Gene annotation
| Transcriptome id | Sobic.004G039500.1 |
|---|---|
| Synonym | Sb04g003400, GT72B1, UGT72B1 |
| Functional annotation | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543) UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed |
| UniProt | C5XUM3 |
| Pfam | PF00201 |
| Panther DB | PTHR11926 PTHR11926:SF381 |
| NCBI CDD | - |
| KEGG Orthology | K08237; hydroquinone glucosyltransferase |
| Gene Ontology | GO:0016758; transferase activity, transferring hexosyl groups GO:0008152metabolic process |
Orthologs (automatic annotation)
| TAIR | AT4G01070 : UDP-Glycosyltransferase superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os11g38650.1 : UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a029458 , Zm00025a034708 , Zm00025a046826 |
| Brachypodium | KQK05281 , KQK18635 , KQJ89863 , PNT70855 , KQK09613 , KQK09339 |
| Barley | HORVU7Hr1G042890.1 , HORVU7Hr1G042890.2 , HORVU5Hr1G095010.2 , HORVU5Hr1G095010.1 , HORVU7Hr1G114890.1 , HORVU6Hr1G020960.1 , HORVU6Hr1G020960.3 , HORVU1Hr1G081920.5 , HORVU7Hr1G042910.1 , HORVU7Hr1G065180.5 , HORVU7Hr1G065180.4 , HORVU7Hr1G065180.6 , HORVU7Hr1G065180.1 , HORVU7Hr1G065180.3 , HORVU7Hr1G065180.2 , HORVU7Hr1G042890.4 , HORVU7Hr1G042890.3 , HORVU3Hr1G004850.2 , HORVU3Hr1G004850.3 , HORVU3Hr1G004850.1 , HORVU3Hr1G004850.4 |
| Wheat | TraesCS5A02G387900 , TraesCS5A02G387900 , TraesCS7B02G428300 , TraesCS7A02G514300 , TraesCS7A02G002600 , TraesCS3A02G010300 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.005G049600 | OsWAK46 - OsWAK receptor-like protein kinase, expressed | - |
| 2 | Sobic.005G044500 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein | - |
| 3 | Sobic.009G026200 | IQ calmodulin-binding motif domain containing protein, expressed | - |
| 4 | Sobic.001G069800 | tubulin/FtsZ domain containing protein, putative, expressed | K07375: tubulin beta |
| 5 | Sobic.002G109500 | LTPL42 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 6 | Sobic.001G195000 | protein kinase domain containing protein, expressed | K04730: interleukin-1 receptor-associated kinase 1 |
| 7 | Sobic.002G124700 | up-regulated by silicon application(PubMedID : 24879770)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed | K09872: aquaporin PIP |
| 8 | Sobic.003G424950 | - | K14508: regulatory protein NPR1 |
| 9 | Sobic.004G006700 | tetratricopeptide repeat domain containing protein, expressed | - |
| 10 | Sobic.004G054200 | avr9/Cf-9 rapidly elicited protein 137, putative, expressed | - |
| 11 | Sobic.004G134100 | glycosyltransferase, putative, expressed | - |
| 12 | Sobic.003G305601 | - | - |
| 13 | Sobic.003G115200 | expressed protein | - |
| 14 | Sobic.006G100501 | - | - |
| 15 | Sobic.004G288700 | similar to Aquaporin PIP1-3/PIP1-4(PubMedID : 29862293)@up-regulated by silicon application(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed | K09872: aquaporin PIP |
| 16 | Sobic.004G247300 | cysteine-rich repeat secretory protein precursor, putative, expressed | - |
| 17 | Sobic.010G279000 | expressed protein | - |
| 18 | Sobic.001G090000 | expressed protein | - |
| 19 | Sobic.003G300600 | Up-reguralion under heat(PubMedID : 24916767)@potassium channel KAT1, putative, expressed | - |
| 20 | Sobic.002G225200 | expressed protein | - |
Gene co-expression network
Octagon: transcription factors
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