Gene annotation
Transcriptome id Sobic.001G449000.1
Synonym HHP4, Sb01g042200
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
haemolysin-III, putative, expressed
UniProt C5WRT1
Pfam PF03006
Panther DB PTHR20855 PTHR20855:SF52
NCBI CDD KOG0748; Predicted membrane proteins, contain hemolysin III domain
KEGG Orthology K07297; adiponectin receptor
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT4G37680 : heptahelical protein 4
RAP-DB (Rice) LOC_Os03g13040.1 : haemolysin-III, putative, expressed
MaizeGDB (Corn) Zm00025a001401
Brachypodium PNT77834 , KQK22770 , KQK22768 , KQK22769
Barley HORVU4Hr1G066090.4 , HORVU4Hr1G066090.7 , HORVU4Hr1G066090.6
Wheat TraesCS4A02G061000 , TraesCS4A02G061000 , TraesCS4D02G237800 , TraesCS4B02G236400
Populus -


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cDNA sequences
Sobic.001G449000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G080800 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
2 Sobic.002G193500 malonyl-CoA decarboxylase, mitochondrial precursor, putative, expressed K01578: malonyl-CoA decarboxylase
3 Sobic.004G328100 expressed protein -
4 Sobic.001G485000 expressed protein -
5 Sobic.010G051800 helix-loop-helix DNA-binding domain containing protein, expressed -
6 Sobic.007G218600 phosphoribosyl transferase, putative, expressed K00761: upp, uracil phosphoribosyltransferase
7 Sobic.010G160300 RNA recognition motif containing protein, putative, expressed -
8 Sobic.002G304700 RFT1, putative, expressed K06316: oligosaccharide translocation protein RFT1
9 Sobic.007G086600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
10 Sobic.009G025200 HECT-domain domain containing protein, expressed K10590: E3 ubiquitin-protein ligase TRIP12
11 Sobic.003G308300 OsProCP1 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed K01285: lysosomal Pro-X carboxypeptidase
12 Sobic.001G050500 galactosyltransferase family protein, putative, expressed -
13 Sobic.009G017600 cupin domain containing protein, expressed -
14 Sobic.001G280500 abscisic acid insensitive 8, putative, expressed -
15 Sobic.001G427900 ASC1, putative, expressed -
16 Sobic.003G270100 dehydrin family protein, expressed -
17 Sobic.003G255700 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
18 Sobic.002G397900 39S ribosomal protein L46, mitochondrial precursor, putative, expressed K17427: large subunit ribosomal protein L46
19 Sobic.003G201500 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
20 Sobic.001G305900 GTP binding protein, putative, expressed -


Gene co-expression network
sample Sobic001G449000 Sobic001G449000 Sobic001G080800 Sobic001G080800 Sobic001G449000--Sobic001G080800 Sobic002G193500 Sobic002G193500 Sobic001G449000--Sobic002G193500 Sobic004G328100 Sobic004G328100 Sobic001G449000--Sobic004G328100 Sobic001G485000 Sobic001G485000 Sobic001G449000--Sobic001G485000 Sobic010G051800 Sobic010G051800 Sobic001G449000--Sobic010G051800 Sobic007G218600 Sobic007G218600 Sobic001G449000--Sobic007G218600 Sobic010G160300 Sobic010G160300 Sobic001G449000--Sobic010G160300 Sobic002G304700 Sobic002G304700 Sobic001G449000--Sobic002G304700 Sobic007G086600 Sobic007G086600 Sobic001G449000--Sobic007G086600 Sobic001G080800--Sobic001G485000 Sobic003G217800 Sobic003G217800 Sobic001G080800--Sobic003G217800 Sobic009G017600 Sobic009G017600 Sobic001G080800--Sobic009G017600 Sobic007G144100 Sobic007G144100 Sobic001G080800--Sobic007G144100 Sobic001G080800--Sobic004G328100 Sobic003G352900 Sobic003G352900 Sobic001G080800--Sobic003G352900 Sobic005G045800 Sobic005G045800 Sobic001G080800--Sobic005G045800 Sobic003G349900 Sobic003G349900 Sobic001G080800--Sobic003G349900 Sobic002G414800 Sobic002G414800 Sobic001G080800--Sobic002G414800 Sobic002G193500--Sobic007G086600 Sobic007G111300 Sobic007G111300 Sobic002G193500--Sobic007G111300 Sobic001G117900 Sobic001G117900 Sobic002G193500--Sobic001G117900 Sobic002G392400 Sobic002G392400 Sobic002G193500--Sobic002G392400 Sobic006G232800 Sobic006G232800 Sobic002G193500--Sobic006G232800 Sobic008G072500 Sobic008G072500 Sobic002G193500--Sobic008G072500 Sobic002G308000 Sobic002G308000 Sobic002G193500--Sobic002G308000 Sobic002G201700 Sobic002G201700 Sobic002G193500--Sobic002G201700 Sobic003G004800 Sobic003G004800 Sobic002G193500--Sobic003G004800 Sobic002G304500 Sobic002G304500 Sobic004G328100--Sobic002G304500 Sobic002G382100 Sobic002G382100 Sobic004G328100--Sobic002G382100 Sobic008G007800 Sobic008G007800 Sobic004G328100--Sobic008G007800 Sobic002G361500 Sobic002G361500 Sobic004G328100--Sobic002G361500 Sobic005G201200 Sobic005G201200 Sobic004G328100--Sobic005G201200 Sobic002G377900 Sobic002G377900 Sobic004G328100--Sobic002G377900 Sobic002G016000 Sobic002G016000 Sobic004G328100--Sobic002G016000 Sobic004G328100--Sobic001G080800 Sobic010G198400 Sobic010G198400 Sobic004G328100--Sobic010G198400 Sobic001G015000 Sobic001G015000 Sobic001G485000--Sobic001G015000 Sobic001G103600 Sobic001G103600 Sobic001G485000--Sobic001G103600 Sobic009G240500 Sobic009G240500 Sobic001G485000--Sobic009G240500 Sobic008G095500 Sobic008G095500 Sobic001G485000--Sobic008G095500 Sobic003G018000 Sobic003G018000 Sobic001G485000--Sobic003G018000 Sobic001G242200 Sobic001G242200 Sobic001G485000--Sobic001G242200 Sobic004G002700 Sobic004G002700 Sobic001G485000--Sobic004G002700 Sobic002G013550 Sobic002G013550 Sobic001G485000--Sobic002G013550 Sobic009G149100 Sobic009G149100 Sobic001G485000--Sobic009G149100 Sobic008G041300 Sobic008G041300 Sobic010G051800--Sobic008G041300 Sobic010G051800--Sobic002G016000 Sobic002G274700 Sobic002G274700 Sobic010G051800--Sobic002G274700 Sobic010G143633 Sobic010G143633 Sobic010G051800--Sobic010G143633 Sobic008G105600 Sobic008G105600 Sobic010G051800--Sobic008G105600 Sobic003G255700 Sobic003G255700 Sobic010G051800--Sobic003G255700 Sobic001G075201 Sobic001G075201 Sobic010G051800--Sobic001G075201 Sobic004G027200 Sobic004G027200 Sobic010G051800--Sobic004G027200 Sobic007G171700 Sobic007G171700 Sobic010G051800--Sobic007G171700 Sobic009G186700 Sobic009G186700 Sobic007G218600--Sobic009G186700 Sobic001G305900 Sobic001G305900 Sobic007G218600--Sobic001G305900 Sobic007G148400 Sobic007G148400 Sobic007G218600--Sobic007G148400 Sobic007G218600--Sobic003G255700 Sobic001G280500 Sobic001G280500 Sobic007G218600--Sobic001G280500 Sobic003G308300 Sobic003G308300 Sobic007G218600--Sobic003G308300 Sobic001G114200 Sobic001G114200 Sobic007G218600--Sobic001G114200 Sobic010G181600 Sobic010G181600 Sobic007G218600--Sobic010G181600 Sobic007G218600--Sobic010G160300 Sobic010G160300--Sobic002G304700 Sobic010G160300--Sobic001G280500 Sobic005G063200 Sobic005G063200 Sobic010G160300--Sobic005G063200 Sobic010G160300--Sobic001G114200 Sobic001G501900 Sobic001G501900 Sobic010G160300--Sobic001G501900 Sobic004G350700 Sobic004G350700 Sobic010G160300--Sobic004G350700 Sobic002G007800 Sobic002G007800 Sobic010G160300--Sobic002G007800 Sobic003G117800 Sobic003G117800 Sobic010G160300--Sobic003G117800 Sobic001G149000 Sobic001G149000 Sobic010G160300--Sobic001G149000 Sobic002G304700--Sobic010G160300 Sobic006G156400 Sobic006G156400 Sobic002G304700--Sobic006G156400 Sobic002G304700--Sobic001G280500 Sobic003G385300 Sobic003G385300 Sobic002G304700--Sobic003G385300 Sobic002G304700--Sobic001G149000 Sobic004G077300 Sobic004G077300 Sobic002G304700--Sobic004G077300 Sobic002G304700--Sobic002G007800 Sobic009G106700 Sobic009G106700 Sobic002G304700--Sobic009G106700 Sobic002G304700--Sobic005G063200 Sobic007G086600--Sobic003G004800 Sobic007G086600--Sobic001G117900 Sobic005G048600 Sobic005G048600 Sobic007G086600--Sobic005G048600 Sobic003G293400 Sobic003G293400 Sobic007G086600--Sobic003G293400 Sobic003G022000 Sobic003G022000 Sobic007G086600--Sobic003G022000 Sobic002G348400 Sobic002G348400 Sobic007G086600--Sobic002G348400 Sobic001G433600 Sobic001G433600 Sobic007G086600--Sobic001G433600 Sobic007G086600--Sobic002G193500 Sobic009G201000 Sobic009G201000 Sobic007G086600--Sobic009G201000
Octagon: transcription factors


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