130900 Sobic003G253000 Sobic003G253000 Sobic003G367451--Sobic003G253000 Sobic003G220600 Sobic003G220600 Sobic003G367451--Sobic003G220600 Sobic006G217300 Sobic006G217300 Sobic001G122500--Sobic006G217300 Sobic001G214200 Sobic001G214200 Sobic001G122500--Sobic001G214200 Sobic004G350300 Sobic004G350300 Sobic001G122500--Sobic004G350300 Sobic006G263100 Sobic006G263100 Sobic001G122500--Sobic006G263100 Sobic010G188100 Sobic010G188100 Sobic001G122500--Sobic010G188100 Sobic003G002400 Sobic003G002400 Sobic001G122500--Sobic003G002400 Sobic010G026700 Sobic010G026700 Sobic001G122500--Sobic010G026700 Sobic001G409900 Sobic001G409900 Sobic001G122500--Sobic001G409900 Sobic002G214900 Sobic002G214900 Sobic001G122500--Sobic002G214900 Sobic003G368500 Sobic003G368500 Sobic001G224400--Sobic003G368500 Sobic003G155400 Sobic003G155400 Sobic001G224400--Sobic003G155400 Sobic001G224400--Sobic002G153500 Sobic010G154700 Sobic010G154700 Sobic001G224400--Sobic010G154700 Sobic010G213400 Sobic010G213400 Sobic001G224400--Sobic010G213400 Sobic008G189300 Sobic008G189300 Sobic001G224400--Sobic008G189300 Sobic010G153100 Sobic010G153100 Sobic001G224400--Sobic010G153100 Sobic001G224400--Sobic001G132100 Sobic002G222900 Sobic002G222900 Sobic001G224400--Sobic002G222900 Sobic006G281800 Sobic006G281800 Sobic009G225000--Sobic006G281800 Sobic001G283200 Sobic001G283200 Sobic009G225000--Sobic001G283200 Sobic004G194900 Sobic004G194900 Sobic009G225000--Sobic004G194900 Sobic004G181900 Sobic004G181900 Sobic009G225000--Sobic004G181900 Sobic009G225000--Sobic001G461900 Sobic009G225000--Sobic007G142500 Sobic001G460600 Sobic001G460600 Sobic009G225000--Sobic001G460600 Sobic004G206700 Sobic004G206700 Sobic009G225000--Sobic004G206700 Sobic003G349300 Sobic003G349300 Sobic009G225000--Sobic003G349300 Sobic003G087000 Sobic003G087000 Sobic010G064600--Sobic003G087000 Sobic008G093000 Sobic008G093000 Sobic010G064600--Sobic008G093000 Sobic010G261600 Sobic010G261600 Sobic010G064600--Sobic010G261600 Sobic004G228800 Sobic004G228800 Sobic010G064600--Sobic004G228800 Sobic010G184300 Sobic010G184300 Sobic010G064600--Sobic010G184300 Sobic010G064600--Sobic006G281800 Sobic009G072700 Sobic009G072700 Sobic010G064600--Sobic009G072700 Sobic001G089800 Sobic001G089800 Sobic010G064600--Sobic001G089800 Sobic001G003000 Sobic001G003000 Sobic010G064600--Sobic001G003000 Sobic002G153500--Sobic001G224400 Sobic002G153500--Sobic008G189300 Sobic004G284500 Sobic004G284500 Sobic002G153500--Sobic004G284500 Sobic002G153500--Sobic004G272800 Sobic004G225500 Sobic004G225500 Sobic002G153500--Sobic004G225500 Sobic002G153500--Sobic001G132100 Sobic008G032100 Sobic008G032100 Sobic002G153500--Sobic008G032100 Sobic007G115100 Sobic007G115100 Sobic002G153500--Sobic007G115100 Sobic004G204900 Sobic004G204900 Sobic002G153500--Sobic004G204900
Octagon: transcription factors


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