Gene annotation
Transcriptome id Sobic.003G300600.1
Synonym KAT1, Sb03g034980
Functional annotation Up-reguralion under heat (PubMedID : 24916767)
potassium channel KAT1, putative, expressed
UniProt C5XK80
Pfam PF07885 PF00027
Panther DB PTHR10217 PTHR10217:SF520
NCBI CDD KOG0500; Cyclic nucleotide-gated cation channel CNGA1-3 and related proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G46240 : potassium channel in Arabidopsis thaliana 1
RAP-DB (Rice) LOC_Os01g55200.1 : potassium channel KAT1, putative, expressed
MaizeGDB (Corn) Zm00025a037335 , Zm00025a040023 , Zm00025a040022 , Zm00025a043762 , Zm00025a045137
Brachypodium PNT72879 , PNT72880
Barley HORVU2Hr1G083820.8 , HORVU3Hr1G072850.1 , HORVU3Hr1G072850.16 , HORVU3Hr1G072850.15 , HORVU3Hr1G072850.14 , HORVU3Hr1G072850.13 , HORVU3Hr1G072850.12 , HORVU3Hr1G072850.11 , HORVU3Hr1G072850.10 , HORVU3Hr1G072850.9 , HORVU3Hr1G072850.8 , HORVU3Hr1G072850.7 , HORVU3Hr1G072850.6 , HORVU3Hr1G072850.5 , HORVU3Hr1G072850.4 , HORVU1Hr1G065250.13 , HORVU1Hr1G065250.12 , HORVU1Hr1G065250.11 , HORVU1Hr1G065250.10 , HORVU2Hr1G083820.7 , HORVU2Hr1G083820.6 , HORVU2Hr1G083820.5 , HORVU2Hr1G083820.4 , HORVU2Hr1G083820.3 , HORVU2Hr1G083820.2 , HORVU2Hr1G083820.1 , HORVU2Hr1G083820.9 , HORVU2Hr1G083820.11 , HORVU2Hr1G083820.10 , HORVU1Hr1G065250.3 , HORVU1Hr1G065250.2 , HORVU1Hr1G065250.7 , HORVU1Hr1G065250.6 , HORVU1Hr1G065250.5 , HORVU1Hr1G065250.4 , HORVU1Hr1G065250.1 , HORVU1Hr1G065250.9 , HORVU1Hr1G065250.8 , HORVU3Hr1G072850.3 , HORVU3Hr1G072850.2
Wheat TraesCS1A02G267900 , TraesCS1A02G267900 , TraesCS1A02G267900 , TraesCS1D02G267800 , TraesCS1D02G267800 , TraesCSU02G182900 , TraesCS3B02G328800 , TraesCS2A02G321100 , TraesCS3A02G294200 , TraesCS3D02G294000
Populus -


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cDNA sequences
Sobic.003G300600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G242100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyltransferase family 43 protein, putative, expressed -
2 Sobic.001G294400 CAMK_CAMK_like.41 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
3 Sobic.003G270300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.004G172100 serine/threonine-protein kinase, putative, expressed -
5 Sobic.007G137300 myb-like DNA-binding domain containing protein, expressed -
6 Sobic.005G049600 OsWAK46 - OsWAK receptor-like protein kinase, expressed -
7 Sobic.006G149300 possible lysine decarboxylase domain containing protein, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
8 Sobic.008G141200 DUF1336 domain containing protein, expressed -
9 Sobic.003G132500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@subtilisin-like protease, putative, expressed -
10 Sobic.005G010300 expressed protein -
11 Sobic.010G170400 "CYP711A family, the cytochrome P450 homepage. Its recombinant protein did not converted CLA to 5DS or 5DS to hydroxylated 5DS."(PubMedID : 33793911)@Synthesized carlactonoic acid (CLA) from carlactone (CL).(PubMedID : 34970291)@cytochrome P450, putative, expressed -
12 Sobic.003G198400 - -
13 Sobic.001G157400 Class III HD ZIP family protein(PubMedID : 23915383)@START domain containing protein, expressed K09338: homeobox-leucine zipper protein
14 Sobic.003G105500 transferase family protein, putative, expressed -
15 Sobic.007G009500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@TKL_IRAK_CR4L.6 - The CR4L subfamily has homology with Crinkly4, expressed -
16 Sobic.004G257800 chloride transporter, chloride channel family, putative, expressed -
17 Sobic.001G113700 cytochrome b561, putative, expressed K08360: cytochrome b-561
18 Sobic.005G110490 - -
19 Sobic.001G305300 ATROPGEF7/ROPGEF7, putative, expressed -
20 Sobic.009G188100 serine/threonine-protein kinase receptor precursor, putative, expressed -


Gene co-expression network
sample Sobic003G300600 Sobic003G300600 Sobic006G242100 Sobic006G242100 Sobic003G300600--Sobic006G242100 Sobic001G294400 Sobic001G294400 Sobic003G300600--Sobic001G294400 Sobic003G270300 Sobic003G270300 Sobic003G300600--Sobic003G270300 Sobic004G172100 Sobic004G172100 Sobic003G300600--Sobic004G172100 Sobic007G137300 Sobic007G137300 Sobic003G300600--Sobic007G137300 Sobic005G049600 Sobic005G049600 Sobic003G300600--Sobic005G049600 Sobic006G149300 Sobic006G149300 Sobic003G300600--Sobic006G149300 Sobic008G141200 Sobic008G141200 Sobic003G300600--Sobic008G141200 Sobic003G132500 Sobic003G132500 Sobic003G300600--Sobic003G132500 Sobic006G242100--Sobic004G172100 Sobic006G242100--Sobic001G294400 Sobic003G095400 Sobic003G095400 Sobic006G242100--Sobic003G095400 Sobic002G372800 Sobic002G372800 Sobic006G242100--Sobic002G372800 Sobic003G353400 Sobic003G353400 Sobic006G242100--Sobic003G353400 Sobic004G111100 Sobic004G111100 Sobic006G242100--Sobic004G111100 Sobic001G038200 Sobic001G038200 Sobic006G242100--Sobic001G038200 Sobic009G194200 Sobic009G194200 Sobic006G242100--Sobic009G194200 Sobic009G220200 Sobic009G220200 Sobic006G242100--Sobic009G220200 Sobic001G294400--Sobic006G242100 Sobic004G212300 Sobic004G212300 Sobic001G294400--Sobic004G212300 Sobic010G069900 Sobic010G069900 Sobic001G294400--Sobic010G069900 Sobic001G084100 Sobic001G084100 Sobic001G294400--Sobic001G084100 Sobic010G071400 Sobic010G071400 Sobic001G294400--Sobic010G071400 Sobic010G052200 Sobic010G052200 Sobic001G294400--Sobic010G052200 Sobic001G294400--Sobic004G172100 Sobic005G142300 Sobic005G142300 Sobic001G294400--Sobic005G142300 Sobic009G102600 Sobic009G102600 Sobic001G294400--Sobic009G102600 Sobic001G526200 Sobic001G526200 Sobic003G270300--Sobic001G526200 Sobic001G217000 Sobic001G217000 Sobic003G270300--Sobic001G217000 Sobic001G113700 Sobic001G113700 Sobic003G270300--Sobic001G113700 Sobic002G210300 Sobic002G210300 Sobic003G270300--Sobic002G210300 Sobic003G373000 Sobic003G373000 Sobic003G270300--Sobic003G373000 Sobic003G270300--Sobic006G242100 Sobic001G209800 Sobic001G209800 Sobic003G270300--Sobic001G209800 Sobic001G513700 Sobic001G513700 Sobic003G270300--Sobic001G513700 Sobic003G012800 Sobic003G012800 Sobic003G270300--Sobic003G012800 Sobic004G172100--Sobic006G242100 Sobic004G172100--Sobic003G095400 Sobic009G030200 Sobic009G030200 Sobic004G172100--Sobic009G030200 Sobic006G087900 Sobic006G087900 Sobic004G172100--Sobic006G087900 Sobic004G172100--Sobic009G102600 Sobic003G278700 Sobic003G278700 Sobic004G172100--Sobic003G278700 Sobic009G099000 Sobic009G099000 Sobic004G172100--Sobic009G099000 Sobic004G257800 Sobic004G257800 Sobic004G172100--Sobic004G257800 Sobic004G172100--Sobic001G294400 Sobic007G137300--Sobic004G172100 Sobic001G108350 Sobic001G108350 Sobic007G137300--Sobic001G108350 Sobic006G191100 Sobic006G191100 Sobic007G137300--Sobic006G191100 Sobic007G137300--Sobic006G087900 Sobic007G137300--Sobic002G372800 Sobic007G137300--Sobic001G294400 Sobic007G137300--Sobic006G242100 Sobic007G009500 Sobic007G009500 Sobic007G137300--Sobic007G009500 Sobic002G325900 Sobic002G325900 Sobic007G137300--Sobic002G325900 Sobic003G198500 Sobic003G198500 Sobic005G049600--Sobic003G198500 Sobic005G092000 Sobic005G092000 Sobic005G049600--Sobic005G092000 Sobic006G156100 Sobic006G156100 Sobic005G049600--Sobic006G156100 Sobic005G195600 Sobic005G195600 Sobic005G049600--Sobic005G195600 Sobic005G049600--Sobic003G278700 Sobic004G039500 Sobic004G039500 Sobic005G049600--Sobic004G039500 Sobic004G337900 Sobic004G337900 Sobic005G049600--Sobic004G337900 Sobic005G049600--Sobic006G191100 Sobic005G049600--Sobic004G172100 Sobic002G016400 Sobic002G016400 Sobic006G149300--Sobic002G016400 Sobic007G208100 Sobic007G208100 Sobic006G149300--Sobic007G208100 Sobic010G104400 Sobic010G104400 Sobic006G149300--Sobic010G104400 Sobic005G231300 Sobic005G231300 Sobic006G149300--Sobic005G231300 Sobic005G098400 Sobic005G098400 Sobic006G149300--Sobic005G098400 Sobic002G226500 Sobic002G226500 Sobic006G149300--Sobic002G226500 Sobic002G278200 Sobic002G278200 Sobic006G149300--Sobic002G278200 Sobic007G120301 Sobic007G120301 Sobic006G149300--Sobic007G120301 Sobic007G018100 Sobic007G018100 Sobic006G149300--Sobic007G018100 Sobic003G135400 Sobic003G135400 Sobic008G141200--Sobic003G135400 Sobic009G206500 Sobic009G206500 Sobic008G141200--Sobic009G206500 Sobic003G420100 Sobic003G420100 Sobic008G141200--Sobic003G420100 Sobic009G059500 Sobic009G059500 Sobic008G141200--Sobic009G059500 Sobic003G247600 Sobic003G247600 Sobic008G141200--Sobic003G247600 Sobic010G131400 Sobic010G131400 Sobic008G141200--Sobic010G131400 Sobic009G189200 Sobic009G189200 Sobic008G141200--Sobic009G189200 Sobic009G214100 Sobic009G214100 Sobic008G141200--Sobic009G214100 Sobic004G066900 Sobic004G066900 Sobic008G141200--Sobic004G066900 Sobic003G132500--Sobic006G149300 Sobic003G132500--Sobic002G016400 Sobic003G132500--Sobic005G231300 Sobic002G034301 Sobic002G034301 Sobic003G132500--Sobic002G034301 Sobic003G052100 Sobic003G052100 Sobic003G132500--Sobic003G052100 Sobic010G042600 Sobic010G042600 Sobic003G132500--Sobic010G042600 Sobic003G132500--Sobic007G208100 Sobic003G132500--Sobic007G120301 Sobic001G144200 Sobic001G144200 Sobic003G132500--Sobic001G144200
Octagon: transcription factors


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