Gene annotation
Transcriptome id Sobic.001G420900.1
Synonym XBAT31, Sb01g039610
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
ankyrin repeat family protein, putative, expressed
UniProt C5WPG7
Pfam PF12796
Panther DB PTHR24128 PTHR24128:SF19
NCBI CDD KOG4412; 26S proteasome regulatory complex, subunit PSMD10
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G28840 : XB3 ortholog 1 in Arabidopsis thaliana
RAP-DB (Rice) LOC_Os03g16780.1 : ankyrin repeat family protein, putative, expressed
MaizeGDB (Corn) Zm00025a001840 , Zm00025a038258 , Zm00025a052756
Brachypodium KQK22340
Barley HORVU4Hr1G059710.8 , HORVU4Hr1G059710.9 , HORVU4Hr1G059710.1 , HORVU4Hr1G059710.2 , HORVU4Hr1G059710.3 , HORVU4Hr1G059710.4 , HORVU4Hr1G059710.5 , HORVU4Hr1G059710.6 , HORVU4Hr1G059710.7 , HORVU3Hr1G116350.1 , HORVU3Hr1G116350.3 , HORVU3Hr1G116350.2 , HORVU3Hr1G116350.5 , HORVU3Hr1G116350.4 , HORVU3Hr1G116350.6 , HORVU4Hr1G059710.12 , HORVU4Hr1G059710.13 , HORVU4Hr1G059710.10 , HORVU4Hr1G059710.11
Wheat TraesCS4B02G207400 , TraesCS4A02G097000 , TraesCS4A02G097000 , TraesCS3B02G609500 , TraesCS3D02G537900 , TraesCS3A02G532700 , TraesCS4D02G208300
Populus -


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cDNA sequences
Sobic.001G420900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G214900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@4-Coumarate-CoA ligase(PubMedID : 22313236)@AMP-binding domain containing protein, expressed K01904: 4-coumarate--CoA ligase
2 Sobic.003G182400 DNA-damage-repair/toleration protein DRT102, putative, expressed -
3 Sobic.002G328100 TKL_IRAK_DUF26-lc.18 - DUF26 kinases have homology to DUF26 containing loci, expressed -
4 Sobic.001G463800 expressed protein -
5 Sobic.001G513600 C-methyltransferase, putative, expressed K08242: 24-methylenesterol C-methyltransferase
6 Sobic.003G374200 dnaJ domain containing protein, expressed K09519: DnaJ homolog subfamily B member 13
7 Sobic.008G008300 expressed protein -
8 Sobic.001G198200 CRP3 - Cysteine-rich family protein precursor, expressed -
9 Sobic.005G116900 expressed protein -
10 Sobic.009G214800 - -
11 Sobic.004G006700 tetratricopeptide repeat domain containing protein, expressed -
12 Sobic.002G287750 - -
13 Sobic.001G463400 expressed protein -
14 Sobic.004G007600 glycosyltransferase protein, putative, expressed -
15 Sobic.007G136700 YGL010w, putative, expressed -
16 Sobic.001G110300 fb27, putative, expressed -
17 Sobic.009G256700 - -
18 Sobic.006G067100 ribosome inactivating protein, putative, expressed -
19 Sobic.004G326900 UDP-glucuronate 4-epimerase, putative, expressed K08679: UDP-glucuronate 4-epimerase
20 Sobic.008G084401 - -


Gene co-expression network
sample Sobic001G420900 Sobic001G420900 Sobic010G214900 Sobic010G214900 Sobic001G420900--Sobic010G214900 Sobic003G182400 Sobic003G182400 Sobic001G420900--Sobic003G182400 Sobic002G328100 Sobic002G328100 Sobic001G420900--Sobic002G328100 Sobic001G463800 Sobic001G463800 Sobic001G420900--Sobic001G463800 Sobic001G513600 Sobic001G513600 Sobic001G420900--Sobic001G513600 Sobic003G374200 Sobic003G374200 Sobic001G420900--Sobic003G374200 Sobic008G008300 Sobic008G008300 Sobic001G420900--Sobic008G008300 Sobic001G198200 Sobic001G198200 Sobic001G420900--Sobic001G198200 Sobic005G116900 Sobic005G116900 Sobic001G420900--Sobic005G116900 Sobic010G214900--Sobic001G198200 Sobic007G157900 Sobic007G157900 Sobic010G214900--Sobic007G157900 Sobic006G156000 Sobic006G156000 Sobic010G214900--Sobic006G156000 Sobic001G432000 Sobic001G432000 Sobic010G214900--Sobic001G432000 Sobic008G127500 Sobic008G127500 Sobic010G214900--Sobic008G127500 Sobic004G293100 Sobic004G293100 Sobic010G214900--Sobic004G293100 Sobic006G008400 Sobic006G008400 Sobic010G214900--Sobic006G008400 Sobic005G168100 Sobic005G168100 Sobic010G214900--Sobic005G168100 Sobic009G062000 Sobic009G062000 Sobic010G214900--Sobic009G062000 Sobic008G103900 Sobic008G103900 Sobic003G182400--Sobic008G103900 Sobic007G188600 Sobic007G188600 Sobic003G182400--Sobic007G188600 Sobic001G202400 Sobic001G202400 Sobic003G182400--Sobic001G202400 Sobic006G038200 Sobic006G038200 Sobic003G182400--Sobic006G038200 Sobic010G212200 Sobic010G212200 Sobic003G182400--Sobic010G212200 Sobic002G357400 Sobic002G357400 Sobic003G182400--Sobic002G357400 Sobic006G281500 Sobic006G281500 Sobic003G182400--Sobic006G281500 Sobic007G143000 Sobic007G143000 Sobic003G182400--Sobic007G143000 Sobic004G140300 Sobic004G140300 Sobic003G182400--Sobic004G140300 Sobic003G049500 Sobic003G049500 Sobic002G328100--Sobic003G049500 Sobic003G368800 Sobic003G368800 Sobic002G328100--Sobic003G368800 Sobic004G147200 Sobic004G147200 Sobic002G328100--Sobic004G147200 Sobic009G112400 Sobic009G112400 Sobic002G328100--Sobic009G112400 Sobic003G245900 Sobic003G245900 Sobic002G328100--Sobic003G245900 Sobic002G133100 Sobic002G133100 Sobic002G328100--Sobic002G133100 Sobic003G052600 Sobic003G052600 Sobic002G328100--Sobic003G052600 Sobic002G259400 Sobic002G259400 Sobic002G328100--Sobic002G259400 Sobic001G144600 Sobic001G144600 Sobic002G328100--Sobic001G144600 Sobic002G370400 Sobic002G370400 Sobic001G463800--Sobic002G370400 Sobic001G285200 Sobic001G285200 Sobic001G463800--Sobic001G285200 Sobic005G055600 Sobic005G055600 Sobic001G463800--Sobic005G055600 Sobic004G308100 Sobic004G308100 Sobic001G463800--Sobic004G308100 Sobic001G487200 Sobic001G487200 Sobic001G463800--Sobic001G487200 Sobic009G212100 Sobic009G212100 Sobic001G463800--Sobic009G212100 Sobic001G201000 Sobic001G201000 Sobic001G463800--Sobic001G201000 Sobic006G267500 Sobic006G267500 Sobic001G463800--Sobic006G267500 Sobic008G096200 Sobic008G096200 Sobic001G463800--Sobic008G096200 Sobic005G089000 Sobic005G089000 Sobic001G513600--Sobic005G089000 Sobic001G513600--Sobic002G328100 Sobic004G018400 Sobic004G018400 Sobic001G513600--Sobic004G018400 Sobic001G093600 Sobic001G093600 Sobic001G513600--Sobic001G093600 Sobic003G291400 Sobic003G291400 Sobic001G513600--Sobic003G291400 Sobic001G513600--Sobic003G245900 Sobic009G214800 Sobic009G214800 Sobic001G513600--Sobic009G214800 Sobic002G175900 Sobic002G175900 Sobic001G513600--Sobic002G175900 Sobic001G215500 Sobic001G215500 Sobic001G513600--Sobic001G215500 Sobic010G066300 Sobic010G066300 Sobic003G374200--Sobic010G066300 Sobic007G205700 Sobic007G205700 Sobic003G374200--Sobic007G205700 Sobic002G254650 Sobic002G254650 Sobic003G374200--Sobic002G254650 Sobic009G165500 Sobic009G165500 Sobic003G374200--Sobic009G165500 Sobic009G065000 Sobic009G065000 Sobic003G374200--Sobic009G065000 Sobic003G374200--Sobic010G214900 Sobic002G427900 Sobic002G427900 Sobic003G374200--Sobic002G427900 Sobic002G088700 Sobic002G088700 Sobic003G374200--Sobic002G088700 Sobic001G225600 Sobic001G225600 Sobic003G374200--Sobic001G225600 Sobic001G136500 Sobic001G136500 Sobic008G008300--Sobic001G136500 Sobic010G001800 Sobic010G001800 Sobic008G008300--Sobic010G001800 Sobic001G132900 Sobic001G132900 Sobic008G008300--Sobic001G132900 Sobic003G016400 Sobic003G016400 Sobic008G008300--Sobic003G016400 Sobic004G206300 Sobic004G206300 Sobic008G008300--Sobic004G206300 Sobic001G099800 Sobic001G099800 Sobic008G008300--Sobic001G099800 Sobic008G107900 Sobic008G107900 Sobic008G008300--Sobic008G107900 Sobic008G125000 Sobic008G125000 Sobic008G008300--Sobic008G125000 Sobic009G256700 Sobic009G256700 Sobic008G008300--Sobic009G256700 Sobic010G171501 Sobic010G171501 Sobic001G198200--Sobic010G171501 Sobic001G129400 Sobic001G129400 Sobic001G198200--Sobic001G129400 Sobic010G194200 Sobic010G194200 Sobic001G198200--Sobic010G194200 Sobic004G106700 Sobic004G106700 Sobic001G198200--Sobic004G106700 Sobic003G003000 Sobic003G003000 Sobic001G198200--Sobic003G003000 Sobic001G198200--Sobic010G214900 Sobic003G213900 Sobic003G213900 Sobic001G198200--Sobic003G213900 Sobic001G198200--Sobic004G018400 Sobic005G127100 Sobic005G127100 Sobic001G198200--Sobic005G127100 Sobic005G116900--Sobic008G008300 Sobic005G116900--Sobic002G175900 Sobic006G274500 Sobic006G274500 Sobic005G116900--Sobic006G274500 Sobic007G071100 Sobic007G071100 Sobic005G116900--Sobic007G071100 Sobic010G170900 Sobic010G170900 Sobic005G116900--Sobic010G170900 Sobic005G116900--Sobic003G016400 Sobic007G020300 Sobic007G020300 Sobic005G116900--Sobic007G020300 Sobic001G385500 Sobic001G385500 Sobic005G116900--Sobic001G385500 Sobic004G275100 Sobic004G275100 Sobic005G116900--Sobic004G275100
Octagon: transcription factors


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