Gene annotation
Transcriptome id Sobic.002G142300.1
Synonym CAS1
Functional annotation cycloartenol synthase, putative, expressed
UniProt A0A1B6QB99
Pfam PF00432
Panther DB PTHR11764 PTHR11764:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT2G07050 : cycloartenol synthase 1
RAP-DB (Rice) LOC_Os11g18194.1 : cycloartenol synthase, putative, expressed
MaizeGDB (Corn) Zm00025a004369 , Zm00025a004370
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G060200 basic proline-rich protein, putative, expressed -
2 Sobic.005G036600 calmodulin-binding protein, putative, expressed -
3 Sobic.004G143400 - -
4 Sobic.001G495300 expressed protein -
5 Sobic.003G124700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@PQ loop repeat domain containing protein, expressed -
6 Sobic.001G269300 OsFBD15 - F-box and FBD domain containing protein, expressed -
7 Sobic.003G201750 - -
8 Sobic.008G088000 CRAL/TRIO domain containing protein, expressed -
9 Sobic.010G109200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -
10 Sobic.003G383300 RNA polymerase III RPC4 domain containing protein, expressed K03026: RPC4, DNA-directed RNA polymerase III subunit RPC4
11 Sobic.008G062400 similar to Diphosphonucleotide phosphatase 1(PubMedID : 29862293)@inositol-1-monophosphatase, putative, expressed K15422: 3'(2'), 5'-bisphosphate nucleotidase / inositol polyphosphate 1-phosphatase
12 Sobic.002G031600 cadmium-induced protein, putative, expressed -
13 Sobic.007G225800 NOL1/NOP2/sun family protein, putative, expressed K15335: NSUN2, tRNA (cytosine34-C5)-methyltransferase
14 Sobic.005G063700 OsFBW2 - F-box domain and WD40 repeat containing protein, expressed -
15 Sobic.006G137400 - -
16 Sobic.009G212700 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
17 Sobic.002G228700 patatin, putative, expressed -
18 Sobic.007G013000 transferase family protein, putative, expressed -
19 Sobic.006G249050 - -
20 Sobic.007G210600 ABC transporter, ATP-binding protein, putative, expressed -


Gene co-expression network
sample Sobic002G142300 Sobic002G142300 Sobic006G060200 Sobic006G060200 Sobic002G142300--Sobic006G060200 Sobic005G036600 Sobic005G036600 Sobic002G142300--Sobic005G036600 Sobic004G143400 Sobic004G143400 Sobic002G142300--Sobic004G143400 Sobic001G495300 Sobic001G495300 Sobic002G142300--Sobic001G495300 Sobic003G124700 Sobic003G124700 Sobic002G142300--Sobic003G124700 Sobic001G269300 Sobic001G269300 Sobic002G142300--Sobic001G269300 Sobic003G201750 Sobic003G201750 Sobic002G142300--Sobic003G201750 Sobic008G088000 Sobic008G088000 Sobic002G142300--Sobic008G088000 Sobic010G109200 Sobic010G109200 Sobic002G142300--Sobic010G109200 Sobic006G060200--Sobic001G269300 Sobic002G215000 Sobic002G215000 Sobic006G060200--Sobic002G215000 Sobic001G217700 Sobic001G217700 Sobic006G060200--Sobic001G217700 Sobic008G131700 Sobic008G131700 Sobic006G060200--Sobic008G131700 Sobic001G233400 Sobic001G233400 Sobic006G060200--Sobic001G233400 Sobic006G060200--Sobic005G036600 Sobic003G137100 Sobic003G137100 Sobic006G060200--Sobic003G137100 Sobic006G060200--Sobic001G495300 Sobic005G084000 Sobic005G084000 Sobic006G060200--Sobic005G084000 Sobic001G118100 Sobic001G118100 Sobic005G036600--Sobic001G118100 Sobic005G036600--Sobic001G269300 Sobic007G052900 Sobic007G052900 Sobic005G036600--Sobic007G052900 Sobic005G036600--Sobic006G060200 Sobic006G180432 Sobic006G180432 Sobic005G036600--Sobic006G180432 Sobic006G249050 Sobic006G249050 Sobic005G036600--Sobic006G249050 Sobic004G065650 Sobic004G065650 Sobic005G036600--Sobic004G065650 Sobic005G036600--Sobic001G217700 Sobic009G212700 Sobic009G212700 Sobic005G036600--Sobic009G212700 Sobic004G143400--Sobic005G084000 Sobic004G143400--Sobic001G269300 Sobic007G210600 Sobic007G210600 Sobic004G143400--Sobic007G210600 Sobic004G143400--Sobic001G495300 Sobic004G151900 Sobic004G151900 Sobic004G143400--Sobic004G151900 Sobic004G143400--Sobic006G060200 Sobic008G008500 Sobic008G008500 Sobic004G143400--Sobic008G008500 Sobic008G021700 Sobic008G021700 Sobic004G143400--Sobic008G021700 Sobic008G105300 Sobic008G105300 Sobic004G143400--Sobic008G105300 Sobic001G495300--Sobic007G210600 Sobic003G074700 Sobic003G074700 Sobic001G495300--Sobic003G074700 Sobic001G495300--Sobic005G084000 Sobic001G495300--Sobic003G137100 Sobic001G041800 Sobic001G041800 Sobic001G495300--Sobic001G041800 Sobic002G109000 Sobic002G109000 Sobic001G495300--Sobic002G109000 Sobic001G099000 Sobic001G099000 Sobic001G495300--Sobic001G099000 Sobic001G495300--Sobic008G131700 Sobic007G201400 Sobic007G201400 Sobic001G495300--Sobic007G201400 Sobic005G063700 Sobic005G063700 Sobic003G124700--Sobic005G063700 Sobic001G333200 Sobic001G333200 Sobic003G124700--Sobic001G333200 Sobic006G137400 Sobic006G137400 Sobic003G124700--Sobic006G137400 Sobic002G380500 Sobic002G380500 Sobic003G124700--Sobic002G380500 Sobic003G124700--Sobic005G036600 Sobic003G037700 Sobic003G037700 Sobic003G124700--Sobic003G037700 Sobic003G117700 Sobic003G117700 Sobic003G124700--Sobic003G117700 Sobic003G390400 Sobic003G390400 Sobic003G124700--Sobic003G390400 Sobic003G170100 Sobic003G170100 Sobic003G124700--Sobic003G170100 Sobic001G269300--Sobic006G060200 Sobic001G269300--Sobic006G180432 Sobic001G269300--Sobic005G036600 Sobic002G209600 Sobic002G209600 Sobic001G269300--Sobic002G209600 Sobic001G269300--Sobic003G201750 Sobic001G269300--Sobic007G052900 Sobic001G269300--Sobic004G143400 Sobic001G269300--Sobic008G131700 Sobic004G315800 Sobic004G315800 Sobic001G269300--Sobic004G315800 Sobic005G001900 Sobic005G001900 Sobic003G201750--Sobic005G001900 Sobic006G088580 Sobic006G088580 Sobic003G201750--Sobic006G088580 Sobic003G201750--Sobic001G269300 Sobic002G330400 Sobic002G330400 Sobic003G201750--Sobic002G330400 Sobic006G048775 Sobic006G048775 Sobic003G201750--Sobic006G048775 Sobic003G201750--Sobic006G137400 Sobic003G006833 Sobic003G006833 Sobic003G201750--Sobic003G006833 Sobic007G037900 Sobic007G037900 Sobic003G201750--Sobic007G037900 Sobic007G037100 Sobic007G037100 Sobic003G201750--Sobic007G037100 Sobic003G069100 Sobic003G069100 Sobic008G088000--Sobic003G069100 Sobic009G196800 Sobic009G196800 Sobic008G088000--Sobic009G196800 Sobic003G069000 Sobic003G069000 Sobic008G088000--Sobic003G069000 Sobic003G342300 Sobic003G342300 Sobic008G088000--Sobic003G342300 Sobic007G171600 Sobic007G171600 Sobic008G088000--Sobic007G171600 Sobic008G088000--Sobic004G143400 Sobic008G088000--Sobic010G109200 Sobic006G134400 Sobic006G134400 Sobic008G088000--Sobic006G134400 Sobic008G067200 Sobic008G067200 Sobic008G088000--Sobic008G067200 Sobic010G109200--Sobic007G171600 Sobic010G109200--Sobic001G233400 Sobic010G109200--Sobic009G196800 Sobic003G412900 Sobic003G412900 Sobic010G109200--Sobic003G412900 Sobic001G069000 Sobic001G069000 Sobic010G109200--Sobic001G069000 Sobic001G536800 Sobic001G536800 Sobic010G109200--Sobic001G536800 Sobic008G066100 Sobic008G066100 Sobic010G109200--Sobic008G066100 Sobic010G109200--Sobic006G060200 Sobic003G359100 Sobic003G359100 Sobic010G109200--Sobic003G359100
Octagon: transcription factors


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