Gene annotation
Transcriptome id Sobic.004G030501.1
Synonym -
Functional annotation -
UniProt A0A1Z5RLH6
Pfam -
Panther DB PTHR33784 PTHR33784:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G74875 : -
RAP-DB (Rice) LOC_Os05g40360.1 : expressed protein
MaizeGDB (Corn) Zm00025a018863
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G533400 major facilitator superfamily domain-containing protein 5, putative, expressed -
2 Sobic.010G001900 Long chain acyl-CoA oxidase(PubMedID : 18985313)@acyl-coenzyme A oxidase 1.2, peroxisomal, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
3 Sobic.010G262300 coiled-coil domain-containing protein 90A, mitochondrial precursor, putative, expressed -
4 Sobic.001G508466 - -
5 Sobic.001G077000 similar to Cold acclimation protein COR413-PM1(PubMedID : 29862293)@cold acclimation protein WCOR413, putative, expressed -
6 Sobic.001G197000 dehydration response related protein, putative, expressed -
7 Sobic.004G273100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@jmjC domain containing protein, expressed -
8 Sobic.003G273000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@hydrolase, putative, expressed K14664: IAA-amino acid hydrolase
9 Sobic.001G513300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein-methionine-S-oxide reductase, putative, expressed -
10 Sobic.001G404800 CHCH domain containing protein, expressed K03952: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8
11 Sobic.004G286100 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
12 Sobic.002G348100 40S ribosomal protein S13, putative, expressed K02953: RP-S13e, small subunit ribosomal protein S13e
13 Sobic.009G063900 expressed protein -
14 Sobic.003G209000 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
15 Sobic.003G072300 triosephosphate isomerase(PubMedID : 27016024)@triosephosphate isomerase, cytosolic, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)
16 Sobic.010G028200 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase
17 Sobic.010G031000 expressed protein -
18 Sobic.004G123000 expressed protein -
19 Sobic.004G146000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
20 Sobic.001G018500 expressed protein K17784: MINOS1, mitochondrial inner membrane organizing system protein 1


Gene co-expression network
sample Sobic004G030501 Sobic004G030501 Sobic001G533400 Sobic001G533400 Sobic004G030501--Sobic001G533400 Sobic010G001900 Sobic010G001900 Sobic004G030501--Sobic010G001900 Sobic010G262300 Sobic010G262300 Sobic004G030501--Sobic010G262300 Sobic001G508466 Sobic001G508466 Sobic004G030501--Sobic001G508466 Sobic001G077000 Sobic001G077000 Sobic004G030501--Sobic001G077000 Sobic001G197000 Sobic001G197000 Sobic004G030501--Sobic001G197000 Sobic004G273100 Sobic004G273100 Sobic004G030501--Sobic004G273100 Sobic003G273000 Sobic003G273000 Sobic004G030501--Sobic003G273000 Sobic001G513300 Sobic001G513300 Sobic004G030501--Sobic001G513300 Sobic001G339700 Sobic001G339700 Sobic001G533400--Sobic001G339700 Sobic001G533400--Sobic010G001900 Sobic001G119100 Sobic001G119100 Sobic001G533400--Sobic001G119100 Sobic002G201600 Sobic002G201600 Sobic001G533400--Sobic002G201600 Sobic008G025600 Sobic008G025600 Sobic001G533400--Sobic008G025600 Sobic004G205100 Sobic004G205100 Sobic001G533400--Sobic004G205100 Sobic005G091500 Sobic005G091500 Sobic001G533400--Sobic005G091500 Sobic001G119000 Sobic001G119000 Sobic001G533400--Sobic001G119000 Sobic001G252300 Sobic001G252300 Sobic001G533400--Sobic001G252300 Sobic010G001900--Sobic001G533400 Sobic010G001900--Sobic002G201600 Sobic005G051200 Sobic005G051200 Sobic010G001900--Sobic005G051200 Sobic010G001900--Sobic001G339700 Sobic002G414600 Sobic002G414600 Sobic010G001900--Sobic002G414600 Sobic010G001900--Sobic008G025600 Sobic001G317200 Sobic001G317200 Sobic010G001900--Sobic001G317200 Sobic003G317100 Sobic003G317100 Sobic010G001900--Sobic003G317100 Sobic006G137800 Sobic006G137800 Sobic010G001900--Sobic006G137800 Sobic006G239300 Sobic006G239300 Sobic010G262300--Sobic006G239300 Sobic001G308700 Sobic001G308700 Sobic010G262300--Sobic001G308700 Sobic002G362000 Sobic002G362000 Sobic010G262300--Sobic002G362000 Sobic010G262300--Sobic004G030501 Sobic001G148700 Sobic001G148700 Sobic010G262300--Sobic001G148700 Sobic004G123000 Sobic004G123000 Sobic010G262300--Sobic004G123000 Sobic006G118400 Sobic006G118400 Sobic010G262300--Sobic006G118400 Sobic001G067601 Sobic001G067601 Sobic010G262300--Sobic001G067601 Sobic010G262300--Sobic001G513300 Sobic004G146000 Sobic004G146000 Sobic001G508466--Sobic004G146000 Sobic004G159400 Sobic004G159400 Sobic001G508466--Sobic004G159400 Sobic001G508466--Sobic004G205100 Sobic002G418400 Sobic002G418400 Sobic001G508466--Sobic002G418400 Sobic005G099000 Sobic005G099000 Sobic001G508466--Sobic005G099000 Sobic001G108200 Sobic001G108200 Sobic001G508466--Sobic001G108200 Sobic002G355100 Sobic002G355100 Sobic001G508466--Sobic002G355100 Sobic009G234100 Sobic009G234100 Sobic001G508466--Sobic009G234100 Sobic004G208700 Sobic004G208700 Sobic001G508466--Sobic004G208700 Sobic003G072300 Sobic003G072300 Sobic001G077000--Sobic003G072300 Sobic001G077000--Sobic002G418400 Sobic003G155400 Sobic003G155400 Sobic001G077000--Sobic003G155400 Sobic003G209000 Sobic003G209000 Sobic001G077000--Sobic003G209000 Sobic002G296200 Sobic002G296200 Sobic001G077000--Sobic002G296200 Sobic006G083500 Sobic006G083500 Sobic001G077000--Sobic006G083500 Sobic003G215700 Sobic003G215700 Sobic001G077000--Sobic003G215700 Sobic004G060500 Sobic004G060500 Sobic001G077000--Sobic004G060500 Sobic003G296800 Sobic003G296800 Sobic001G077000--Sobic003G296800 Sobic001G197000--Sobic004G159400 Sobic001G197000--Sobic001G077000 Sobic002G329900 Sobic002G329900 Sobic001G197000--Sobic002G329900 Sobic001G197000--Sobic003G215700 Sobic001G047800 Sobic001G047800 Sobic001G197000--Sobic001G047800 Sobic001G197000--Sobic001G533400 Sobic001G197000--Sobic003G209000 Sobic001G197000--Sobic002G418400 Sobic010G031000 Sobic010G031000 Sobic001G197000--Sobic010G031000 Sobic006G039600 Sobic006G039600 Sobic004G273100--Sobic006G039600 Sobic009G120000 Sobic009G120000 Sobic004G273100--Sobic009G120000 Sobic002G090200 Sobic002G090200 Sobic004G273100--Sobic002G090200 Sobic004G273100--Sobic001G533400 Sobic004G273100--Sobic004G030501 Sobic004G273100--Sobic010G001900 Sobic008G112600 Sobic008G112600 Sobic004G273100--Sobic008G112600 Sobic002G267500 Sobic002G267500 Sobic004G273100--Sobic002G267500 Sobic003G227300 Sobic003G227300 Sobic004G273100--Sobic003G227300 Sobic003G273000--Sobic001G513300 Sobic004G232500 Sobic004G232500 Sobic003G273000--Sobic004G232500 Sobic009G069600 Sobic009G069600 Sobic003G273000--Sobic009G069600 Sobic003G273000--Sobic010G031000 Sobic003G273000--Sobic004G159400 Sobic003G273000--Sobic006G118400 Sobic003G273000--Sobic001G508466 Sobic001G295100 Sobic001G295100 Sobic003G273000--Sobic001G295100 Sobic010G216400 Sobic010G216400 Sobic003G273000--Sobic010G216400 Sobic001G513300--Sobic003G273000 Sobic004G228700 Sobic004G228700 Sobic001G513300--Sobic004G228700 Sobic007G016100 Sobic007G016100 Sobic001G513300--Sobic007G016100 Sobic001G513300--Sobic001G308700 Sobic001G513300--Sobic010G031000 Sobic002G136700 Sobic002G136700 Sobic001G513300--Sobic002G136700 Sobic001G513300--Sobic001G508466 Sobic001G513300--Sobic001G295100 Sobic001G513300--Sobic002G362000
Octagon: transcription factors


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