Gene annotation
Transcriptome id Sobic.002G422000.1
Synonym MYR1, Sb02g043320, ATMYR1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Myb transcription factor, putative, expressed
UniProt C5X5Q3
Pfam PF00249 PF14379
Panther DB PTHR31499 PTHR31499:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G18240 : myb-related protein 1
RAP-DB (Rice) LOC_Os03g20900.1 : Myb transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a049198
Brachypodium KQK14577 , KQK21879 , KQK21878
Barley HORVU2Hr1G017240.10 , HORVU2Hr1G017240.11 , HORVU2Hr1G017240.7 , HORVU2Hr1G017240.4 , HORVU2Hr1G017240.5 , HORVU2Hr1G017240.8 , HORVU2Hr1G017240.9 , HORVU2Hr1G017240.2 , HORVU2Hr1G017240.3 , HORVU2Hr1G017240.1 , HORVU2Hr1G017240.6
Wheat TraesCS4D02G176500 , TraesCS2A02G100600 , TraesCS2B02G117800 , TraesCS4B02G174600 , TraesCS4B02G174600 , TraesCS4B02G174600 , TraesCS2D02G100100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G016400 CDP-alcohol phosphatidyltransferase, putative, expressed K00993: ethanolaminephosphotransferase
2 Sobic.004G033700 expressed protein -
3 Sobic.001G078400 OsSigP2 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/Lys catalytic dyad, expressed K03100: signal peptidase I
4 Sobic.006G092000 expressed protein K18172: COX assembly mitochondrial protein 2
5 Sobic.007G126400 CPuORF27 - conserved peptide uORF-containing transcript, expressed K09338: homeobox-leucine zipper protein
6 Sobic.002G310000 PPR repeat containing protein, expressed -
7 Sobic.009G063100 Mitochondrial substrate carrier family protein(PubMedID : 26465154)@mitochondrial carrier protein, putative, expressed -
8 Sobic.007G029700 BTBN17 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
9 Sobic.003G443500 cyclase/dehydrase family protein, expressed -
10 Sobic.002G218500 lecithine cholesterol acyltransferase, putative, expressed K00679: phospholipid:diacylglycerol acyltransferase
11 Sobic.008G001900 mitochondrial substrate carrier family protein, putative, expressed -
12 Sobic.005G100600 bZIP transcription factor domain containing protein, expressed -
13 Sobic.004G263400 expressed protein -
14 Sobic.005G188600 - -
15 Sobic.003G418100 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
16 Sobic.010G188600 stromal membrane-associated protein, putative, expressed K12486: stromal membrane-associated protein
17 Sobic.005G110502 - -
18 Sobic.008G094000 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
19 Sobic.007G093900 acetyltransferase, GNAT family, putative, expressed -
20 Sobic.006G031800 - -


Gene co-expression network
sample Sobic002G422000 Sobic002G422000 Sobic004G016400 Sobic004G016400 Sobic002G422000--Sobic004G016400 Sobic004G033700 Sobic004G033700 Sobic002G422000--Sobic004G033700 Sobic001G078400 Sobic001G078400 Sobic002G422000--Sobic001G078400 Sobic006G092000 Sobic006G092000 Sobic002G422000--Sobic006G092000 Sobic007G126400 Sobic007G126400 Sobic002G422000--Sobic007G126400 Sobic002G310000 Sobic002G310000 Sobic002G422000--Sobic002G310000 Sobic009G063100 Sobic009G063100 Sobic002G422000--Sobic009G063100 Sobic007G029700 Sobic007G029700 Sobic002G422000--Sobic007G029700 Sobic003G443500 Sobic003G443500 Sobic002G422000--Sobic003G443500 Sobic005G149400 Sobic005G149400 Sobic004G016400--Sobic005G149400 Sobic001G025400 Sobic001G025400 Sobic004G016400--Sobic001G025400 Sobic003G387100 Sobic003G387100 Sobic004G016400--Sobic003G387100 Sobic004G307400 Sobic004G307400 Sobic004G016400--Sobic004G307400 Sobic009G030900 Sobic009G030900 Sobic004G016400--Sobic009G030900 Sobic001G309300 Sobic001G309300 Sobic004G016400--Sobic001G309300 Sobic009G059300 Sobic009G059300 Sobic004G016400--Sobic009G059300 Sobic004G336000 Sobic004G336000 Sobic004G016400--Sobic004G336000 Sobic001G291900 Sobic001G291900 Sobic004G016400--Sobic001G291900 Sobic002G335000 Sobic002G335000 Sobic004G033700--Sobic002G335000 Sobic003G354600 Sobic003G354600 Sobic004G033700--Sobic003G354600 Sobic006G274800 Sobic006G274800 Sobic004G033700--Sobic006G274800 Sobic002G181600 Sobic002G181600 Sobic004G033700--Sobic002G181600 Sobic004G054400 Sobic004G054400 Sobic004G033700--Sobic004G054400 Sobic004G033700--Sobic001G078400 Sobic010G023700 Sobic010G023700 Sobic004G033700--Sobic010G023700 Sobic001G136800 Sobic001G136800 Sobic004G033700--Sobic001G136800 Sobic004G033700--Sobic004G016400 Sobic002G030500 Sobic002G030500 Sobic001G078400--Sobic002G030500 Sobic004G026700 Sobic004G026700 Sobic001G078400--Sobic004G026700 Sobic001G078400--Sobic004G033700 Sobic008G066100 Sobic008G066100 Sobic001G078400--Sobic008G066100 Sobic001G078400--Sobic007G029700 Sobic002G000700 Sobic002G000700 Sobic001G078400--Sobic002G000700 Sobic006G147300 Sobic006G147300 Sobic001G078400--Sobic006G147300 Sobic001G338700 Sobic001G338700 Sobic001G078400--Sobic001G338700 Sobic008G015100 Sobic008G015100 Sobic001G078400--Sobic008G015100 Sobic003G110800 Sobic003G110800 Sobic006G092000--Sobic003G110800 Sobic005G100600 Sobic005G100600 Sobic006G092000--Sobic005G100600 Sobic004G193700 Sobic004G193700 Sobic006G092000--Sobic004G193700 Sobic005G059800 Sobic005G059800 Sobic006G092000--Sobic005G059800 Sobic003G229300 Sobic003G229300 Sobic006G092000--Sobic003G229300 Sobic006G173600 Sobic006G173600 Sobic006G092000--Sobic006G173600 Sobic008G115900 Sobic008G115900 Sobic006G092000--Sobic008G115900 Sobic002G091600 Sobic002G091600 Sobic006G092000--Sobic002G091600 Sobic001G516901 Sobic001G516901 Sobic006G092000--Sobic001G516901 Sobic005G188600 Sobic005G188600 Sobic007G126400--Sobic005G188600 Sobic001G484400 Sobic001G484400 Sobic007G126400--Sobic001G484400 Sobic003G003600 Sobic003G003600 Sobic007G126400--Sobic003G003600 Sobic008G094000 Sobic008G094000 Sobic007G126400--Sobic008G094000 Sobic001G073900 Sobic001G073900 Sobic007G126400--Sobic001G073900 Sobic010G099700 Sobic010G099700 Sobic007G126400--Sobic010G099700 Sobic005G110502 Sobic005G110502 Sobic007G126400--Sobic005G110502 Sobic007G126400--Sobic008G115900 Sobic001G065600 Sobic001G065600 Sobic007G126400--Sobic001G065600 Sobic009G105200 Sobic009G105200 Sobic002G310000--Sobic009G105200 Sobic003G188300 Sobic003G188300 Sobic002G310000--Sobic003G188300 Sobic002G082100 Sobic002G082100 Sobic002G310000--Sobic002G082100 Sobic002G145000 Sobic002G145000 Sobic002G310000--Sobic002G145000 Sobic002G310000--Sobic002G422000 Sobic001G261900 Sobic001G261900 Sobic002G310000--Sobic001G261900 Sobic003G193200 Sobic003G193200 Sobic002G310000--Sobic003G193200 Sobic009G105800 Sobic009G105800 Sobic002G310000--Sobic009G105800 Sobic010G110332 Sobic010G110332 Sobic002G310000--Sobic010G110332 Sobic009G063100--Sobic010G023700 Sobic007G140800 Sobic007G140800 Sobic009G063100--Sobic007G140800 Sobic001G129000 Sobic001G129000 Sobic009G063100--Sobic001G129000 Sobic010G188600 Sobic010G188600 Sobic009G063100--Sobic010G188600 Sobic004G274100 Sobic004G274100 Sobic009G063100--Sobic004G274100 Sobic006G207800 Sobic006G207800 Sobic009G063100--Sobic006G207800 Sobic009G063100--Sobic007G029700 Sobic001G102800 Sobic001G102800 Sobic009G063100--Sobic001G102800 Sobic009G237100 Sobic009G237100 Sobic009G063100--Sobic009G237100 Sobic008G001900 Sobic008G001900 Sobic007G029700--Sobic008G001900 Sobic001G064000 Sobic001G064000 Sobic007G029700--Sobic001G064000 Sobic006G128300 Sobic006G128300 Sobic007G029700--Sobic006G128300 Sobic001G043800 Sobic001G043800 Sobic007G029700--Sobic001G043800 Sobic006G038500 Sobic006G038500 Sobic007G029700--Sobic006G038500 Sobic002G218500 Sobic002G218500 Sobic007G029700--Sobic002G218500 Sobic009G129100 Sobic009G129100 Sobic007G029700--Sobic009G129100 Sobic007G029700--Sobic004G016400 Sobic007G029700--Sobic009G063100 Sobic002G036000 Sobic002G036000 Sobic003G443500--Sobic002G036000 Sobic001G391900 Sobic001G391900 Sobic003G443500--Sobic001G391900 Sobic003G443500--Sobic001G073900 Sobic003G443500--Sobic001G065600 Sobic002G102200 Sobic002G102200 Sobic003G443500--Sobic002G102200 Sobic003G443500--Sobic008G001900 Sobic006G101500 Sobic006G101500 Sobic003G443500--Sobic006G101500 Sobic003G443500--Sobic005G188600 Sobic001G317400 Sobic001G317400 Sobic003G443500--Sobic001G317400
Octagon: transcription factors


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