Gene annotation
| Transcriptome id | Sobic.001G470800.1 |
|---|---|
| Synonym | 1, Sb01g044100, AST68, SULTR2 |
| Functional annotation | sulfate transporter, putative, expressed |
| UniProt | C5WUP6 |
| Pfam | PF01740 PF00916 |
| Panther DB | PTHR11814 PTHR11814:SF61 |
| NCBI CDD | - |
| KEGG Orthology | K17469; sulfate transporter 2, low-affinity |
| Gene Ontology | GO:0016021; integral component of membrane GO:0015116sulfate transmembrane transporter activity GO:0008272sulfate transport GO:0016020membrane GO:0008271secondary active sulfate transmembrane transporter activity |
Orthologs (automatic annotation)
| TAIR | AT5G10180 : slufate transporter 2;1 |
|---|---|
| RAP-DB (Rice) | LOC_Os03g09940.1 : sulfate transporter, putative, expressed |
| MaizeGDB (Corn) | Zm00025a001229 |
| Brachypodium | KQK23148 |
| Barley | HORVU4Hr1G071250.17 , HORVU4Hr1G071250.19 , HORVU4Hr1G071250.18 , HORVU4Hr1G071250.13 , HORVU4Hr1G071250.12 , HORVU4Hr1G071250.11 , HORVU4Hr1G071250.10 , HORVU4Hr1G071250.16 , HORVU4Hr1G071250.15 , HORVU4Hr1G071250.14 , HORVU4Hr1G071250.9 , HORVU4Hr1G071250.8 , HORVU4Hr1G071250.3 , HORVU4Hr1G071250.2 , HORVU4Hr1G071250.1 , HORVU4Hr1G071250.7 , HORVU4Hr1G071250.6 , HORVU4Hr1G071250.5 , HORVU4Hr1G071250.4 , HORVU4Hr1G071250.22 , HORVU4Hr1G071250.23 , HORVU4Hr1G071250.20 , HORVU4Hr1G071250.21 , HORVU4Hr1G071250.26 , HORVU4Hr1G071250.27 , HORVU4Hr1G071250.24 , HORVU4Hr1G071250.25 , HORVU4Hr1G071250.28 , HORVU4Hr1G071250.29 |
| Wheat | TraesCS4A02G043500 , TraesCS4D02G264200 , TraesCS4B02G264100 |
| Populus | - |
JBrowse
| Sobic.001G470800 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.006G102000 | PAP fibrillin family domain containing protein, expressed | - |
| 2 | Sobic.004G046500 | GTP-binding protein lepA, putative, expressed | K03596: GTP-binding protein LepA |
| 3 | Sobic.001G289500 | kinase, pfkB family, putative, expressed | - |
| 4 | Sobic.001G303200 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed | - |
| 5 | Sobic.006G221000 | starch synthase 3(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@soluble starch synthase 3, chloroplast precursor, putative, expressed | - |
| 6 | Sobic.003G166200 | expressed protein | - |
| 7 | Sobic.007G093900 | acetyltransferase, GNAT family, putative, expressed | - |
| 8 | Sobic.007G007200 | - | - |
| 9 | Sobic.001G283100 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@lrgB-like family protein, expressed | - |
| 10 | Sobic.009G237000 | OsDegp9 - Putative Deg protease homologue, expressed | - |
| 11 | Sobic.004G353100 | -(PubMedID : 26976818)@phosphate/phosphate translocator, putative, expressed | K15283: solute carrier family 35, member E1 |
| 12 | Sobic.001G015200 | Unnamed(PubMedID : 24676859)@S1 RNA binding domain containing protein, expressed | - |
| 13 | Sobic.001G100000 | glucose-1-phosphate adenylyltransferase large subunit, putative, expressed | K00975: glucose-1-phosphate adenylyltransferase |
| 14 | Sobic.009G073900 | thioredoxin, putative, expressed | - |
| 15 | Sobic.003G003450 | - | K01177: beta-amylase |
| 16 | Sobic.007G108900 | APE1, putative, expressed | - |
| 17 | Sobic.004G317700 | tRNA synthetase class I, putative, expressed | K01870: IARS, isoleucyl-tRNA synthetase |
| 18 | Sobic.001G436400 | immature colon carcinoma transcript 1 protein precursor, putative, expressed | K15033: peptidyl-tRNA hydrolase ICT1 |
| 19 | Sobic.001G207800 | integral membrane protein, putative, expressed | - |
| 20 | Sobic.002G275300 | deoxyribodipyrimidine photolyase family protein, expressed | - |
Gene co-expression network
Octagon: transcription factors
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