Gene annotation
Transcriptome id Sobic.002G229650.1
Synonym -
Functional annotation -
UniProt -
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G409300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phosphatidylinositol transfer protein alpha isoform, putative, expressed -
2 Sobic.004G211900 "Significantly enhanced the expression levels by drought stress, up-regulated by silicon application under drought stress "(PubMedID : 24813726)@S-adenosyl-l-methionine decarboxylase leader peptide, putative, expressed K01611: speD, S-adenosylmethionine decarboxylase
3 Sobic.004G211866 - -
4 Sobic.006G146100 Os4bglu18 - monolignol beta-glucoside homologue, expressed K05350: beta-glucosidase
5 Sobic.001G092000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.001G062300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldehyde oxidase, putative, expressed K11817: indole-3-acetaldehyde oxidase
7 Sobic.003G397500 expressed protein -
8 Sobic.001G235500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
9 Sobic.007G210500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -
10 Sobic.001G217400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1336 domain containing protein, expressed -
11 Sobic.001G517800 NIN, putative, expressed -
12 Sobic.008G059100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
13 Sobic.006G056800 - -
14 Sobic.001G432550 - -
15 Sobic.003G320700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.010G227300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
17 Sobic.004G017000 leucine rich repeat protein, putative, expressed -
18 Sobic.006G104600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.005G221250 - -
20 Sobic.008G088818 - -


Gene co-expression network
sample Sobic002G229650 Sobic002G229650 Sobic001G409300 Sobic001G409300 Sobic002G229650--Sobic001G409300 Sobic004G211900 Sobic004G211900 Sobic002G229650--Sobic004G211900 Sobic004G211866 Sobic004G211866 Sobic002G229650--Sobic004G211866 Sobic006G146100 Sobic006G146100 Sobic002G229650--Sobic006G146100 Sobic001G092000 Sobic001G092000 Sobic002G229650--Sobic001G092000 Sobic001G062300 Sobic001G062300 Sobic002G229650--Sobic001G062300 Sobic003G397500 Sobic003G397500 Sobic002G229650--Sobic003G397500 Sobic001G235500 Sobic001G235500 Sobic002G229650--Sobic001G235500 Sobic007G210500 Sobic007G210500 Sobic002G229650--Sobic007G210500 Sobic008G059100 Sobic008G059100 Sobic001G409300--Sobic008G059100 Sobic001G409300--Sobic004G211900 Sobic003G242000 Sobic003G242000 Sobic001G409300--Sobic003G242000 Sobic001G217400 Sobic001G217400 Sobic001G409300--Sobic001G217400 Sobic010G272200 Sobic010G272200 Sobic001G409300--Sobic010G272200 Sobic003G051600 Sobic003G051600 Sobic001G409300--Sobic003G051600 Sobic003G269800 Sobic003G269800 Sobic001G409300--Sobic003G269800 Sobic001G409300--Sobic003G397500 Sobic009G136100 Sobic009G136100 Sobic001G409300--Sobic009G136100 Sobic004G211900--Sobic004G211866 Sobic001G350900 Sobic001G350900 Sobic004G211900--Sobic001G350900 Sobic004G211900--Sobic001G409300 Sobic004G211900--Sobic001G217400 Sobic004G211900--Sobic001G062300 Sobic004G211900--Sobic007G210500 Sobic004G211900--Sobic003G269800 Sobic004G211900--Sobic008G059100 Sobic006G275100 Sobic006G275100 Sobic004G211900--Sobic006G275100 Sobic004G211866--Sobic004G211900 Sobic004G211866--Sobic001G062300 Sobic004G211866--Sobic001G350900 Sobic004G211866--Sobic001G217400 Sobic009G080400 Sobic009G080400 Sobic004G211866--Sobic009G080400 Sobic004G211866--Sobic007G210500 Sobic010G177400 Sobic010G177400 Sobic004G211866--Sobic010G177400 Sobic002G262300 Sobic002G262300 Sobic004G211866--Sobic002G262300 Sobic004G189200 Sobic004G189200 Sobic004G211866--Sobic004G189200 Sobic006G146100--Sobic001G235500 Sobic006G146100--Sobic001G092000 Sobic009G038501 Sobic009G038501 Sobic006G146100--Sobic009G038501 Sobic006G146100--Sobic001G217400 Sobic005G215766 Sobic005G215766 Sobic006G146100--Sobic005G215766 Sobic003G059300 Sobic003G059300 Sobic006G146100--Sobic003G059300 Sobic008G144500 Sobic008G144500 Sobic006G146100--Sobic008G144500 Sobic009G197700 Sobic009G197700 Sobic006G146100--Sobic009G197700 Sobic003G360900 Sobic003G360900 Sobic006G146100--Sobic003G360900 Sobic002G274800 Sobic002G274800 Sobic001G092000--Sobic002G274800 Sobic001G092000--Sobic001G409300 Sobic003G252300 Sobic003G252300 Sobic001G092000--Sobic003G252300 Sobic001G092000--Sobic001G235500 Sobic001G092000--Sobic006G146100 Sobic006G125400 Sobic006G125400 Sobic001G092000--Sobic006G125400 Sobic003G281900 Sobic003G281900 Sobic001G092000--Sobic003G281900 Sobic001G092000--Sobic001G217400 Sobic001G092000--Sobic003G269800 Sobic006G257800 Sobic006G257800 Sobic001G062300--Sobic006G257800 Sobic001G062300--Sobic004G189200 Sobic001G062300--Sobic006G275100 Sobic008G167600 Sobic008G167600 Sobic001G062300--Sobic008G167600 Sobic007G190000 Sobic007G190000 Sobic001G062300--Sobic007G190000 Sobic001G062300--Sobic004G211866 Sobic003G301500 Sobic003G301500 Sobic001G062300--Sobic003G301500 Sobic010G272800 Sobic010G272800 Sobic001G062300--Sobic010G272800 Sobic002G383600 Sobic002G383600 Sobic001G062300--Sobic002G383600 Sobic003G252400 Sobic003G252400 Sobic003G397500--Sobic003G252400 Sobic008G075600 Sobic008G075600 Sobic003G397500--Sobic008G075600 Sobic004G211301 Sobic004G211301 Sobic003G397500--Sobic004G211301 Sobic002G331450 Sobic002G331450 Sobic003G397500--Sobic002G331450 Sobic010G026500 Sobic010G026500 Sobic003G397500--Sobic010G026500 Sobic002G110200 Sobic002G110200 Sobic003G397500--Sobic002G110200 Sobic002G229600 Sobic002G229600 Sobic003G397500--Sobic002G229600 Sobic008G031300 Sobic008G031300 Sobic003G397500--Sobic008G031300 Sobic010G085400 Sobic010G085400 Sobic003G397500--Sobic010G085400 Sobic001G235500--Sobic009G136100 Sobic009G118600 Sobic009G118600 Sobic001G235500--Sobic009G118600 Sobic001G235500--Sobic005G215766 Sobic006G115300 Sobic006G115300 Sobic001G235500--Sobic006G115300 Sobic004G200800 Sobic004G200800 Sobic001G235500--Sobic004G200800 Sobic009G236300 Sobic009G236300 Sobic001G235500--Sobic009G236300 Sobic001G235500--Sobic006G146100 Sobic006G086100 Sobic006G086100 Sobic001G235500--Sobic006G086100 Sobic009G097300 Sobic009G097300 Sobic001G235500--Sobic009G097300 Sobic001G282600 Sobic001G282600 Sobic007G210500--Sobic001G282600 Sobic007G210500--Sobic002G262300 Sobic007G210500--Sobic009G080400 Sobic010G169000 Sobic010G169000 Sobic007G210500--Sobic010G169000 Sobic001G305500 Sobic001G305500 Sobic007G210500--Sobic001G305500 Sobic007G210500--Sobic003G051600 Sobic006G104600 Sobic006G104600 Sobic007G210500--Sobic006G104600 Sobic007G210500--Sobic001G217400 Sobic004G225200 Sobic004G225200 Sobic007G210500--Sobic004G225200
Octagon: transcription factors


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