Gene annotation
Transcriptome id Sobic.002G354000.1
Synonym PMT5, Sb02g037580, ATPLT5, ATPMT5
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
transporter family protein, putative, expressed
UniProt C5XCG3
Pfam PF07690
Panther DB PTHR23500 PTHR23500:SF152
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT3G18830 : polyol/monosaccharide transporter 5
RAP-DB (Rice) LOC_Os07g39350.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a048523 , Zm00025a048520 , Zm00025a048527 , Zm00025a015021 , Zm00025a015023
Brachypodium KQK15521
Barley HORVU2Hr1G036570.1 , HORVU2Hr1G036570.3 , HORVU2Hr1G036570.2 , HORVU2Hr1G036570.5 , HORVU2Hr1G036570.4 , HORVU2Hr1G036570.6
Wheat TraesCS1A02G426300 , TraesCS2A02G188700 , TraesCS1B02G460600 , TraesCS1B02G460600 , TraesCS1D02G435800 , TraesCS2D02G198900 , TraesCS2B02G218600 , TraesCS1B02G460700 , TraesCS1B02G460700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G158901 - -
2 Sobic.001G064800 expp1 protein precursor, putative, expressed -
3 Sobic.005G117400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transcription factor(PubMedID : 30367619)@WRKY72, expressed -
4 Sobic.005G229700 GRAS family transcription factor domain containing protein, expressed -
5 Sobic.010G163000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
6 Sobic.004G058000 VQ domain containing protein, putative, expressed -
7 Sobic.001G399100 peroxisomal biogenesis factor 11, putative, expressed -
8 Sobic.003G162700 expressed protein -
9 Sobic.001G454100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
10 Sobic.009G111600 expressed protein -
11 Sobic.006G159300 remorin, putative, expressed -
12 Sobic.003G277500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
13 Sobic.010G107100 expressed protein -
14 Sobic.009G230100 expressed protein -
15 Sobic.004G301400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein K08331: autophagy-related protein 13
16 Sobic.006G192500 CAMK_CAMK_like.27 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
17 Sobic.002G109400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@LTPL40 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.003G299800 RING-H2 finger protein, putative, expressed K19038: E3 ubiquitin-protein ligase ATL41
19 Sobic.004G010300 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
20 Sobic.005G000100 monoglyceride lipase, putative, expressed -


Gene co-expression network
sample Sobic002G354000 Sobic002G354000 Sobic004G158901 Sobic004G158901 Sobic002G354000--Sobic004G158901 Sobic001G064800 Sobic001G064800 Sobic002G354000--Sobic001G064800 Sobic005G117400 Sobic005G117400 Sobic002G354000--Sobic005G117400 Sobic005G229700 Sobic005G229700 Sobic002G354000--Sobic005G229700 Sobic010G163000 Sobic010G163000 Sobic002G354000--Sobic010G163000 Sobic004G058000 Sobic004G058000 Sobic002G354000--Sobic004G058000 Sobic001G399100 Sobic001G399100 Sobic002G354000--Sobic001G399100 Sobic003G162700 Sobic003G162700 Sobic002G354000--Sobic003G162700 Sobic001G454100 Sobic001G454100 Sobic002G354000--Sobic001G454100 Sobic002G224100 Sobic002G224100 Sobic004G158901--Sobic002G224100 Sobic004G158901--Sobic005G117400 Sobic004G158901--Sobic004G058000 Sobic009G241700 Sobic009G241700 Sobic004G158901--Sobic009G241700 Sobic006G192500 Sobic006G192500 Sobic004G158901--Sobic006G192500 Sobic004G158901--Sobic001G399100 Sobic002G379866 Sobic002G379866 Sobic004G158901--Sobic002G379866 Sobic007G025700 Sobic007G025700 Sobic004G158901--Sobic007G025700 Sobic004G158901--Sobic010G163000 Sobic006G182100 Sobic006G182100 Sobic001G064800--Sobic006G182100 Sobic002G261800 Sobic002G261800 Sobic001G064800--Sobic002G261800 Sobic001G067601 Sobic001G067601 Sobic001G064800--Sobic001G067601 Sobic010G153100 Sobic010G153100 Sobic001G064800--Sobic010G153100 Sobic001G019900 Sobic001G019900 Sobic001G064800--Sobic001G019900 Sobic001G445800 Sobic001G445800 Sobic001G064800--Sobic001G445800 Sobic010G204300 Sobic010G204300 Sobic001G064800--Sobic010G204300 Sobic004G157800 Sobic004G157800 Sobic001G064800--Sobic004G157800 Sobic001G206400 Sobic001G206400 Sobic001G064800--Sobic001G206400 Sobic005G117400--Sobic004G158901 Sobic007G125900 Sobic007G125900 Sobic005G117400--Sobic007G125900 Sobic005G117400--Sobic004G058000 Sobic002G249000 Sobic002G249000 Sobic005G117400--Sobic002G249000 Sobic003G348400 Sobic003G348400 Sobic005G117400--Sobic003G348400 Sobic004G050000 Sobic004G050000 Sobic005G117400--Sobic004G050000 Sobic003G232900 Sobic003G232900 Sobic005G117400--Sobic003G232900 Sobic005G117400--Sobic007G025700 Sobic010G224200 Sobic010G224200 Sobic005G117400--Sobic010G224200 Sobic003G265200 Sobic003G265200 Sobic005G229700--Sobic003G265200 Sobic001G422900 Sobic001G422900 Sobic005G229700--Sobic001G422900 Sobic002G245800 Sobic002G245800 Sobic005G229700--Sobic002G245800 Sobic001G037000 Sobic001G037000 Sobic005G229700--Sobic001G037000 Sobic005G229700--Sobic001G399100 Sobic003G181500 Sobic003G181500 Sobic005G229700--Sobic003G181500 Sobic002G055600 Sobic002G055600 Sobic005G229700--Sobic002G055600 Sobic009G070400 Sobic009G070400 Sobic005G229700--Sobic009G070400 Sobic002G333400 Sobic002G333400 Sobic005G229700--Sobic002G333400 Sobic010G102150 Sobic010G102150 Sobic010G163000--Sobic010G102150 Sobic010G163000--Sobic005G229700 Sobic010G163000--Sobic001G454100 Sobic003G146100 Sobic003G146100 Sobic010G163000--Sobic003G146100 Sobic010G107100 Sobic010G107100 Sobic010G163000--Sobic010G107100 Sobic010G163000--Sobic001G399100 Sobic005G109000 Sobic005G109000 Sobic010G163000--Sobic005G109000 Sobic001G195100 Sobic001G195100 Sobic010G163000--Sobic001G195100 Sobic010G163000--Sobic004G158901 Sobic004G058000--Sobic010G107100 Sobic004G058000--Sobic001G399100 Sobic004G058000--Sobic005G117400 Sobic004G058000--Sobic010G224200 Sobic004G058000--Sobic009G241700 Sobic004G058000--Sobic004G158901 Sobic003G019200 Sobic003G019200 Sobic004G058000--Sobic003G019200 Sobic004G058000--Sobic004G050000 Sobic004G058000--Sobic002G249000 Sobic009G033700 Sobic009G033700 Sobic001G399100--Sobic009G033700 Sobic009G046600 Sobic009G046600 Sobic001G399100--Sobic009G046600 Sobic001G399100--Sobic010G107100 Sobic004G186500 Sobic004G186500 Sobic001G399100--Sobic004G186500 Sobic001G399100--Sobic003G019200 Sobic009G200700 Sobic009G200700 Sobic001G399100--Sobic009G200700 Sobic005G028700 Sobic005G028700 Sobic001G399100--Sobic005G028700 Sobic001G399100--Sobic005G229700 Sobic010G086200 Sobic010G086200 Sobic001G399100--Sobic010G086200 Sobic003G162700--Sobic001G067601 Sobic003G162700--Sobic009G070400 Sobic003G162700--Sobic002G333400 Sobic006G158600 Sobic006G158600 Sobic003G162700--Sobic006G158600 Sobic003G334600 Sobic003G334600 Sobic003G162700--Sobic003G334600 Sobic010G238600 Sobic010G238600 Sobic003G162700--Sobic010G238600 Sobic010G274900 Sobic010G274900 Sobic003G162700--Sobic010G274900 Sobic007G025500 Sobic007G025500 Sobic003G162700--Sobic007G025500 Sobic008G136400 Sobic008G136400 Sobic003G162700--Sobic008G136400 Sobic001G454100--Sobic010G107100 Sobic001G454100--Sobic010G163000 Sobic001G454100--Sobic005G229700 Sobic006G216700 Sobic006G216700 Sobic001G454100--Sobic006G216700 Sobic003G192100 Sobic003G192100 Sobic001G454100--Sobic003G192100 Sobic003G285500 Sobic003G285500 Sobic001G454100--Sobic003G285500 Sobic001G454100--Sobic006G158600 Sobic003G215800 Sobic003G215800 Sobic001G454100--Sobic003G215800 Sobic008G059200 Sobic008G059200 Sobic001G454100--Sobic008G059200
Octagon: transcription factors


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