Gene annotation
Transcriptome id Sobic.002G026300.1
Synonym Sb02g002390
Functional annotation pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed
UniProt A0A1B6Q8W1
Pfam PF00365
Panther DB PTHR13697 PTHR13697:SF22
NCBI CDD KOG2440; Pyrophosphate-dependent phosphofructo-1-kinase
KEGG Orthology K00895; pfp, diphosphate-dependent phosphofructokinase
Gene Ontology GO:0006096; glycolytic process GO:00038726-phosphofructokinase activity


Orthologs (automatic annotation)
TAIR AT1G76550 : Phosphofructokinase family protein
RAP-DB (Rice) LOC_Os08g25720.1 : pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed
MaizeGDB (Corn) Zm00025a046348 , Zm00025a037886 , Zm00025a052590 , Zm00025a006225 , Zm00025a039542
Brachypodium KQJ96294
Barley HORVU5Hr1G019030.38 , HORVU5Hr1G019030.39 , HORVU5Hr1G019030.30 , HORVU5Hr1G019030.31 , HORVU5Hr1G019030.32 , HORVU5Hr1G019030.33 , HORVU5Hr1G019030.34 , HORVU5Hr1G019030.35 , HORVU5Hr1G019030.36 , HORVU5Hr1G019030.37 , HORVU5Hr1G019030.12 , HORVU5Hr1G019030.13 , HORVU5Hr1G019030.10 , HORVU5Hr1G019030.11 , HORVU5Hr1G019030.16 , HORVU5Hr1G019030.17 , HORVU5Hr1G019030.14 , HORVU5Hr1G019030.15 , HORVU5Hr1G019030.18 , HORVU5Hr1G019030.19 , HORVU5Hr1G019030.41 , HORVU5Hr1G019030.40 , HORVU5Hr1G019030.43 , HORVU5Hr1G019030.42 , HORVU5Hr1G019030.8 , HORVU5Hr1G019030.9 , HORVU5Hr1G019030.1 , HORVU5Hr1G019030.3 , HORVU5Hr1G019030.5 , HORVU5Hr1G019030.6 , HORVU5Hr1G019030.7 , HORVU5Hr1G019030.29 , HORVU5Hr1G019030.28 , HORVU5Hr1G019030.23 , HORVU5Hr1G019030.22 , HORVU5Hr1G019030.21 , HORVU5Hr1G019030.20 , HORVU5Hr1G019030.27 , HORVU5Hr1G019030.26 , HORVU5Hr1G019030.24
Wheat TraesCS5D02G085500 , TraesCS5D02G085500 , TraesCS5D02G085500 , TraesCS5D02G085500 , TraesCS5D02G085500 , TraesCS5D02G085500 , TraesCS5B02G078300 , TraesCS5A02G072700 , TraesCS5A02G072700 , TraesCS5A02G072700 , TraesCS5A02G072700
Populus -


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cDNA sequences
Sobic.002G026300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G036000 NADP-ME(PubMedID : 19549309)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADP-malic enzyme(PubMedID : 26904072)@-(PubMedID : 26976818)@NADP-dependent malic enzyme(PubMedID : 27016024)@NADP-dependent malic enzyme, chloroplast precursor, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
2 Sobic.007G101800 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed -
3 Sobic.010G105800 calmodulin-binding heat-shock protein, putative, expressed -
4 Sobic.010G228000 Protein kinase domain containing protein, expressed -
5 Sobic.010G225100 DUF640 domain containing protein, putative, expressed -
6 Sobic.010G041700 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
7 Sobic.009G208800 hydrolase, acting on carbon-nitrogen, putative, expressed -
8 Sobic.003G035700 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA2 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
9 Sobic.007G188100 Candidate orthologue to the wheat Pm40 gene(PubMedID : 27755575)@protein kinase domain containing protein, expressed K13429: chitin elicitor receptor kinase 1
10 Sobic.010G200700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.008G151300 expressed protein -
12 Sobic.002G272900 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
13 Sobic.008G074900 - -
14 Sobic.004G145200 membrane attack complex component/perforin/complement C9, putative, expressed -
15 Sobic.004G280800 Tannin1 encodes a WD40 protein homologous to the Arabidopsis proanthocyanidin regulator transparent testa glabra1 (TTG1). (PubmedID : 25272193)@WD40 protein(PubMedID : 22699509)@Transcription factor for tannin accumulation in seed(PubMedID : 22699509)@WD domain, G-beta repeat domain containing protein, expressed K11805: DCAF7, DDB1- and CUL4-associated factor 7
16 Sobic.001G516600 AMP-binding domain containing protein, expressed K10526: OPC-8:0 CoA ligase 1
17 Sobic.004G333900 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
18 Sobic.006G263100 expressed protein -
19 Sobic.006G131400 expressed protein -
20 Sobic.001G206400 fiber protein Fb34, putative, expressed -


Gene co-expression network
sample Sobic002G026300 Sobic002G026300 Sobic003G036000 Sobic003G036000 Sobic002G026300--Sobic003G036000 Sobic007G101800 Sobic007G101800 Sobic002G026300--Sobic007G101800 Sobic010G105800 Sobic010G105800 Sobic002G026300--Sobic010G105800 Sobic010G228000 Sobic010G228000 Sobic002G026300--Sobic010G228000 Sobic010G225100 Sobic010G225100 Sobic002G026300--Sobic010G225100 Sobic010G041700 Sobic010G041700 Sobic002G026300--Sobic010G041700 Sobic009G208800 Sobic009G208800 Sobic002G026300--Sobic009G208800 Sobic003G035700 Sobic003G035700 Sobic002G026300--Sobic003G035700 Sobic007G188100 Sobic007G188100 Sobic002G026300--Sobic007G188100 Sobic009G159900 Sobic009G159900 Sobic003G036000--Sobic009G159900 Sobic006G208800 Sobic006G208800 Sobic003G036000--Sobic006G208800 Sobic006G263100 Sobic006G263100 Sobic003G036000--Sobic006G263100 Sobic003G036000--Sobic007G101800 Sobic003G036000--Sobic002G026300 Sobic007G011000 Sobic007G011000 Sobic003G036000--Sobic007G011000 Sobic003G056500 Sobic003G056500 Sobic003G036000--Sobic003G056500 Sobic010G200700 Sobic010G200700 Sobic003G036000--Sobic010G200700 Sobic010G052800 Sobic010G052800 Sobic003G036000--Sobic010G052800 Sobic009G170100 Sobic009G170100 Sobic007G101800--Sobic009G170100 Sobic004G300300 Sobic004G300300 Sobic007G101800--Sobic004G300300 Sobic010G265600 Sobic010G265600 Sobic007G101800--Sobic010G265600 Sobic007G101800--Sobic010G105800 Sobic001G473900 Sobic001G473900 Sobic007G101800--Sobic001G473900 Sobic009G071800 Sobic009G071800 Sobic007G101800--Sobic009G071800 Sobic006G032200 Sobic006G032200 Sobic007G101800--Sobic006G032200 Sobic002G203000 Sobic002G203000 Sobic007G101800--Sobic002G203000 Sobic004G084100 Sobic004G084100 Sobic007G101800--Sobic004G084100 Sobic001G101500 Sobic001G101500 Sobic010G105800--Sobic001G101500 Sobic001G197400 Sobic001G197400 Sobic010G105800--Sobic001G197400 Sobic010G105800--Sobic009G208800 Sobic010G105800--Sobic007G101800 Sobic002G248100 Sobic002G248100 Sobic010G105800--Sobic002G248100 Sobic008G074900 Sobic008G074900 Sobic010G105800--Sobic008G074900 Sobic001G077700 Sobic001G077700 Sobic010G105800--Sobic001G077700 Sobic010G105800--Sobic009G071800 Sobic008G177800 Sobic008G177800 Sobic010G105800--Sobic008G177800 Sobic002G374100 Sobic002G374100 Sobic010G228000--Sobic002G374100 Sobic002G118600 Sobic002G118600 Sobic010G228000--Sobic002G118600 Sobic010G228000--Sobic007G188100 Sobic002G294700 Sobic002G294700 Sobic010G228000--Sobic002G294700 Sobic002G330300 Sobic002G330300 Sobic010G228000--Sobic002G330300 Sobic004G280800 Sobic004G280800 Sobic010G228000--Sobic004G280800 Sobic010G246000 Sobic010G246000 Sobic010G228000--Sobic010G246000 Sobic002G379400 Sobic002G379400 Sobic010G228000--Sobic002G379400 Sobic001G290400 Sobic001G290400 Sobic010G228000--Sobic001G290400 Sobic004G333900 Sobic004G333900 Sobic010G225100--Sobic004G333900 Sobic006G131400 Sobic006G131400 Sobic010G225100--Sobic006G131400 Sobic006G179500 Sobic006G179500 Sobic010G225100--Sobic006G179500 Sobic002G359300 Sobic002G359300 Sobic010G225100--Sobic002G359300 Sobic003G300800 Sobic003G300800 Sobic010G225100--Sobic003G300800 Sobic002G272900 Sobic002G272900 Sobic010G225100--Sobic002G272900 Sobic005G103300 Sobic005G103300 Sobic010G225100--Sobic005G103300 Sobic001G516600 Sobic001G516600 Sobic010G225100--Sobic001G516600 Sobic010G225100--Sobic002G294700 Sobic009G046600 Sobic009G046600 Sobic010G041700--Sobic009G046600 Sobic005G010200 Sobic005G010200 Sobic010G041700--Sobic005G010200 Sobic006G089300 Sobic006G089300 Sobic010G041700--Sobic006G089300 Sobic007G151100 Sobic007G151100 Sobic010G041700--Sobic007G151100 Sobic010G041700--Sobic002G374100 Sobic009G066800 Sobic009G066800 Sobic010G041700--Sobic009G066800 Sobic009G129000 Sobic009G129000 Sobic010G041700--Sobic009G129000 Sobic001G483400 Sobic001G483400 Sobic010G041700--Sobic001G483400 Sobic010G041700--Sobic002G272900 Sobic001G173300 Sobic001G173300 Sobic009G208800--Sobic001G173300 Sobic004G257300 Sobic004G257300 Sobic009G208800--Sobic004G257300 Sobic009G220200 Sobic009G220200 Sobic009G208800--Sobic009G220200 Sobic003G296700 Sobic003G296700 Sobic009G208800--Sobic003G296700 Sobic009G208800--Sobic001G516600 Sobic007G057100 Sobic007G057100 Sobic009G208800--Sobic007G057100 Sobic009G208800--Sobic002G294700 Sobic005G231700 Sobic005G231700 Sobic009G208800--Sobic005G231700 Sobic009G208800--Sobic008G177800 Sobic003G423500 Sobic003G423500 Sobic003G035700--Sobic003G423500 Sobic004G147900 Sobic004G147900 Sobic003G035700--Sobic004G147900 Sobic003G035700--Sobic010G200700 Sobic004G195300 Sobic004G195300 Sobic003G035700--Sobic004G195300 Sobic004G297200 Sobic004G297200 Sobic003G035700--Sobic004G297200 Sobic010G078600 Sobic010G078600 Sobic003G035700--Sobic010G078600 Sobic003G035700--Sobic001G290400 Sobic003G012800 Sobic003G012800 Sobic003G035700--Sobic003G012800 Sobic001G482700 Sobic001G482700 Sobic003G035700--Sobic001G482700 Sobic007G188100--Sobic010G228000 Sobic002G362900 Sobic002G362900 Sobic007G188100--Sobic002G362900 Sobic002G353400 Sobic002G353400 Sobic007G188100--Sobic002G353400 Sobic007G188100--Sobic002G374100 Sobic004G259500 Sobic004G259500 Sobic007G188100--Sobic004G259500 Sobic008G016900 Sobic008G016900 Sobic007G188100--Sobic008G016900 Sobic007G188100--Sobic002G330300 Sobic010G062800 Sobic010G062800 Sobic007G188100--Sobic010G062800 Sobic007G188100--Sobic002G118600
Octagon: transcription factors


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