Gene annotation
Transcriptome id Sobic.002G109500.1
Synonym Sb02g009340, DIR1
Functional annotation LTPL42 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt A0A1B6QAH5
Pfam PF14368
Panther DB PTHR33122 PTHR33122:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G48485 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os07g18990.1 : LTPL40 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a045633
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G072000 OsWAK26 - OsWAK receptor-like protein kinase, expressed -
2 Sobic.004G262500 lectin-like protein kinase, putative, expressed -
3 Sobic.010G063900 AP2 domain containing protein, expressed -
4 Sobic.010G192432 - K14431: transcription factor TGA
5 Sobic.010G066800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
6 Sobic.010G192366 - -
7 Sobic.008G158266 - -
8 Sobic.004G039500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed K08237: hydroquinone glucosyltransferase
9 Sobic.003G426500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
10 Sobic.009G130100 CHIT17 - Chitinase family protein precursor, expressed K01183: chitinase
11 Sobic.010G158400 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.001G216500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@nodulin, putative, expressed K07192: flotillin
13 Sobic.008G037900 transcription factor, putative, expressed K14431: transcription factor TGA
14 Sobic.005G230200 GRAS family transcription factor domain containing protein, expressed -
15 Sobic.002G255000 AIR12, putative, expressed -
16 Sobic.003G349400 expressed protein -
17 Sobic.001G067100 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
18 Sobic.002G361200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@sex determination protein tasselseed-2, putative, expressed -
19 Sobic.007G100700 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
20 Sobic.006G274933 - -


Gene co-expression network
sample Sobic002G109500 Sobic002G109500 Sobic006G072000 Sobic006G072000 Sobic002G109500--Sobic006G072000 Sobic004G262500 Sobic004G262500 Sobic002G109500--Sobic004G262500 Sobic010G063900 Sobic010G063900 Sobic002G109500--Sobic010G063900 Sobic010G192432 Sobic010G192432 Sobic002G109500--Sobic010G192432 Sobic010G066800 Sobic010G066800 Sobic002G109500--Sobic010G066800 Sobic010G192366 Sobic010G192366 Sobic002G109500--Sobic010G192366 Sobic008G158266 Sobic008G158266 Sobic002G109500--Sobic008G158266 Sobic004G039500 Sobic004G039500 Sobic002G109500--Sobic004G039500 Sobic003G426500 Sobic003G426500 Sobic002G109500--Sobic003G426500 Sobic007G008600 Sobic007G008600 Sobic006G072000--Sobic007G008600 Sobic002G255000 Sobic002G255000 Sobic006G072000--Sobic002G255000 Sobic005G127400 Sobic005G127400 Sobic006G072000--Sobic005G127400 Sobic006G072000--Sobic003G426500 Sobic003G064800 Sobic003G064800 Sobic006G072000--Sobic003G064800 Sobic003G215200 Sobic003G215200 Sobic006G072000--Sobic003G215200 Sobic003G349400 Sobic003G349400 Sobic006G072000--Sobic003G349400 Sobic001G438200 Sobic001G438200 Sobic006G072000--Sobic001G438200 Sobic003G182200 Sobic003G182200 Sobic006G072000--Sobic003G182200 Sobic009G130100 Sobic009G130100 Sobic004G262500--Sobic009G130100 Sobic006G274933 Sobic006G274933 Sobic004G262500--Sobic006G274933 Sobic003G404600 Sobic003G404600 Sobic004G262500--Sobic003G404600 Sobic003G417100 Sobic003G417100 Sobic004G262500--Sobic003G417100 Sobic006G256900 Sobic006G256900 Sobic004G262500--Sobic006G256900 Sobic009G219200 Sobic009G219200 Sobic004G262500--Sobic009G219200 Sobic004G024100 Sobic004G024100 Sobic004G262500--Sobic004G024100 Sobic004G042000 Sobic004G042000 Sobic004G262500--Sobic004G042000 Sobic006G197100 Sobic006G197100 Sobic004G262500--Sobic006G197100 Sobic002G085800 Sobic002G085800 Sobic010G063900--Sobic002G085800 Sobic009G098000 Sobic009G098000 Sobic010G063900--Sobic009G098000 Sobic003G176300 Sobic003G176300 Sobic010G063900--Sobic003G176300 Sobic010G063900--Sobic010G066800 Sobic010G241800 Sobic010G241800 Sobic010G063900--Sobic010G241800 Sobic010G063900--Sobic003G426500 Sobic002G068000 Sobic002G068000 Sobic010G063900--Sobic002G068000 Sobic005G216700 Sobic005G216700 Sobic010G063900--Sobic005G216700 Sobic010G063900--Sobic003G182200 Sobic010G192432--Sobic010G192366 Sobic004G078800 Sobic004G078800 Sobic010G192432--Sobic004G078800 Sobic003G227700 Sobic003G227700 Sobic010G192432--Sobic003G227700 Sobic001G483600 Sobic001G483600 Sobic010G192432--Sobic001G483600 Sobic001G067100 Sobic001G067100 Sobic010G192432--Sobic001G067100 Sobic006G135300 Sobic006G135300 Sobic010G192432--Sobic006G135300 Sobic010G097200 Sobic010G097200 Sobic010G192432--Sobic010G097200 Sobic010G071400 Sobic010G071400 Sobic010G192432--Sobic010G071400 Sobic007G100700 Sobic007G100700 Sobic010G192432--Sobic007G100700 Sobic010G066800--Sobic007G100700 Sobic010G066800--Sobic003G426500 Sobic010G066800--Sobic003G349400 Sobic010G066800--Sobic002G068000 Sobic010G066800--Sobic003G182200 Sobic010G066800--Sobic007G008600 Sobic009G032900 Sobic009G032900 Sobic010G066800--Sobic009G032900 Sobic008G011700 Sobic008G011700 Sobic010G066800--Sobic008G011700 Sobic010G066800--Sobic002G255000 Sobic010G192366--Sobic010G192432 Sobic010G192366--Sobic010G097200 Sobic010G192366--Sobic001G483600 Sobic004G119800 Sobic004G119800 Sobic010G192366--Sobic004G119800 Sobic008G037900 Sobic008G037900 Sobic010G192366--Sobic008G037900 Sobic006G196400 Sobic006G196400 Sobic010G192366--Sobic006G196400 Sobic005G080600 Sobic005G080600 Sobic010G192366--Sobic005G080600 Sobic010G192366--Sobic006G135300 Sobic010G192366--Sobic007G100700 Sobic004G323000 Sobic004G323000 Sobic008G158266--Sobic004G323000 Sobic010G139100 Sobic010G139100 Sobic008G158266--Sobic010G139100 Sobic006G135500 Sobic006G135500 Sobic008G158266--Sobic006G135500 Sobic002G122400 Sobic002G122400 Sobic008G158266--Sobic002G122400 Sobic005G161200 Sobic005G161200 Sobic008G158266--Sobic005G161200 Sobic001G314100 Sobic001G314100 Sobic008G158266--Sobic001G314100 Sobic010G174100 Sobic010G174100 Sobic008G158266--Sobic010G174100 Sobic010G006200 Sobic010G006200 Sobic008G158266--Sobic010G006200 Sobic008G158266--Sobic009G032900 Sobic005G049600 Sobic005G049600 Sobic004G039500--Sobic005G049600 Sobic005G044500 Sobic005G044500 Sobic004G039500--Sobic005G044500 Sobic009G026200 Sobic009G026200 Sobic004G039500--Sobic009G026200 Sobic001G069800 Sobic001G069800 Sobic004G039500--Sobic001G069800 Sobic004G039500--Sobic002G109500 Sobic001G195000 Sobic001G195000 Sobic004G039500--Sobic001G195000 Sobic002G124700 Sobic002G124700 Sobic004G039500--Sobic002G124700 Sobic003G424950 Sobic003G424950 Sobic004G039500--Sobic003G424950 Sobic004G006700 Sobic004G006700 Sobic004G039500--Sobic004G006700 Sobic003G426500--Sobic007G100700 Sobic003G426500--Sobic003G182200 Sobic003G426500--Sobic008G011700 Sobic003G426500--Sobic010G066800 Sobic003G426500--Sobic001G067100 Sobic003G426500--Sobic002G068000 Sobic009G259800 Sobic009G259800 Sobic003G426500--Sobic009G259800 Sobic010G158400 Sobic010G158400 Sobic003G426500--Sobic010G158400 Sobic003G426500--Sobic003G349400
Octagon: transcription factors


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