Gene annotation
Transcriptome id Sobic.001G497500.1
Synonym Sb01g046470
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5WWZ6
Pfam -
Panther DB PTHR33879 PTHR33879:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G22530 : -
RAP-DB (Rice) LOC_Os03g06390.1 : expressed protein
MaizeGDB (Corn) Zm00025a000747
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G177100 "Syntelog of ZmMYB42, bind to the COMT1, CSE, 4CL2, F5H, and SbMYB42 promroter region"(PubMedID : 30387379)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
2 Sobic.004G166400 expressed protein -
3 Sobic.009G075900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09874: aquaporin NIP
4 Sobic.009G159200 guanylyl cyclase, putative, expressed -
5 Sobic.001G311000 expansin precursor, putative, expressed -
6 Sobic.002G254200 expressed protein -
7 Sobic.003G402300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@P21-Rho-binding domain containing protein, putative, expressed -
8 Sobic.003G293900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@plant-specific domain TIGR01615 family protein, expressed -
9 Sobic.002G421600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed -
10 Sobic.002G291300 hydrolase, NUDIX family protein, expressed K18453: ADP-ribose/FAD diphosphatase
11 Sobic.007G126100 trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
12 Sobic.002G353800 homeobox domain containing protein, expressed K09338: homeobox-leucine zipper protein
13 Sobic.003G334600 NAC domain transcription factor, putative, expressed -
14 Sobic.004G164500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
15 Sobic.009G070400 expressed protein -
16 Sobic.004G075000 expressed protein -
17 Sobic.010G030401 - -
18 Sobic.001G230700 RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
19 Sobic.006G159300 remorin, putative, expressed -
20 Sobic.006G191600 expressed protein -


Gene co-expression network
sample Sobic001G497500 Sobic001G497500 Sobic007G177100 Sobic007G177100 Sobic001G497500--Sobic007G177100 Sobic004G166400 Sobic004G166400 Sobic001G497500--Sobic004G166400 Sobic009G075900 Sobic009G075900 Sobic001G497500--Sobic009G075900 Sobic009G159200 Sobic009G159200 Sobic001G497500--Sobic009G159200 Sobic001G311000 Sobic001G311000 Sobic001G497500--Sobic001G311000 Sobic002G254200 Sobic002G254200 Sobic001G497500--Sobic002G254200 Sobic003G402300 Sobic003G402300 Sobic001G497500--Sobic003G402300 Sobic003G293900 Sobic003G293900 Sobic001G497500--Sobic003G293900 Sobic002G421600 Sobic002G421600 Sobic001G497500--Sobic002G421600 Sobic007G177100--Sobic009G159200 Sobic007G126100 Sobic007G126100 Sobic007G177100--Sobic007G126100 Sobic004G212900 Sobic004G212900 Sobic007G177100--Sobic004G212900 Sobic006G157500 Sobic006G157500 Sobic007G177100--Sobic006G157500 Sobic007G177100--Sobic004G166400 Sobic010G030401 Sobic010G030401 Sobic007G177100--Sobic010G030401 Sobic007G177100--Sobic002G254200 Sobic007G197600 Sobic007G197600 Sobic007G177100--Sobic007G197600 Sobic003G360000 Sobic003G360000 Sobic007G177100--Sobic003G360000 Sobic004G166400--Sobic007G177100 Sobic004G166400--Sobic009G075900 Sobic004G166400--Sobic009G159200 Sobic002G314700 Sobic002G314700 Sobic004G166400--Sobic002G314700 Sobic010G166500 Sobic010G166500 Sobic004G166400--Sobic010G166500 Sobic003G334600 Sobic003G334600 Sobic004G166400--Sobic003G334600 Sobic004G166400--Sobic002G254200 Sobic009G221400 Sobic009G221400 Sobic004G166400--Sobic009G221400 Sobic003G297600 Sobic003G297600 Sobic004G166400--Sobic003G297600 Sobic002G353800 Sobic002G353800 Sobic009G075900--Sobic002G353800 Sobic002G416600 Sobic002G416600 Sobic009G075900--Sobic002G416600 Sobic003G303100 Sobic003G303100 Sobic009G075900--Sobic003G303100 Sobic004G225900 Sobic004G225900 Sobic009G075900--Sobic004G225900 Sobic001G025300 Sobic001G025300 Sobic009G075900--Sobic001G025300 Sobic009G075900--Sobic009G159200 Sobic003G087300 Sobic003G087300 Sobic009G075900--Sobic003G087300 Sobic001G070800 Sobic001G070800 Sobic009G075900--Sobic001G070800 Sobic006G154500 Sobic006G154500 Sobic009G075900--Sobic006G154500 Sobic009G159200--Sobic007G197600 Sobic009G159200--Sobic007G177100 Sobic009G159200--Sobic002G353800 Sobic009G159200--Sobic001G070800 Sobic009G159200--Sobic006G157500 Sobic009G159200--Sobic009G075900 Sobic003G379800 Sobic003G379800 Sobic009G159200--Sobic003G379800 Sobic003G393700 Sobic003G393700 Sobic009G159200--Sobic003G393700 Sobic004G203700 Sobic004G203700 Sobic009G159200--Sobic004G203700 Sobic004G164500 Sobic004G164500 Sobic001G311000--Sobic004G164500 Sobic009G065000 Sobic009G065000 Sobic001G311000--Sobic009G065000 Sobic006G191600 Sobic006G191600 Sobic001G311000--Sobic006G191600 Sobic001G311000--Sobic007G177100 Sobic001G311000--Sobic003G402300 Sobic001G311000--Sobic007G126100 Sobic008G106800 Sobic008G106800 Sobic001G311000--Sobic008G106800 Sobic006G257900 Sobic006G257900 Sobic001G311000--Sobic006G257900 Sobic001G311000--Sobic003G293900 Sobic001G225200 Sobic001G225200 Sobic002G254200--Sobic001G225200 Sobic001G225300 Sobic001G225300 Sobic002G254200--Sobic001G225300 Sobic006G269200 Sobic006G269200 Sobic002G254200--Sobic006G269200 Sobic002G254200--Sobic006G154500 Sobic002G254200--Sobic007G177100 Sobic002G254200--Sobic006G191600 Sobic002G254200--Sobic009G159200 Sobic002G254200--Sobic006G157500 Sobic002G254200--Sobic007G126100 Sobic003G402300--Sobic006G157500 Sobic003G402300--Sobic007G177100 Sobic003G402300--Sobic004G164500 Sobic003G402300--Sobic002G353800 Sobic002G339100 Sobic002G339100 Sobic003G402300--Sobic002G339100 Sobic003G402300--Sobic001G311000 Sobic003G402300--Sobic009G159200 Sobic007G090463 Sobic007G090463 Sobic003G402300--Sobic007G090463 Sobic001G372100 Sobic001G372100 Sobic003G402300--Sobic001G372100 Sobic003G296600 Sobic003G296600 Sobic003G293900--Sobic003G296600 Sobic009G030100 Sobic009G030100 Sobic003G293900--Sobic009G030100 Sobic001G032100 Sobic001G032100 Sobic003G293900--Sobic001G032100 Sobic006G194150 Sobic006G194150 Sobic003G293900--Sobic006G194150 Sobic003G293900--Sobic002G421600 Sobic001G247400 Sobic001G247400 Sobic003G293900--Sobic001G247400 Sobic002G330700 Sobic002G330700 Sobic003G293900--Sobic002G330700 Sobic003G293900--Sobic001G311000 Sobic003G293900--Sobic007G126100 Sobic002G421600--Sobic007G126100 Sobic002G421600--Sobic006G269200 Sobic002G421600--Sobic007G177100 Sobic002G421600--Sobic002G254200 Sobic003G034400 Sobic003G034400 Sobic002G421600--Sobic003G034400 Sobic002G421600--Sobic003G293900 Sobic002G421600--Sobic001G225200 Sobic006G047000 Sobic006G047000 Sobic002G421600--Sobic006G047000 Sobic006G241600 Sobic006G241600 Sobic002G421600--Sobic006G241600
Octagon: transcription factors


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