Gene annotation
Transcriptome id Sobic.002G051900.1
Synonym HSFA6B, AT-HSFA6B, Heat Shock Transcription Factors, SbHsf13, Hsf13;Heat shock transcription factor 13, Sb02g004370
Functional annotation high level expression during drought stress (PubMedID : 27006630)
RHsf 5 (PubMedID : 27006630)
heat stress transcription factor, putative, expressed
UniProt C5XB03
Pfam PF00447
Panther DB PTHR10015 PTHR10015:SF198
NCBI CDD KOG0627; Heat shock transcription factor
KEGG Orthology K09419; heat shock transcription factor, other eukaryote
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005634nucleus GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT3G22830 : heat shock transcription factor A6B
RAP-DB (Rice) LOC_Os07g08140.1 : heat stress transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a008110 , Zm00025a045167 , Zm00025a015267 , Zm00025a038009 , Zm00025a040051 , Zm00025a051078 , Zm00025a008557 , Zm00025a048930 , Zm00025a002613 , Zm00025a033648 , Zm00025a020360
Brachypodium KQJ94147 , KQK13249 , KQK05247 , KQK14978 , KQK14979 , KQK05248 , PNT68735 , KQK08811 , KQK18031 , KQK12714 , KQK18032 , KQJ99265 , KQK23525 , PNT72861 , PNT72862 , KQK13250 , PNT77358 , PNT70844 , KQJ99684 , PNT74158 , KQK20612 , KQK20613 , PNT74155 , PNT74157 , KQK21569 , PNT72425 , KQK09735 , KQK23526 , PNT74156
Barley HORVU1Hr1G083420.8 , HORVU1Hr1G083420.9 , HORVU1Hr1G083420.4 , HORVU1Hr1G083420.5 , HORVU1Hr1G083420.6 , HORVU1Hr1G083420.7 , HORVU1Hr1G083420.1 , HORVU1Hr1G083420.2 , HORVU1Hr1G083420.3 , HORVU1Hr1G083420.16 , HORVU1Hr1G083420.17 , HORVU1Hr1G083420.14 , HORVU1Hr1G083420.15 , HORVU1Hr1G083420.12 , HORVU1Hr1G083420.13 , HORVU1Hr1G083420.10 , HORVU1Hr1G083420.11 , HORVU0Hr1G002020.1 , HORVU2Hr1G026020.1 , HORVU1Hr1G081300.5 , HORVU3Hr1G071550.3 , HORVU3Hr1G071550.2 , HORVU3Hr1G071550.1 , HORVU1Hr1G081300.4 , HORVU1Hr1G081300.3 , HORVU1Hr1G081300.2 , HORVU3Hr1G071550.5 , HORVU3Hr1G071550.4 , HORVU1Hr1G081300.1 , HORVU7Hr1G088920.2 , HORVU7Hr1G088920.3 , HORVU7Hr1G088920.1 , HORVU3Hr1G088890.2 , HORVU3Hr1G088890.1 , HORVU2Hr1G014590.4 , HORVU2Hr1G014590.3 , HORVU2Hr1G014590.2 , HORVU2Hr1G014590.1 , HORVU4Hr1G073650.5 , HORVU4Hr1G073650.4 , HORVU4Hr1G073650.7 , HORVU4Hr1G073650.6 , HORVU4Hr1G073650.1 , HORVU4Hr1G073650.3 , HORVU4Hr1G073650.2 , HORVU3Hr1G055960.4 , HORVU3Hr1G055960.5 , HORVU3Hr1G055960.1 , HORVU3Hr1G055960.2 , HORVU3Hr1G055960.3 , HORVU3Hr1G069590.2 , HORVU5Hr1G105770.4 , HORVU5Hr1G105770.1 , HORVU5Hr1G105770.3 , HORVU5Hr1G105770.2 , HORVU3Hr1G069590.3 , HORVU3Hr1G069590.1 , HORVU3Hr1G069590.4
Wheat TraesCS3A02G393200 , TraesCS3A02G280800 , TraesCS5A02G383800 , TraesCS5D02G393200 , TraesCS3B02G323800 , TraesCS3D02G386000 , TraesCS2D02G211400 , TraesCS2D02G211400 , TraesCS2B02G105100 , TraesCS1A02G375600 , TraesCS3A02G289200 , TraesCS2A02G146600 , TraesCS1A02G375600 , TraesCS2A02G089300 , TraesCS2D02G151200 , TraesCS7A02G355300 , TraesCS7D02G367700 , TraesCS2B02G171900 , TraesCS2B02G232000 , TraesCS2B02G232000 , TraesCS2A02G204500 , TraesCS2A02G204500 , TraesCS3A02G229000 , TraesCS4A02G027700 , TraesCS3B02G438900 , TraesCS3B02G255600 , TraesCS3D02G227200 , TraesCS3D02G280600 , TraesCS7B02G272500 , TraesCS2D02G087400 , TraesCS3D02G385900 , TraesCS1D02G382900 , TraesCS3A02G405200 , TraesCS1B02G396000
Populus PNT39523


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cDNA sequences
Sobic.002G051900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G199800 BTB/POZ domain containing protein, expressed K10523: speckle-type POZ protein
2 Sobic.003G240000 DUF538 domain containing protein, putative, expressed -
3 Sobic.001G320000 OsSub61 - Putative Subtilisin homologue, expressed -
4 Sobic.003G130400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@embryonic protein DC-8, putative, expressed -
5 Sobic.002G185100 succinate dehydrogenase and fumarate reductase iron-sulfur protein, expressed K00235: SDHB, succinate dehydrogenase (ubiquinone) iron-sulfur subunit
6 Sobic.007G162700 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
7 Sobic.001G375800 expressed protein -
8 Sobic.005G036200 protein of unknown function containing protein, expressed -
9 Sobic.009G233000 homeobox domain containing protein, expressed -
10 Sobic.001G170301 - -
11 Sobic.007G050800 abhydrolase domain-containing protein FAM108C1, putative, expressed -
12 Sobic.010G041900 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@dehydrin, putative, expressed -
13 Sobic.010G133000 late embryogenesis abundant group 1, putative, expressed -
14 Sobic.001G456400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@protein of unknown function DUF1675 domain containing protein, expressed -
15 Sobic.004G092700 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
16 Sobic.002G055800 zinc finger, C3HC4 type domain containing protein, expressed K16277: E3 ubiquitin-protein ligase DRIP
17 Sobic.010G269950 - -
18 Sobic.003G399500 OsFBX59 - F-box domain containing protein, expressed -
19 Sobic.004G148900 ankyrin, putative, expressed -
20 Sobic.006G143600 similar to OSIGBa0157K09-H0214G12.13 protein(PubMedID : 29862293)@caleosin related protein, putative, expressed K17991: peroxygenase


Gene co-expression network
sample Sobic002G051900 Sobic002G051900 Sobic007G199800 Sobic007G199800 Sobic002G051900--Sobic007G199800 Sobic003G240000 Sobic003G240000 Sobic002G051900--Sobic003G240000 Sobic001G320000 Sobic001G320000 Sobic002G051900--Sobic001G320000 Sobic003G130400 Sobic003G130400 Sobic002G051900--Sobic003G130400 Sobic002G185100 Sobic002G185100 Sobic002G051900--Sobic002G185100 Sobic007G162700 Sobic007G162700 Sobic002G051900--Sobic007G162700 Sobic001G375800 Sobic001G375800 Sobic002G051900--Sobic001G375800 Sobic005G036200 Sobic005G036200 Sobic002G051900--Sobic005G036200 Sobic009G233000 Sobic009G233000 Sobic002G051900--Sobic009G233000 Sobic009G060600 Sobic009G060600 Sobic007G199800--Sobic009G060600 Sobic007G050800 Sobic007G050800 Sobic007G199800--Sobic007G050800 Sobic003G236150 Sobic003G236150 Sobic007G199800--Sobic003G236150 Sobic007G199800--Sobic005G036200 Sobic002G367200 Sobic002G367200 Sobic007G199800--Sobic002G367200 Sobic002G055800 Sobic002G055800 Sobic007G199800--Sobic002G055800 Sobic007G192200 Sobic007G192200 Sobic007G199800--Sobic007G192200 Sobic009G002200 Sobic009G002200 Sobic007G199800--Sobic009G002200 Sobic009G012600 Sobic009G012600 Sobic007G199800--Sobic009G012600 Sobic003G240000--Sobic002G051900 Sobic003G240000--Sobic001G320000 Sobic009G222400 Sobic009G222400 Sobic003G240000--Sobic009G222400 Sobic003G102700 Sobic003G102700 Sobic003G240000--Sobic003G102700 Sobic003G247000 Sobic003G247000 Sobic003G240000--Sobic003G247000 Sobic001G170301 Sobic001G170301 Sobic003G240000--Sobic001G170301 Sobic007G097100 Sobic007G097100 Sobic003G240000--Sobic007G097100 Sobic007G023500 Sobic007G023500 Sobic003G240000--Sobic007G023500 Sobic002G168000 Sobic002G168000 Sobic003G240000--Sobic002G168000 Sobic001G320000--Sobic007G097100 Sobic007G160400 Sobic007G160400 Sobic001G320000--Sobic007G160400 Sobic001G493100 Sobic001G493100 Sobic001G320000--Sobic001G493100 Sobic010G214800 Sobic010G214800 Sobic001G320000--Sobic010G214800 Sobic009G031800 Sobic009G031800 Sobic001G320000--Sobic009G031800 Sobic006G226000 Sobic006G226000 Sobic001G320000--Sobic006G226000 Sobic001G320000--Sobic002G055800 Sobic006G135800 Sobic006G135800 Sobic001G320000--Sobic006G135800 Sobic004G142400 Sobic004G142400 Sobic001G320000--Sobic004G142400 Sobic010G041900 Sobic010G041900 Sobic003G130400--Sobic010G041900 Sobic010G133000 Sobic010G133000 Sobic003G130400--Sobic010G133000 Sobic003G399500 Sobic003G399500 Sobic003G130400--Sobic003G399500 Sobic003G130400--Sobic002G185100 Sobic003G130400--Sobic007G162700 Sobic001G126900 Sobic001G126900 Sobic003G130400--Sobic001G126900 Sobic003G144500 Sobic003G144500 Sobic003G130400--Sobic003G144500 Sobic010G007800 Sobic010G007800 Sobic003G130400--Sobic010G007800 Sobic009G104600 Sobic009G104600 Sobic003G130400--Sobic009G104600 Sobic002G185100--Sobic007G162700 Sobic001G497700 Sobic001G497700 Sobic002G185100--Sobic001G497700 Sobic002G185100--Sobic009G104600 Sobic002G185100--Sobic010G007800 Sobic006G143600 Sobic006G143600 Sobic002G185100--Sobic006G143600 Sobic009G104500 Sobic009G104500 Sobic002G185100--Sobic009G104500 Sobic010G269950 Sobic010G269950 Sobic002G185100--Sobic010G269950 Sobic002G185100--Sobic001G126900 Sobic002G185100--Sobic003G130400 Sobic007G162700--Sobic006G143600 Sobic007G162700--Sobic001G126900 Sobic007G162700--Sobic002G185100 Sobic003G283700 Sobic003G283700 Sobic007G162700--Sobic003G283700 Sobic007G162700--Sobic003G399500 Sobic007G162700--Sobic010G269950 Sobic003G295600 Sobic003G295600 Sobic007G162700--Sobic003G295600 Sobic002G391100 Sobic002G391100 Sobic007G162700--Sobic002G391100 Sobic003G098800 Sobic003G098800 Sobic007G162700--Sobic003G098800 Sobic001G375800--Sobic005G036200 Sobic001G456400 Sobic001G456400 Sobic001G375800--Sobic001G456400 Sobic001G375800--Sobic009G002200 Sobic002G420400 Sobic002G420400 Sobic001G375800--Sobic002G420400 Sobic010G033500 Sobic010G033500 Sobic001G375800--Sobic010G033500 Sobic004G242200 Sobic004G242200 Sobic001G375800--Sobic004G242200 Sobic003G379900 Sobic003G379900 Sobic001G375800--Sobic003G379900 Sobic001G485200 Sobic001G485200 Sobic001G375800--Sobic001G485200 Sobic004G339900 Sobic004G339900 Sobic001G375800--Sobic004G339900 Sobic005G036200--Sobic007G192200 Sobic005G036200--Sobic002G420400 Sobic005G036200--Sobic009G002200 Sobic005G036200--Sobic001G375800 Sobic010G054800 Sobic010G054800 Sobic005G036200--Sobic010G054800 Sobic005G036200--Sobic001G456400 Sobic009G250500 Sobic009G250500 Sobic005G036200--Sobic009G250500 Sobic005G036200--Sobic004G242200 Sobic010G131500 Sobic010G131500 Sobic005G036200--Sobic010G131500 Sobic009G233000--Sobic003G295600 Sobic004G301800 Sobic004G301800 Sobic009G233000--Sobic004G301800 Sobic009G233000--Sobic003G283700 Sobic003G236200 Sobic003G236200 Sobic009G233000--Sobic003G236200 Sobic009G233000--Sobic002G391100 Sobic009G233000--Sobic003G098800 Sobic010G142900 Sobic010G142900 Sobic009G233000--Sobic010G142900 Sobic001G380800 Sobic001G380800 Sobic009G233000--Sobic001G380800 Sobic002G118300 Sobic002G118300 Sobic009G233000--Sobic002G118300
Octagon: transcription factors


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