Gene annotation
Transcriptome id Sobic.003G270300.1
Synonym ATMYB86, Sb03g032260, MYB86
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
MYB family transcription factor, putative, expressed
UniProt C5XHL0
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF597
NCBI CDD -
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G26660 : myb domain protein 86
RAP-DB (Rice) LOC_Os01g50720.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a056586 , Zm00025a020983 , Zm00025a009981 , Zm00025a044427 , Zm00025a038916 , Zm00025a026626 , Zm00025a027885 , Zm00025a032132 , Zm00025a037328 , Zm00025a033716 , Zm00025a029124 , Zm00025a036493 , Zm00025a004957 , Zm00025a043868 , Zm00025a010442 , Zm00025a025715 , Zm00025a023288 , Zm00025a056908
Brachypodium PNT69079 , KQK05100 , KQK09372 , KQK18925 , KQK18924 , KQK00366 , KQJ83761 , KQK10836 , KQK01840 , KQK08236
Barley HORVU6Hr1G067380.1 , HORVU6Hr1G067380.2 , HORVU6Hr1G067380.3 , HORVU1Hr1G078950.2 , HORVU1Hr1G078950.1 , HORVU7Hr1G072450.2 , HORVU2Hr1G106140.1 , HORVU2Hr1G106140.2 , HORVU2Hr1G106140.3 , HORVU7Hr1G072450.3 , HORVU3Hr1G047290.2 , HORVU6Hr1G057670.3 , HORVU6Hr1G057670.1 , HORVU1Hr1G079030.2 , HORVU1Hr1G079030.3 , HORVU1Hr1G079030.1 , HORVU1Hr1G079030.6 , HORVU1Hr1G079030.4 , HORVU1Hr1G079030.5 , HORVU3Hr1G082210.8 , HORVU3Hr1G082210.2 , HORVU3Hr1G082210.3 , HORVU3Hr1G082210.1 , HORVU3Hr1G082210.6 , HORVU3Hr1G082210.7 , HORVU3Hr1G082210.4 , HORVU3Hr1G082210.5 , HORVU6Hr1G060650.6 , HORVU6Hr1G060650.5 , HORVU6Hr1G060650.4 , HORVU6Hr1G060650.3 , HORVU6Hr1G060650.2 , HORVU6Hr1G060650.1 , HORVU6Hr1G078300.1 , HORVU6Hr1G078300.2 , HORVU6Hr1G078300.3 , HORVU7Hr1G037060.3 , HORVU7Hr1G037060.4 , HORVU1Hr1G078940.2 , HORVU1Hr1G079040.6 , HORVU1Hr1G079040.5 , HORVU1Hr1G079040.4 , HORVU1Hr1G079040.3 , HORVU1Hr1G079040.2 , HORVU1Hr1G079040.1 , HORVU2Hr1G091630.3 , HORVU2Hr1G091630.2 , HORVU3Hr1G047290.4 , HORVU3Hr1G047290.3 , HORVU1Hr1G078940.1
Wheat TraesCS1D02G371900 , TraesCS1A02G365900 , TraesCS2D02G446100 , TraesCS6B02G349200 , TraesCS1B02G384000 , TraesCS3D02G255400 , TraesCS6D02G207300 , TraesCS2D02G446500 , TraesCS3A02G254500 , TraesCS3A02G254500 , TraesCS1D02G371800 , TraesCS1D02G371700 , TraesCS1A02G268800 , TraesCS6D02G298100 , TraesCS6D02G298100 , TraesCS2A02G447500 , TraesCS6B02G292500 , TraesCS6D02G249200 , TraesCS1D02G371600 , TraesCS2D02G446400 , TraesCS6A02G265300 , TraesCS1A02G366000 , TraesCS2A02G447600 , TraesCS2B02G387000 , TraesCS3B02G286500 , TraesCS1A02G366200 , TraesCS7D02G181400 , TraesCS2B02G468000 , TraesCS1D02G371400 , TraesCS2A02G447300 , TraesCS6B02G349100 , TraesCS3A02G384400 , TraesCS1B02G383700 , TraesCS6B02G254200 , TraesCS2A02G447400 , TraesCS1A02G366100 , TraesCS6D02G219500 , TraesCS6B02G265400 , TraesCS6A02G227700 , TraesCS1B02G383800 , TraesCS3D02G377300 , TraesCS2D02G366400 , TraesCS1B02G383900 , TraesCS6A02G318900 , TraesCS6A02G236900 , TraesCS7A02G179900 , TraesCS2A02G370000 , TraesCS7D02G300000 , TraesCS7D02G300000 , TraesCS1B02G383600 , TraesCS7B02G085100 , TraesCS1A02G366300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G526200 homeobox protein knotted-1, putative, expressed -
2 Sobic.001G217000 DUF584 domain containing protein, putative, expressed -
3 Sobic.001G113700 cytochrome b561, putative, expressed K08360: cytochrome b-561
4 Sobic.002G210300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@hypro1, putative, expressed -
5 Sobic.003G373000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
6 Sobic.006G242100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyltransferase family 43 protein, putative, expressed -
7 Sobic.001G209800 harpin-induced protein 1 domain containing protein, expressed -
8 Sobic.001G513700 down-regulated TF in developmental senescence(PubMedID : 27586543)@BHLH transcription factor, putative, expressed -
9 Sobic.003G012800 AP2 domain containing protein, expressed -
10 Sobic.010G238800 glycosyltransferase family 43 protein, putative, expressed -
11 Sobic.001G429900 phospholipase A2, putative, expressed -
12 Sobic.009G220200 exostosin family domain containing protein, expressed -
13 Sobic.001G077400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
14 Sobic.003G338900 expressed protein -
15 Sobic.001G051800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsFBDUF18 - F-box and DUF domain containing protein, expressed -
16 Sobic.010G076600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Serine/threonine-protein kinase RIPK(PubMedID : 31721651)@tyrosine protein kinase domain containing protein, putative, expressed -
17 Sobic.001G084100 UDP-glucose 6-dehydrogenase 5(PubMedID : 26186930)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
18 Sobic.006G026700 expressed protein -
19 Sobic.003G323100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.001G197400 actin, putative, expressed K10355: actin, other eukaryote


Gene co-expression network
sample Sobic003G270300 Sobic003G270300 Sobic001G526200 Sobic001G526200 Sobic003G270300--Sobic001G526200 Sobic001G217000 Sobic001G217000 Sobic003G270300--Sobic001G217000 Sobic001G113700 Sobic001G113700 Sobic003G270300--Sobic001G113700 Sobic002G210300 Sobic002G210300 Sobic003G270300--Sobic002G210300 Sobic003G373000 Sobic003G373000 Sobic003G270300--Sobic003G373000 Sobic006G242100 Sobic006G242100 Sobic003G270300--Sobic006G242100 Sobic001G209800 Sobic001G209800 Sobic003G270300--Sobic001G209800 Sobic001G513700 Sobic001G513700 Sobic003G270300--Sobic001G513700 Sobic003G012800 Sobic003G012800 Sobic003G270300--Sobic003G012800 Sobic003G108200 Sobic003G108200 Sobic001G526200--Sobic003G108200 Sobic001G526200--Sobic003G270300 Sobic001G526200--Sobic002G210300 Sobic010G200700 Sobic010G200700 Sobic001G526200--Sobic010G200700 Sobic001G526200--Sobic003G373000 Sobic001G429900 Sobic001G429900 Sobic001G526200--Sobic001G429900 Sobic001G526200--Sobic001G217000 Sobic010G238800 Sobic010G238800 Sobic001G526200--Sobic010G238800 Sobic001G526200--Sobic003G012800 Sobic001G473900 Sobic001G473900 Sobic001G217000--Sobic001G473900 Sobic001G217000--Sobic001G113700 Sobic002G379400 Sobic002G379400 Sobic001G217000--Sobic002G379400 Sobic010G076600 Sobic010G076600 Sobic001G217000--Sobic010G076600 Sobic003G338900 Sobic003G338900 Sobic001G217000--Sobic003G338900 Sobic001G217000--Sobic002G210300 Sobic009G208800 Sobic009G208800 Sobic001G217000--Sobic009G208800 Sobic004G257300 Sobic004G257300 Sobic001G217000--Sobic004G257300 Sobic009G220200 Sobic009G220200 Sobic001G217000--Sobic009G220200 Sobic001G113700--Sobic009G220200 Sobic001G113700--Sobic001G217000 Sobic001G051800 Sobic001G051800 Sobic001G113700--Sobic001G051800 Sobic001G113700--Sobic002G210300 Sobic001G113700--Sobic003G338900 Sobic001G113700--Sobic009G208800 Sobic005G231700 Sobic005G231700 Sobic001G113700--Sobic005G231700 Sobic001G113700--Sobic002G379400 Sobic003G296700 Sobic003G296700 Sobic001G113700--Sobic003G296700 Sobic009G027900 Sobic009G027900 Sobic002G210300--Sobic009G027900 Sobic002G210300--Sobic003G338900 Sobic002G210300--Sobic001G217000 Sobic002G210300--Sobic003G012800 Sobic002G210300--Sobic009G220200 Sobic002G210300--Sobic001G051800 Sobic003G339100 Sobic003G339100 Sobic002G210300--Sobic003G339100 Sobic002G272900 Sobic002G272900 Sobic002G210300--Sobic002G272900 Sobic002G210300--Sobic001G113700 Sobic003G373000--Sobic010G200700 Sobic003G373000--Sobic003G012800 Sobic002G036100 Sobic002G036100 Sobic003G373000--Sobic002G036100 Sobic004G286600 Sobic004G286600 Sobic003G373000--Sobic004G286600 Sobic010G245800 Sobic010G245800 Sobic003G373000--Sobic010G245800 Sobic006G089300 Sobic006G089300 Sobic003G373000--Sobic006G089300 Sobic009G066800 Sobic009G066800 Sobic003G373000--Sobic009G066800 Sobic003G373000--Sobic001G513700 Sobic001G077400 Sobic001G077400 Sobic003G373000--Sobic001G077400 Sobic004G172100 Sobic004G172100 Sobic006G242100--Sobic004G172100 Sobic001G294400 Sobic001G294400 Sobic006G242100--Sobic001G294400 Sobic003G095400 Sobic003G095400 Sobic006G242100--Sobic003G095400 Sobic002G372800 Sobic002G372800 Sobic006G242100--Sobic002G372800 Sobic003G353400 Sobic003G353400 Sobic006G242100--Sobic003G353400 Sobic004G111100 Sobic004G111100 Sobic006G242100--Sobic004G111100 Sobic001G038200 Sobic001G038200 Sobic006G242100--Sobic001G038200 Sobic009G194200 Sobic009G194200 Sobic006G242100--Sobic009G194200 Sobic006G242100--Sobic009G220200 Sobic001G209800--Sobic001G077400 Sobic004G280900 Sobic004G280900 Sobic001G209800--Sobic004G280900 Sobic009G217600 Sobic009G217600 Sobic001G209800--Sobic009G217600 Sobic001G035000 Sobic001G035000 Sobic001G209800--Sobic001G035000 Sobic005G037000 Sobic005G037000 Sobic001G209800--Sobic005G037000 Sobic001G441100 Sobic001G441100 Sobic001G209800--Sobic001G441100 Sobic001G209800--Sobic010G076600 Sobic001G341600 Sobic001G341600 Sobic001G209800--Sobic001G341600 Sobic006G274300 Sobic006G274300 Sobic001G209800--Sobic006G274300 Sobic008G177800 Sobic008G177800 Sobic001G513700--Sobic008G177800 Sobic007G151100 Sobic007G151100 Sobic001G513700--Sobic007G151100 Sobic001G513700--Sobic002G036100 Sobic001G516600 Sobic001G516600 Sobic001G513700--Sobic001G516600 Sobic001G532200 Sobic001G532200 Sobic001G513700--Sobic001G532200 Sobic006G231100 Sobic006G231100 Sobic001G513700--Sobic006G231100 Sobic002G294700 Sobic002G294700 Sobic001G513700--Sobic002G294700 Sobic007G057100 Sobic007G057100 Sobic001G513700--Sobic007G057100 Sobic001G513700--Sobic006G089300 Sobic003G012800--Sobic010G200700 Sobic003G268700 Sobic003G268700 Sobic003G012800--Sobic003G268700 Sobic003G012800--Sobic003G373000 Sobic003G012800--Sobic006G089300 Sobic006G228300 Sobic006G228300 Sobic003G012800--Sobic006G228300 Sobic003G012800--Sobic001G209800 Sobic003G012800--Sobic001G077400 Sobic003G012800--Sobic009G217600 Sobic003G012800--Sobic002G036100
Octagon: transcription factors


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