Gene annotation
Transcriptome id Sobic.010G109200.1,Sobic.010G109200.2
Synonym Sb10g009530
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
peptide transporter PTR2, putative, expressed
UniProt C5Z840 , A0A1W0VSG2
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF178
NCBI CDD KOG1237; H+/oligopeptide symporter
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT1G68570 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os06g15370.1 : peptide transporter PTR2, putative, expressed
MaizeGDB (Corn) Zm00025a043685 , Zm00025a043686 , Zm00025a043684 , Zm00025a050396
Brachypodium KQK02639 , PNT71265 , KQK18670 , KQK06278 , KQK06279 , KQK06270 , KQK06277 , KQK02641 , KQK02640 , KQK02642
Barley HORVU2Hr1G098120.1 , HORVU7Hr1G042120.1 , HORVU7Hr1G042120.2 , HORVU7Hr1G042120.3 , HORVU7Hr1G042120.4 , HORVU7Hr1G042120.5 , HORVU7Hr1G042120.6 , HORVU7Hr1G042120.7 , HORVU7Hr1G042120.8 , HORVU7Hr1G042120.9 , HORVU4Hr1G086920.1 , HORVU3Hr1G010570.8 , HORVU3Hr1G010570.4 , HORVU3Hr1G010570.5 , HORVU3Hr1G010570.6 , HORVU3Hr1G010570.7 , HORVU3Hr1G010570.1 , HORVU3Hr1G010570.2 , HORVU3Hr1G010570.3 , HORVU1Hr1G063420.6 , HORVU1Hr1G063420.7 , HORVU1Hr1G063420.5 , HORVU1Hr1G063420.2 , HORVU1Hr1G063420.3 , HORVU1Hr1G063420.1
Wheat TraesCS3D02G057000 , TraesCS1B02G267900 , TraesCS3A02G056400 , TraesCS1D02G256700 , TraesCS3D02G056700 , TraesCS7D02G209200 , TraesCS1D02G257100 , TraesCS3B02G069100 , TraesCS3A02G057000 , TraesCS3D02G056300 , TraesCS2A02G416800 , TraesCS2D02G413900 , TraesCS7B02G113600 , TraesCS7B02G113600 , TraesCS1A02G257400 , TraesCS7A02G206400 , TraesCS3B02G069900 , TraesCS3B02G070200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G171600 Ser/Thr protein phosphatase family protein, putative, expressed K01517: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase
2 Sobic.001G233400 Citrate transporter protein, putative, expressed -
3 Sobic.009G196800 cytochrome P450, putative, expressed -
4 Sobic.003G412900 NAD(P)H dehydrogenase 18(PubMedID : 26465154)@Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
5 Sobic.001G069000 ribose-5-phosphate isomerase A, putative, expressed K01807: ribose 5-phosphate isomerase A
6 Sobic.001G536800 peptidyl-prolyl cis-trans isomerase, putative, expressed K03768: PPIB, peptidyl-prolyl cis-trans isomerase B (cyclophilin B)
7 Sobic.008G066100 3-beta hydroxysteroid dehydrogenase/isomerase family protein, putative, expressed -
8 Sobic.006G060200 basic proline-rich protein, putative, expressed -
9 Sobic.003G359100 sedoheptulose-bisphosphatase(PubMedID : 26465154)@fructose-1,6-bisphosphatase, putative, expressed K01100: sedoheptulose-bisphosphatase
10 Sobic.001G010100 ankyrin repeat domain containing protein, expressed -
11 Sobic.004G023200 Polyketide cyclase/dehydrase and lipid transport superfamily protein(PubMedID : 26465154)@membrane related protein CP5, putative, expressed -
12 Sobic.001G314200 expressed protein -
13 Sobic.003G137100 protoporphyrinogen oxidase, chloroplast precursor, putative, expressed K00231: PPOX, protoporphyrinogen/coproporphyrinogen III oxidase
14 Sobic.004G035500 -(PubMedID : 26976818)@Involved in photorespiratory pathway(PubMedID : 12887583)@dicarboxylate transporter 3(PubMedID : 27016024)@citrate transporter, putative, expressed K03319: divalent anion:Na+ symporter, DASS family
15 Sobic.002G098800 peroxiredoxin, putative, expressed -
16 Sobic.001G035800 heavy metal-associated domain containing protein, expressed -
17 Sobic.004G272100 phosphoribulokinase/Uridine kinase family protein, expressed K00855: PRK, phosphoribulokinase
18 Sobic.006G093900 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
19 Sobic.004G308700 photosystem I light harvesting complex gene 5(PubMedID : 26465154)@chlorophyll A-B binding protein, putative, expressed K08911: light-harvesting complex I chlorophyll a/b binding protein 5
20 Sobic.003G371600 proton-dependent oligopeptide transport, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4


Gene co-expression network
sample Sobic010G109200 Sobic010G109200 Sobic007G171600 Sobic007G171600 Sobic010G109200--Sobic007G171600 Sobic001G233400 Sobic001G233400 Sobic010G109200--Sobic001G233400 Sobic009G196800 Sobic009G196800 Sobic010G109200--Sobic009G196800 Sobic003G412900 Sobic003G412900 Sobic010G109200--Sobic003G412900 Sobic001G069000 Sobic001G069000 Sobic010G109200--Sobic001G069000 Sobic001G536800 Sobic001G536800 Sobic010G109200--Sobic001G536800 Sobic008G066100 Sobic008G066100 Sobic010G109200--Sobic008G066100 Sobic006G060200 Sobic006G060200 Sobic010G109200--Sobic006G060200 Sobic003G359100 Sobic003G359100 Sobic010G109200--Sobic003G359100 Sobic002G000500 Sobic002G000500 Sobic007G171600--Sobic002G000500 Sobic003G069100 Sobic003G069100 Sobic007G171600--Sobic003G069100 Sobic010G109500 Sobic010G109500 Sobic007G171600--Sobic010G109500 Sobic010G276400 Sobic010G276400 Sobic007G171600--Sobic010G276400 Sobic003G199800 Sobic003G199800 Sobic007G171600--Sobic003G199800 Sobic004G023200 Sobic004G023200 Sobic007G171600--Sobic004G023200 Sobic002G040100 Sobic002G040100 Sobic007G171600--Sobic002G040100 Sobic001G338700 Sobic001G338700 Sobic007G171600--Sobic001G338700 Sobic006G234100 Sobic006G234100 Sobic007G171600--Sobic006G234100 Sobic001G233400--Sobic004G023200 Sobic006G103400 Sobic006G103400 Sobic001G233400--Sobic006G103400 Sobic001G233400--Sobic001G536800 Sobic003G137100 Sobic003G137100 Sobic001G233400--Sobic003G137100 Sobic002G385700 Sobic002G385700 Sobic001G233400--Sobic002G385700 Sobic001G233400--Sobic009G196800 Sobic001G233400--Sobic001G069000 Sobic010G096300 Sobic010G096300 Sobic001G233400--Sobic010G096300 Sobic001G233400--Sobic006G060200 Sobic010G019700 Sobic010G019700 Sobic009G196800--Sobic010G019700 Sobic009G196800--Sobic007G171600 Sobic009G196800--Sobic004G023200 Sobic009G196800--Sobic001G233400 Sobic009G196800--Sobic003G069100 Sobic002G098800 Sobic002G098800 Sobic009G196800--Sobic002G098800 Sobic009G196800--Sobic001G069000 Sobic002G033800 Sobic002G033800 Sobic009G196800--Sobic002G033800 Sobic009G085500 Sobic009G085500 Sobic009G196800--Sobic009G085500 Sobic003G412900--Sobic001G069000 Sobic003G387100 Sobic003G387100 Sobic003G412900--Sobic003G387100 Sobic001G314200 Sobic001G314200 Sobic003G412900--Sobic001G314200 Sobic008G102000 Sobic008G102000 Sobic003G412900--Sobic008G102000 Sobic006G093900 Sobic006G093900 Sobic003G412900--Sobic006G093900 Sobic009G059300 Sobic009G059300 Sobic003G412900--Sobic009G059300 Sobic001G168800 Sobic001G168800 Sobic003G412900--Sobic001G168800 Sobic006G101500 Sobic006G101500 Sobic003G412900--Sobic006G101500 Sobic009G030900 Sobic009G030900 Sobic003G412900--Sobic009G030900 Sobic001G069000--Sobic003G412900 Sobic009G125400 Sobic009G125400 Sobic001G069000--Sobic009G125400 Sobic001G069000--Sobic002G098800 Sobic006G010900 Sobic006G010900 Sobic001G069000--Sobic006G010900 Sobic001G069000--Sobic001G536800 Sobic004G308700 Sobic004G308700 Sobic001G069000--Sobic004G308700 Sobic001G069000--Sobic003G387100 Sobic001G069000--Sobic001G314200 Sobic004G272100 Sobic004G272100 Sobic001G069000--Sobic004G272100 Sobic001G536800--Sobic001G069000 Sobic001G536800--Sobic009G085500 Sobic001G536800--Sobic003G137100 Sobic001G536800--Sobic006G103400 Sobic001G536800--Sobic002G098800 Sobic001G536800--Sobic009G125400 Sobic001G536800--Sobic008G066100 Sobic001G536800--Sobic004G308700 Sobic001G041800 Sobic001G041800 Sobic001G536800--Sobic001G041800 Sobic001G425400 Sobic001G425400 Sobic008G066100--Sobic001G425400 Sobic008G066100--Sobic003G359100 Sobic008G066100--Sobic004G308700 Sobic007G207800 Sobic007G207800 Sobic008G066100--Sobic007G207800 Sobic008G134800 Sobic008G134800 Sobic008G066100--Sobic008G134800 Sobic008G066100--Sobic004G272100 Sobic004G035500 Sobic004G035500 Sobic008G066100--Sobic004G035500 Sobic007G223500 Sobic007G223500 Sobic008G066100--Sobic007G223500 Sobic002G030500 Sobic002G030500 Sobic008G066100--Sobic002G030500 Sobic001G269300 Sobic001G269300 Sobic006G060200--Sobic001G269300 Sobic002G215000 Sobic002G215000 Sobic006G060200--Sobic002G215000 Sobic001G217700 Sobic001G217700 Sobic006G060200--Sobic001G217700 Sobic008G131700 Sobic008G131700 Sobic006G060200--Sobic008G131700 Sobic006G060200--Sobic001G233400 Sobic005G036600 Sobic005G036600 Sobic006G060200--Sobic005G036600 Sobic006G060200--Sobic003G137100 Sobic001G495300 Sobic001G495300 Sobic006G060200--Sobic001G495300 Sobic005G084000 Sobic005G084000 Sobic006G060200--Sobic005G084000 Sobic003G359100--Sobic004G035500 Sobic003G359100--Sobic008G134800 Sobic003G359100--Sobic008G066100 Sobic003G359100--Sobic001G425400 Sobic003G359100--Sobic007G207800 Sobic004G249800 Sobic004G249800 Sobic003G359100--Sobic004G249800 Sobic007G071500 Sobic007G071500 Sobic003G359100--Sobic007G071500 Sobic003G359100--Sobic004G272100 Sobic006G105900 Sobic006G105900 Sobic003G359100--Sobic006G105900
Octagon: transcription factors


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