Gene annotation
Transcriptome id Sobic.005G044500.1
Synonym Sb05g003670
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
expressed protein
UniProt C5Y542
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g06280.1 : expressed protein
MaizeGDB (Corn) Zm00025a033685 , Zm00025a053955 , Zm00025a012950
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G115200 expressed protein -
2 Sobic.008G129300 CPuORF5 - conserved peptide uORF-containing transcript, expressed -
3 Sobic.003G321400 plastocyanin-like domain containing protein, putative, expressed -
4 Sobic.003G269100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AWPM-19-like membrane family protein, putative, expressed -
5 Sobic.001G230100 3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed K07513: acetyl-CoA acyltransferase 1
6 Sobic.002G034301 - -
7 Sobic.004G134100 glycosyltransferase, putative, expressed -
8 Sobic.004G297950 - -
9 Sobic.004G006700 tetratricopeptide repeat domain containing protein, expressed -
10 Sobic.009G026200 IQ calmodulin-binding motif domain containing protein, expressed -
11 Sobic.001G099600 ankyrin repeat family protein, putative, expressed -
12 Sobic.001G264400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -
13 Sobic.001G512000 cyclin-dependent kinase inhibitor, putative, expressed -
14 Sobic.007G157900 gibberellin receptor GID1L2, putative, expressed -
15 Sobic.005G130600 expressed protein -
16 Sobic.003G198500 XIK, putative, expressed K10357: myosin V
17 Sobic.003G000200 AWPM-19-like membrane family protein, putative, expressed -
18 Sobic.005G110600 glycosyl hydrolase, putative, expressed K01183: chitinase
19 Sobic.009G238900 dehydrogenase, putative, expressed K00031: IDH1, IDH2, isocitrate dehydrogenase
20 Sobic.005G052500 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)


Gene co-expression network
sample Sobic005G044500 Sobic005G044500 Sobic003G115200 Sobic003G115200 Sobic005G044500--Sobic003G115200 Sobic008G129300 Sobic008G129300 Sobic005G044500--Sobic008G129300 Sobic003G321400 Sobic003G321400 Sobic005G044500--Sobic003G321400 Sobic003G269100 Sobic003G269100 Sobic005G044500--Sobic003G269100 Sobic001G230100 Sobic001G230100 Sobic005G044500--Sobic001G230100 Sobic002G034301 Sobic002G034301 Sobic005G044500--Sobic002G034301 Sobic004G134100 Sobic004G134100 Sobic005G044500--Sobic004G134100 Sobic004G297950 Sobic004G297950 Sobic005G044500--Sobic004G297950 Sobic004G006700 Sobic004G006700 Sobic005G044500--Sobic004G006700 Sobic003G115200--Sobic003G321400 Sobic003G000200 Sobic003G000200 Sobic003G115200--Sobic003G000200 Sobic003G115200--Sobic003G269100 Sobic001G261460 Sobic001G261460 Sobic003G115200--Sobic001G261460 Sobic010G047600 Sobic010G047600 Sobic003G115200--Sobic010G047600 Sobic009G221800 Sobic009G221800 Sobic003G115200--Sobic009G221800 Sobic010G014400 Sobic010G014400 Sobic003G115200--Sobic010G014400 Sobic009G130300 Sobic009G130300 Sobic003G115200--Sobic009G130300 Sobic001G514200 Sobic001G514200 Sobic003G115200--Sobic001G514200 Sobic001G281900 Sobic001G281900 Sobic008G129300--Sobic001G281900 Sobic003G330500 Sobic003G330500 Sobic008G129300--Sobic003G330500 Sobic001G196100 Sobic001G196100 Sobic008G129300--Sobic001G196100 Sobic001G096100 Sobic001G096100 Sobic008G129300--Sobic001G096100 Sobic009G238900 Sobic009G238900 Sobic008G129300--Sobic009G238900 Sobic002G392800 Sobic002G392800 Sobic008G129300--Sobic002G392800 Sobic002G045100 Sobic002G045100 Sobic008G129300--Sobic002G045100 Sobic005G105500 Sobic005G105500 Sobic008G129300--Sobic005G105500 Sobic006G002700 Sobic006G002700 Sobic008G129300--Sobic006G002700 Sobic003G321400--Sobic003G269100 Sobic003G321400--Sobic003G115200 Sobic003G321400--Sobic009G221800 Sobic003G321400--Sobic010G047600 Sobic003G321400--Sobic003G000200 Sobic003G078900 Sobic003G078900 Sobic003G321400--Sobic003G078900 Sobic003G321400--Sobic001G261460 Sobic001G264400 Sobic001G264400 Sobic003G321400--Sobic001G264400 Sobic001G099600 Sobic001G099600 Sobic003G321400--Sobic001G099600 Sobic003G269100--Sobic003G321400 Sobic003G269100--Sobic001G099600 Sobic003G269100--Sobic004G297950 Sobic003G269100--Sobic003G115200 Sobic003G269100--Sobic010G047600 Sobic003G269100--Sobic001G261460 Sobic003G269100--Sobic001G264400 Sobic001G484000 Sobic001G484000 Sobic003G269100--Sobic001G484000 Sobic001G046800 Sobic001G046800 Sobic003G269100--Sobic001G046800 Sobic001G338400 Sobic001G338400 Sobic001G230100--Sobic001G338400 Sobic001G110400 Sobic001G110400 Sobic001G230100--Sobic001G110400 Sobic003G348800 Sobic003G348800 Sobic001G230100--Sobic003G348800 Sobic001G007600 Sobic001G007600 Sobic001G230100--Sobic001G007600 Sobic008G088830 Sobic008G088830 Sobic001G230100--Sobic008G088830 Sobic009G229300 Sobic009G229300 Sobic001G230100--Sobic009G229300 Sobic001G230100--Sobic001G281900 Sobic009G104000 Sobic009G104000 Sobic001G230100--Sobic009G104000 Sobic004G082900 Sobic004G082900 Sobic001G230100--Sobic004G082900 Sobic007G208100 Sobic007G208100 Sobic002G034301--Sobic007G208100 Sobic005G231300 Sobic005G231300 Sobic002G034301--Sobic005G231300 Sobic005G057000 Sobic005G057000 Sobic002G034301--Sobic005G057000 Sobic005G121700 Sobic005G121700 Sobic002G034301--Sobic005G121700 Sobic007G111700 Sobic007G111700 Sobic002G034301--Sobic007G111700 Sobic008G077300 Sobic008G077300 Sobic002G034301--Sobic008G077300 Sobic002G016400 Sobic002G016400 Sobic002G034301--Sobic002G016400 Sobic003G420100 Sobic003G420100 Sobic002G034301--Sobic003G420100 Sobic003G052100 Sobic003G052100 Sobic002G034301--Sobic003G052100 Sobic009G026200 Sobic009G026200 Sobic004G134100--Sobic009G026200 Sobic010G242900 Sobic010G242900 Sobic004G134100--Sobic010G242900 Sobic001G069800 Sobic001G069800 Sobic004G134100--Sobic001G069800 Sobic004G134100--Sobic004G006700 Sobic005G159600 Sobic005G159600 Sobic004G134100--Sobic005G159600 Sobic010G138500 Sobic010G138500 Sobic004G134100--Sobic010G138500 Sobic001G215900 Sobic001G215900 Sobic004G134100--Sobic001G215900 Sobic001G366800 Sobic001G366800 Sobic004G134100--Sobic001G366800 Sobic003G151300 Sobic003G151300 Sobic004G134100--Sobic003G151300 Sobic004G297950--Sobic003G269100 Sobic005G130600 Sobic005G130600 Sobic004G297950--Sobic005G130600 Sobic004G297950--Sobic003G321400 Sobic005G110600 Sobic005G110600 Sobic004G297950--Sobic005G110600 Sobic005G047100 Sobic005G047100 Sobic004G297950--Sobic005G047100 Sobic004G297950--Sobic001G099600 Sobic004G297950--Sobic001G264400 Sobic005G052500 Sobic005G052500 Sobic004G297950--Sobic005G052500 Sobic004G297950--Sobic001G484000 Sobic004G006700--Sobic004G134100 Sobic010G224900 Sobic010G224900 Sobic004G006700--Sobic010G224900 Sobic004G006700--Sobic001G069800 Sobic001G215500 Sobic001G215500 Sobic004G006700--Sobic001G215500 Sobic004G006700--Sobic009G026200 Sobic002G427300 Sobic002G427300 Sobic004G006700--Sobic002G427300 Sobic004G051300 Sobic004G051300 Sobic004G006700--Sobic004G051300 Sobic009G123500 Sobic009G123500 Sobic004G006700--Sobic009G123500 Sobic002G393200 Sobic002G393200 Sobic004G006700--Sobic002G393200
Octagon: transcription factors


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