Gene annotation
Transcriptome id Sobic.002G222400.1
Synonym Sb02g026320
Functional annotation expressed protein
UniProt C5X279
Pfam PF07800
Panther DB PTHR31197 PTHR31197:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G08460 : Protein of unknown function (DUF1644)
RAP-DB (Rice) LOC_Os09g27860.1 : expressed protein
MaizeGDB (Corn) Zm00025a014040
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G141100 expressed protein K18179: cytochrome c oxidase assembly factor 6
2 Sobic.001G135200 OB-fold nucleic acid binding domain containing protein, putative, expressed K15365: RecQ-mediated genome instability protein 2
3 Sobic.002G222200 OsPDIL2-3 protein disulfide isomerase PDIL2-3, expressed K09584: PDIA6, protein disulfide-isomerase A6
4 Sobic.003G261100 WD repeat-containing protein, putative, expressed K14753: guanine nucleotide-binding protein subunit beta-2-like 1 protein
5 Sobic.003G016300 SFT2, putative, expressed -
6 Sobic.007G013900 rickettsia 17 kDa surface antigen family protein, expressed -
7 Sobic.003G237400 plastidic ATP/ADP-transporter, putative, expressed K03301: ATP:ADP antiporter, AAA family
8 Sobic.006G153200 OsClp7 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
9 Sobic.010G216400 expressed protein -
10 Sobic.004G173700 SLL1 protein, putative, expressed -
11 Sobic.003G044700 zinc finger family protein, putative, expressed -
12 Sobic.004G100100 expressed protein -
13 Sobic.001G031800 ribosomal protein L30 containing protein, expressed K02907: RP-L30, MRPL30, large subunit ribosomal protein L30
14 Sobic.005G185200 - -
15 Sobic.002G420600 nucleoside-triphosphatase, putative, expressed -
16 Sobic.001G219800 methyltransferase, putative, expressed -
17 Sobic.008G136800 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17777: mitochondrial import inner membrane translocase subunit TIM9
18 Sobic.002G260200 - -
19 Sobic.001G365700 OsRhmbd13 - Putative Rhomboid homologue, expressed -
20 Sobic.003G335300 E2F-related protein, putative, expressed -


Gene co-expression network
sample Sobic002G222400 Sobic002G222400 Sobic007G141100 Sobic007G141100 Sobic002G222400--Sobic007G141100 Sobic001G135200 Sobic001G135200 Sobic002G222400--Sobic001G135200 Sobic002G222200 Sobic002G222200 Sobic002G222400--Sobic002G222200 Sobic003G261100 Sobic003G261100 Sobic002G222400--Sobic003G261100 Sobic003G016300 Sobic003G016300 Sobic002G222400--Sobic003G016300 Sobic007G013900 Sobic007G013900 Sobic002G222400--Sobic007G013900 Sobic003G237400 Sobic003G237400 Sobic002G222400--Sobic003G237400 Sobic006G153200 Sobic006G153200 Sobic002G222400--Sobic006G153200 Sobic010G216400 Sobic010G216400 Sobic002G222400--Sobic010G216400 Sobic008G136800 Sobic008G136800 Sobic007G141100--Sobic008G136800 Sobic001G031800 Sobic001G031800 Sobic007G141100--Sobic001G031800 Sobic007G141100--Sobic007G013900 Sobic003G074900 Sobic003G074900 Sobic007G141100--Sobic003G074900 Sobic009G001900 Sobic009G001900 Sobic007G141100--Sobic009G001900 Sobic002G246800 Sobic002G246800 Sobic007G141100--Sobic002G246800 Sobic004G164000 Sobic004G164000 Sobic007G141100--Sobic004G164000 Sobic002G260200 Sobic002G260200 Sobic007G141100--Sobic002G260200 Sobic004G159000 Sobic004G159000 Sobic007G141100--Sobic004G159000 Sobic003G044700 Sobic003G044700 Sobic001G135200--Sobic003G044700 Sobic001G192700 Sobic001G192700 Sobic001G135200--Sobic001G192700 Sobic001G135200--Sobic003G016300 Sobic004G261800 Sobic004G261800 Sobic001G135200--Sobic004G261800 Sobic002G352200 Sobic002G352200 Sobic001G135200--Sobic002G352200 Sobic004G100100 Sobic004G100100 Sobic001G135200--Sobic004G100100 Sobic009G244900 Sobic009G244900 Sobic001G135200--Sobic009G244900 Sobic005G185200 Sobic005G185200 Sobic001G135200--Sobic005G185200 Sobic006G271000 Sobic006G271000 Sobic001G135200--Sobic006G271000 Sobic001G073600 Sobic001G073600 Sobic002G222200--Sobic001G073600 Sobic010G002800 Sobic010G002800 Sobic002G222200--Sobic010G002800 Sobic008G018200 Sobic008G018200 Sobic002G222200--Sobic008G018200 Sobic004G011700 Sobic004G011700 Sobic002G222200--Sobic004G011700 Sobic002G232400 Sobic002G232400 Sobic002G222200--Sobic002G232400 Sobic002G222200--Sobic001G135200 Sobic009G224400 Sobic009G224400 Sobic002G222200--Sobic009G224400 Sobic001G352800 Sobic001G352800 Sobic002G222200--Sobic001G352800 Sobic007G119600 Sobic007G119600 Sobic002G222200--Sobic007G119600 Sobic001G370700 Sobic001G370700 Sobic003G261100--Sobic001G370700 Sobic002G131600 Sobic002G131600 Sobic003G261100--Sobic002G131600 Sobic001G057300 Sobic001G057300 Sobic003G261100--Sobic001G057300 Sobic006G035900 Sobic006G035900 Sobic003G261100--Sobic006G035900 Sobic009G115700 Sobic009G115700 Sobic003G261100--Sobic009G115700 Sobic007G191600 Sobic007G191600 Sobic003G261100--Sobic007G191600 Sobic004G155100 Sobic004G155100 Sobic003G261100--Sobic004G155100 Sobic001G214900 Sobic001G214900 Sobic003G261100--Sobic001G214900 Sobic001G501600 Sobic001G501600 Sobic003G261100--Sobic001G501600 Sobic003G016300--Sobic002G352200 Sobic002G217500 Sobic002G217500 Sobic003G016300--Sobic002G217500 Sobic003G016300--Sobic001G192700 Sobic001G219800 Sobic001G219800 Sobic003G016300--Sobic001G219800 Sobic008G018300 Sobic008G018300 Sobic003G016300--Sobic008G018300 Sobic006G203900 Sobic006G203900 Sobic003G016300--Sobic006G203900 Sobic002G255400 Sobic002G255400 Sobic003G016300--Sobic002G255400 Sobic009G211900 Sobic009G211900 Sobic003G016300--Sobic009G211900 Sobic002G420600 Sobic002G420600 Sobic003G016300--Sobic002G420600 Sobic009G215300 Sobic009G215300 Sobic007G013900--Sobic009G215300 Sobic007G013900--Sobic004G159000 Sobic007G013900--Sobic002G260200 Sobic006G013000 Sobic006G013000 Sobic007G013900--Sobic006G013000 Sobic002G309700 Sobic002G309700 Sobic007G013900--Sobic002G309700 Sobic007G013900--Sobic001G031800 Sobic004G260200 Sobic004G260200 Sobic007G013900--Sobic004G260200 Sobic002G395000 Sobic002G395000 Sobic007G013900--Sobic002G395000 Sobic007G013900--Sobic008G136800 Sobic001G031900 Sobic001G031900 Sobic003G237400--Sobic001G031900 Sobic003G237400--Sobic004G159000 Sobic003G237400--Sobic007G191600 Sobic001G342200 Sobic001G342200 Sobic003G237400--Sobic001G342200 Sobic003G237400--Sobic009G224400 Sobic009G112900 Sobic009G112900 Sobic003G237400--Sobic009G112900 Sobic003G237400--Sobic003G261100 Sobic004G344800 Sobic004G344800 Sobic003G237400--Sobic004G344800 Sobic003G237400--Sobic007G013900 Sobic009G218000 Sobic009G218000 Sobic006G153200--Sobic009G218000 Sobic006G153200--Sobic002G217500 Sobic006G153200--Sobic004G100100 Sobic003G075200 Sobic003G075200 Sobic006G153200--Sobic003G075200 Sobic003G167000 Sobic003G167000 Sobic006G153200--Sobic003G167000 Sobic009G107200 Sobic009G107200 Sobic006G153200--Sobic009G107200 Sobic003G113400 Sobic003G113400 Sobic006G153200--Sobic003G113400 Sobic003G260600 Sobic003G260600 Sobic006G153200--Sobic003G260600 Sobic008G011800 Sobic008G011800 Sobic006G153200--Sobic008G011800 Sobic001G365700 Sobic001G365700 Sobic010G216400--Sobic001G365700 Sobic009G069600 Sobic009G069600 Sobic010G216400--Sobic009G069600 Sobic004G232500 Sobic004G232500 Sobic010G216400--Sobic004G232500 Sobic010G031000 Sobic010G031000 Sobic010G216400--Sobic010G031000 Sobic003G273000 Sobic003G273000 Sobic010G216400--Sobic003G273000 Sobic009G176400 Sobic009G176400 Sobic010G216400--Sobic009G176400 Sobic003G335300 Sobic003G335300 Sobic010G216400--Sobic003G335300 Sobic004G173700 Sobic004G173700 Sobic010G216400--Sobic004G173700 Sobic001G482800 Sobic001G482800 Sobic010G216400--Sobic001G482800
Octagon: transcription factors


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