Gene annotation
Transcriptome id Sobic.002G217166.1,Sobic.002G217166.2
Synonym -
Functional annotation -
UniProt A0A1W0W598 , A0A1W0W597
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G137000 only inducible by pathogen inoculation(PubMedID : 20529887)@SbCHS1 to SbCHS7 (AF152548-AF152554) are highly conserved (at least 97.5% sequence identity at amino acid level) and closely related to the maize (Zea mays) C2 and Whp genes encoding CHS enzymes.(PubMedID : 15821144)@chalcone synthase, putative, expressed K00660: chalcone synthase
2 Sobic.004G304100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K15095: (+)-neomenthol dehydrogenase
3 Sobic.003G164800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.001G231600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
5 Sobic.001G495164 - -
6 Sobic.010G102300 expressed protein -
7 Sobic.004G277000 purine permease, putative, expressed -
8 Sobic.004G304300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K15095: (+)-neomenthol dehydrogenase
9 Sobic.007G135201 - -
10 Sobic.001G190200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transporter family protein, putative, expressed -
11 Sobic.003G425850 - K00799: GST, glutathione S-transferase
12 Sobic.007G066932 - -
13 Sobic.009G003900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ras-related protein, putative, expressed K07874: Ras-related protein Rab-1A
14 Sobic.005G101800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
15 Sobic.001G319600 Relative abundance under control condition and upregulated in cold susceptible sorghum under cold stress(PubMedID : 26645959)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
16 Sobic.007G067600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
17 Sobic.010G099900 expressed protein -
18 Sobic.003G426100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.001G319700 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.006G173900 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase


Gene co-expression network
sample Sobic002G217166 Sobic002G217166 Sobic005G137000 Sobic005G137000 Sobic002G217166--Sobic005G137000 Sobic004G304100 Sobic004G304100 Sobic002G217166--Sobic004G304100 Sobic003G164800 Sobic003G164800 Sobic002G217166--Sobic003G164800 Sobic001G231600 Sobic001G231600 Sobic002G217166--Sobic001G231600 Sobic001G495164 Sobic001G495164 Sobic002G217166--Sobic001G495164 Sobic010G102300 Sobic010G102300 Sobic002G217166--Sobic010G102300 Sobic004G277000 Sobic004G277000 Sobic002G217166--Sobic004G277000 Sobic004G304300 Sobic004G304300 Sobic002G217166--Sobic004G304300 Sobic007G135201 Sobic007G135201 Sobic002G217166--Sobic007G135201 Sobic005G136300 Sobic005G136300 Sobic005G137000--Sobic005G136300 Sobic005G137200 Sobic005G137200 Sobic005G137000--Sobic005G137200 Sobic002G035700 Sobic002G035700 Sobic005G137000--Sobic002G035700 Sobic005G137000--Sobic002G217166 Sobic002G000400 Sobic002G000400 Sobic005G137000--Sobic002G000400 Sobic005G137100 Sobic005G137100 Sobic005G137000--Sobic005G137100 Sobic010G004200 Sobic010G004200 Sobic005G137000--Sobic010G004200 Sobic005G137000--Sobic003G164800 Sobic009G003900 Sobic009G003900 Sobic005G137000--Sobic009G003900 Sobic004G304100--Sobic004G304300 Sobic007G066932 Sobic007G066932 Sobic004G304100--Sobic007G066932 Sobic003G426100 Sobic003G426100 Sobic004G304100--Sobic003G426100 Sobic002G195400 Sobic002G195400 Sobic004G304100--Sobic002G195400 Sobic004G304100--Sobic003G164800 Sobic005G101800 Sobic005G101800 Sobic004G304100--Sobic005G101800 Sobic003G425850 Sobic003G425850 Sobic004G304100--Sobic003G425850 Sobic001G319500 Sobic001G319500 Sobic004G304100--Sobic001G319500 Sobic004G088551 Sobic004G088551 Sobic004G304100--Sobic004G088551 Sobic003G164800--Sobic002G195400 Sobic007G067600 Sobic007G067600 Sobic003G164800--Sobic007G067600 Sobic003G164800--Sobic005G101800 Sobic010G117900 Sobic010G117900 Sobic003G164800--Sobic010G117900 Sobic001G319700 Sobic001G319700 Sobic003G164800--Sobic001G319700 Sobic003G426000 Sobic003G426000 Sobic003G164800--Sobic003G426000 Sobic003G164800--Sobic010G102300 Sobic003G164800--Sobic004G088551 Sobic003G164800--Sobic001G495164 Sobic001G231600--Sobic007G135201 Sobic001G231600--Sobic007G067600 Sobic001G231600--Sobic001G495164 Sobic006G084600 Sobic006G084600 Sobic001G231600--Sobic006G084600 Sobic007G067350 Sobic007G067350 Sobic001G231600--Sobic007G067350 Sobic001G231600--Sobic010G102300 Sobic001G231600--Sobic002G195400 Sobic004G128400 Sobic004G128400 Sobic001G231600--Sobic004G128400 Sobic004G221500 Sobic004G221500 Sobic001G231600--Sobic004G221500 Sobic001G495164--Sobic007G067600 Sobic001G495164--Sobic001G231600 Sobic001G330500 Sobic001G330500 Sobic001G495164--Sobic001G330500 Sobic001G495164--Sobic010G102300 Sobic001G495164--Sobic005G101800 Sobic001G495164--Sobic002G195400 Sobic001G495164--Sobic010G117900 Sobic001G495164--Sobic001G319700 Sobic001G495164--Sobic003G164800 Sobic010G102300--Sobic001G319700 Sobic010G102300--Sobic002G195400 Sobic010G035700 Sobic010G035700 Sobic010G102300--Sobic010G035700 Sobic010G102300--Sobic007G066932 Sobic010G102300--Sobic003G426100 Sobic010G102300--Sobic007G067600 Sobic010G102300--Sobic007G067350 Sobic010G102300--Sobic004G304300 Sobic010G102300--Sobic001G231600 Sobic004G050000 Sobic004G050000 Sobic004G277000--Sobic004G050000 Sobic009G043600 Sobic009G043600 Sobic004G277000--Sobic009G043600 Sobic002G249000 Sobic002G249000 Sobic004G277000--Sobic002G249000 Sobic004G277000--Sobic009G003900 Sobic002G267500 Sobic002G267500 Sobic004G277000--Sobic002G267500 Sobic006G173900 Sobic006G173900 Sobic004G277000--Sobic006G173900 Sobic004G276100 Sobic004G276100 Sobic004G277000--Sobic004G276100 Sobic009G177800 Sobic009G177800 Sobic004G277000--Sobic009G177800 Sobic002G264400 Sobic002G264400 Sobic004G277000--Sobic002G264400 Sobic004G304300--Sobic007G066932 Sobic004G304300--Sobic003G426100 Sobic004G304300--Sobic002G195400 Sobic004G304300--Sobic003G426000 Sobic004G304300--Sobic010G102300 Sobic004G304300--Sobic007G067350 Sobic004G304300--Sobic001G319700 Sobic004G304300--Sobic005G101800 Sobic009G128700 Sobic009G128700 Sobic004G304300--Sobic009G128700 Sobic007G135201--Sobic003G426100 Sobic007G135201--Sobic001G231600 Sobic007G135201--Sobic007G066932 Sobic007G135201--Sobic007G067600 Sobic007G135201--Sobic002G195400 Sobic007G135201--Sobic007G067350 Sobic007G135201--Sobic010G102300 Sobic007G135201--Sobic010G035700 Sobic007G135201--Sobic006G084600
Octagon: transcription factors


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