Gene annotation
Transcriptome id Sobic.001G477650.1
Synonym -
Functional annotation -
UniProt A0A1Z5SB02
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G264400 metallo-beta-lactamase family protein, putative, expressed K01069: gloB, gloC, hydroxyacylglutathione hydrolase
2 Sobic.002G267500 hydrolase, alpha/beta fold family domain containing protein, expressed -
3 Sobic.003G220600 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
4 Sobic.002G413000 AAA-type ATPase family protein, putative, expressed -
5 Sobic.001G158500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@LSD1 zinc finger domain containing protein, expressed -
6 Sobic.010G253800 expressed protein -
7 Sobic.006G264300 GA18008-PA, putative, expressed -
8 Sobic.004G293700 peroxisomal biogenesis factor 19, putative, expressed K13337: peroxin-19
9 Sobic.007G059900 DUF292 domain containing protein, expressed -
10 Sobic.002G345300 ZOS7-05 - C2H2 zinc finger protein, expressed -
11 Sobic.003G075500 mitochondrial carrier protein, putative, expressed -
12 Sobic.002G045300 ubiquitin-conjugating enzyme, putative, expressed K10573: UBE2A, UBC2, ubiquitin-conjugating enzyme E2 A
13 Sobic.003G253000 ubiquitin-conjugating enzyme, putative, expressed K10580: UBE2N, BLU, ubiquitin-conjugating enzyme E2 N
14 Sobic.006G204300 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transcription factor TF2, putative, expressed -
15 Sobic.010G149300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
16 Sobic.002G202300 vesicle transport v-SNARE protein, putative, expressed K08495: GOSR1, golgi SNAP receptor complex member 1
17 Sobic.010G224200 MYB family transcription factor, putative, expressed -
18 Sobic.010G185500 ethanol tolerance protein GEKO1, putative, expressed K09716: dtdA, D-aminoacyl-tRNA deacylase
19 Sobic.008G033600 Pyruvate kinase family protein(PubMedID : 26465154)@pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
20 Sobic.001G329100 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -


Gene co-expression network
sample Sobic001G477650 Sobic001G477650 Sobic002G264400 Sobic002G264400 Sobic001G477650--Sobic002G264400 Sobic002G267500 Sobic002G267500 Sobic001G477650--Sobic002G267500 Sobic003G220600 Sobic003G220600 Sobic001G477650--Sobic003G220600 Sobic002G413000 Sobic002G413000 Sobic001G477650--Sobic002G413000 Sobic001G158500 Sobic001G158500 Sobic001G477650--Sobic001G158500 Sobic010G253800 Sobic010G253800 Sobic001G477650--Sobic010G253800 Sobic006G264300 Sobic006G264300 Sobic001G477650--Sobic006G264300 Sobic004G293700 Sobic004G293700 Sobic001G477650--Sobic004G293700 Sobic007G059900 Sobic007G059900 Sobic001G477650--Sobic007G059900 Sobic002G264400--Sobic006G264300 Sobic002G264400--Sobic004G293700 Sobic002G264400--Sobic002G267500 Sobic002G180600 Sobic002G180600 Sobic002G264400--Sobic002G180600 Sobic003G253000 Sobic003G253000 Sobic002G264400--Sobic003G253000 Sobic002G202300 Sobic002G202300 Sobic002G264400--Sobic002G202300 Sobic002G264400--Sobic010G253800 Sobic005G034400 Sobic005G034400 Sobic002G264400--Sobic005G034400 Sobic003G075500 Sobic003G075500 Sobic002G264400--Sobic003G075500 Sobic001G281400 Sobic001G281400 Sobic002G267500--Sobic001G281400 Sobic004G272800 Sobic004G272800 Sobic002G267500--Sobic004G272800 Sobic002G046100 Sobic002G046100 Sobic002G267500--Sobic002G046100 Sobic002G267500--Sobic003G253000 Sobic010G149300 Sobic010G149300 Sobic002G267500--Sobic010G149300 Sobic002G345300 Sobic002G345300 Sobic002G267500--Sobic002G345300 Sobic001G459200 Sobic001G459200 Sobic002G267500--Sobic001G459200 Sobic009G143400 Sobic009G143400 Sobic002G267500--Sobic009G143400 Sobic006G173900 Sobic006G173900 Sobic002G267500--Sobic006G173900 Sobic003G248600 Sobic003G248600 Sobic003G220600--Sobic003G248600 Sobic003G220600--Sobic002G202300 Sobic003G220600--Sobic003G253000 Sobic003G115800 Sobic003G115800 Sobic003G220600--Sobic003G115800 Sobic003G220600--Sobic007G059900 Sobic003G220600--Sobic004G293700 Sobic004G300900 Sobic004G300900 Sobic003G220600--Sobic004G300900 Sobic003G367451 Sobic003G367451 Sobic003G220600--Sobic003G367451 Sobic009G146100 Sobic009G146100 Sobic003G220600--Sobic009G146100 Sobic010G052800 Sobic010G052800 Sobic002G413000--Sobic010G052800 Sobic009G193400 Sobic009G193400 Sobic002G413000--Sobic009G193400 Sobic002G413000--Sobic004G293700 Sobic002G413000--Sobic003G220600 Sobic001G031600 Sobic001G031600 Sobic002G413000--Sobic001G031600 Sobic002G413000--Sobic007G059900 Sobic004G079100 Sobic004G079100 Sobic002G413000--Sobic004G079100 Sobic003G002400 Sobic003G002400 Sobic002G413000--Sobic003G002400 Sobic001G329100 Sobic001G329100 Sobic002G413000--Sobic001G329100 Sobic004G102400 Sobic004G102400 Sobic001G158500--Sobic004G102400 Sobic001G057800 Sobic001G057800 Sobic001G158500--Sobic001G057800 Sobic002G375300 Sobic002G375300 Sobic001G158500--Sobic002G375300 Sobic001G158500--Sobic003G367451 Sobic002G083266 Sobic002G083266 Sobic001G158500--Sobic002G083266 Sobic001G433400 Sobic001G433400 Sobic001G158500--Sobic001G433400 Sobic001G158500--Sobic002G264400 Sobic002G385900 Sobic002G385900 Sobic001G158500--Sobic002G385900 Sobic001G085900 Sobic001G085900 Sobic001G158500--Sobic001G085900 Sobic010G253800--Sobic009G146100 Sobic010G253800--Sobic004G293700 Sobic010G083700 Sobic010G083700 Sobic010G253800--Sobic010G083700 Sobic002G247500 Sobic002G247500 Sobic010G253800--Sobic002G247500 Sobic002G352700 Sobic002G352700 Sobic010G253800--Sobic002G352700 Sobic001G007200 Sobic001G007200 Sobic010G253800--Sobic001G007200 Sobic006G263900 Sobic006G263900 Sobic010G253800--Sobic006G263900 Sobic009G171700 Sobic009G171700 Sobic010G253800--Sobic009G171700 Sobic001G054200 Sobic001G054200 Sobic010G253800--Sobic001G054200 Sobic006G264300--Sobic002G264400 Sobic006G264300--Sobic002G083266 Sobic006G264300--Sobic002G202300 Sobic006G264300--Sobic002G180600 Sobic006G264300--Sobic002G267500 Sobic006G264300--Sobic001G329100 Sobic009G149400 Sobic009G149400 Sobic006G264300--Sobic009G149400 Sobic006G264300--Sobic005G034400 Sobic006G264300--Sobic003G253000 Sobic004G293700--Sobic010G253800 Sobic004G293700--Sobic004G079100 Sobic004G293700--Sobic010G083700 Sobic004G293700--Sobic001G054200 Sobic004G248800 Sobic004G248800 Sobic004G293700--Sobic004G248800 Sobic004G293700--Sobic009G171700 Sobic004G293700--Sobic002G264400 Sobic006G141500 Sobic006G141500 Sobic004G293700--Sobic006G141500 Sobic004G293700--Sobic003G220600 Sobic007G059900--Sobic003G220600 Sobic006G062800 Sobic006G062800 Sobic007G059900--Sobic006G062800 Sobic010G204300 Sobic010G204300 Sobic007G059900--Sobic010G204300 Sobic007G186300 Sobic007G186300 Sobic007G059900--Sobic007G186300 Sobic002G261900 Sobic002G261900 Sobic007G059900--Sobic002G261900 Sobic008G161000 Sobic008G161000 Sobic007G059900--Sobic008G161000 Sobic007G059900--Sobic004G293700 Sobic002G296300 Sobic002G296300 Sobic007G059900--Sobic002G296300 Sobic009G152200 Sobic009G152200 Sobic007G059900--Sobic009G152200
Octagon: transcription factors


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