Gene annotation
Transcriptome id Sobic.002G427700.2,Sobic.002G427700.1
Synonym Sb02g043800
Functional annotation expressed protein
UniProt C5X6E3 , A0A1W0W828
Pfam PF12274
Panther DB PTHR34710 PTHR34710:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g18400.1,LOC_Os03g61840.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G427700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G197900 expressed protein -
2 Sobic.006G262900 expressed protein -
3 Sobic.003G116600 syntaxin, putative, expressed K08488: syntaxin 7
4 Sobic.003G374000 ubiquitin-like domain-containing CTD phosphatase 1, putative, expressed K17618: ubiquitin-like domain-containing CTD phosphatase 1
5 Sobic.002G306400 zinc finger family protein, putative, expressed -
6 Sobic.001G294900 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
7 Sobic.008G137600 RNA recognition motif containing protein, expressed K12900: FUS-interacting serine-arginine-rich protein 1
8 Sobic.006G109700 UBA and UBX domain-containing protein, putative, expressed K14012: SHP1, UBX1, UBX domain-containing protein 1
9 Sobic.007G014900 STIP1 homology and U box-containing protein 1, putative, expressed K09561: STUB1, STIP1 homology and U-box containing protein 1
10 Sobic.001G054200 green ripe-like, putative, expressed -
11 Sobic.010G149500 E1-BTB2 - Bric-a-Brac, Tramtrack, and Broad Complex domain with E1 subfamily conserved sequence, expressed -
12 Sobic.001G491100 structural constituent of ribosome, putative, expressed K02911: RP-L32, MRPL32, large subunit ribosomal protein L32
13 Sobic.001G332300 expressed protein -
14 Sobic.002G401700 TRAF-type zinc finger domain-containing protein 1, putative, expressed -
15 Sobic.003G131300 glycosyl hydrolases family 17 protein, putative, expressed -
16 Sobic.001G367000 TRAF-type zinc finger domain-containing protein 1, putative, expressed -
17 Sobic.001G189600 F-box domain containing protein, expressed -
18 Sobic.004G289800 expressed protein -
19 Sobic.001G207500 ZOS10-06 - C2H2 zinc finger protein, expressed K15685: E3 ubiquitin-protein ligase Hakai
20 Sobic.006G231500 acetyltransferase, GNAT family, putative, expressed K00670: NAA30, N-alpha-acetyltransferase 30


Gene co-expression network
sample Sobic002G427700 Sobic002G427700 Sobic010G197900 Sobic010G197900 Sobic002G427700--Sobic010G197900 Sobic006G262900 Sobic006G262900 Sobic002G427700--Sobic006G262900 Sobic003G116600 Sobic003G116600 Sobic002G427700--Sobic003G116600 Sobic003G374000 Sobic003G374000 Sobic002G427700--Sobic003G374000 Sobic002G306400 Sobic002G306400 Sobic002G427700--Sobic002G306400 Sobic001G294900 Sobic001G294900 Sobic002G427700--Sobic001G294900 Sobic008G137600 Sobic008G137600 Sobic002G427700--Sobic008G137600 Sobic006G109700 Sobic006G109700 Sobic002G427700--Sobic006G109700 Sobic007G014900 Sobic007G014900 Sobic002G427700--Sobic007G014900 Sobic003G131300 Sobic003G131300 Sobic010G197900--Sobic003G131300 Sobic001G367000 Sobic001G367000 Sobic010G197900--Sobic001G367000 Sobic002G401700 Sobic002G401700 Sobic010G197900--Sobic002G401700 Sobic006G094600 Sobic006G094600 Sobic010G197900--Sobic006G094600 Sobic008G136800 Sobic008G136800 Sobic010G197900--Sobic008G136800 Sobic010G197900--Sobic003G374000 Sobic004G344800 Sobic004G344800 Sobic010G197900--Sobic004G344800 Sobic009G001900 Sobic009G001900 Sobic010G197900--Sobic009G001900 Sobic004G164000 Sobic004G164000 Sobic010G197900--Sobic004G164000 Sobic009G198500 Sobic009G198500 Sobic006G262900--Sobic009G198500 Sobic003G124800 Sobic003G124800 Sobic006G262900--Sobic003G124800 Sobic006G263900 Sobic006G263900 Sobic006G262900--Sobic006G263900 Sobic001G136900 Sobic001G136900 Sobic006G262900--Sobic001G136900 Sobic001G054200 Sobic001G054200 Sobic006G262900--Sobic001G054200 Sobic010G083700 Sobic010G083700 Sobic006G262900--Sobic010G083700 Sobic001G129300 Sobic001G129300 Sobic006G262900--Sobic001G129300 Sobic007G203700 Sobic007G203700 Sobic006G262900--Sobic007G203700 Sobic007G079700 Sobic007G079700 Sobic006G262900--Sobic007G079700 Sobic002G090700 Sobic002G090700 Sobic003G116600--Sobic002G090700 Sobic010G007400 Sobic010G007400 Sobic003G116600--Sobic010G007400 Sobic005G184200 Sobic005G184200 Sobic003G116600--Sobic005G184200 Sobic004G159000 Sobic004G159000 Sobic003G116600--Sobic004G159000 Sobic004G339300 Sobic004G339300 Sobic003G116600--Sobic004G339300 Sobic003G116600--Sobic001G367000 Sobic004G202100 Sobic004G202100 Sobic003G116600--Sobic004G202100 Sobic001G309500 Sobic001G309500 Sobic003G116600--Sobic001G309500 Sobic003G116600--Sobic002G401700 Sobic007G118000 Sobic007G118000 Sobic003G374000--Sobic007G118000 Sobic009G192000 Sobic009G192000 Sobic003G374000--Sobic009G192000 Sobic010G205300 Sobic010G205300 Sobic003G374000--Sobic010G205300 Sobic002G268400 Sobic002G268400 Sobic003G374000--Sobic002G268400 Sobic001G341500 Sobic001G341500 Sobic003G374000--Sobic001G341500 Sobic007G167900 Sobic007G167900 Sobic003G374000--Sobic007G167900 Sobic003G338500 Sobic003G338500 Sobic003G374000--Sobic003G338500 Sobic001G428800 Sobic001G428800 Sobic003G374000--Sobic001G428800 Sobic003G374000--Sobic008G137600 Sobic002G306400--Sobic002G268400 Sobic003G250500 Sobic003G250500 Sobic002G306400--Sobic003G250500 Sobic003G273400 Sobic003G273400 Sobic002G306400--Sobic003G273400 Sobic001G226100 Sobic001G226100 Sobic002G306400--Sobic001G226100 Sobic001G309100 Sobic001G309100 Sobic002G306400--Sobic001G309100 Sobic001G402300 Sobic001G402300 Sobic002G306400--Sobic001G402300 Sobic002G306400--Sobic001G136900 Sobic010G146600 Sobic010G146600 Sobic002G306400--Sobic010G146600 Sobic004G074300 Sobic004G074300 Sobic002G306400--Sobic004G074300 Sobic001G294900--Sobic008G137600 Sobic003G349300 Sobic003G349300 Sobic001G294900--Sobic003G349300 Sobic006G225300 Sobic006G225300 Sobic001G294900--Sobic006G225300 Sobic001G439600 Sobic001G439600 Sobic001G294900--Sobic001G439600 Sobic006G183000 Sobic006G183000 Sobic001G294900--Sobic006G183000 Sobic002G129000 Sobic002G129000 Sobic001G294900--Sobic002G129000 Sobic001G458700 Sobic001G458700 Sobic001G294900--Sobic001G458700 Sobic009G135600 Sobic009G135600 Sobic001G294900--Sobic009G135600 Sobic001G294900--Sobic006G109700 Sobic001G532100 Sobic001G532100 Sobic008G137600--Sobic001G532100 Sobic008G137600--Sobic001G402300 Sobic008G137600--Sobic001G294900 Sobic002G428200 Sobic002G428200 Sobic008G137600--Sobic002G428200 Sobic008G137600--Sobic003G273400 Sobic008G137600--Sobic006G109700 Sobic002G341800 Sobic002G341800 Sobic008G137600--Sobic002G341800 Sobic001G404100 Sobic001G404100 Sobic008G137600--Sobic001G404100 Sobic001G502200 Sobic001G502200 Sobic008G137600--Sobic001G502200 Sobic006G109700--Sobic008G137600 Sobic001G444300 Sobic001G444300 Sobic006G109700--Sobic001G444300 Sobic006G109700--Sobic006G183000 Sobic006G109700--Sobic001G294900 Sobic009G168000 Sobic009G168000 Sobic006G109700--Sobic009G168000 Sobic006G211800 Sobic006G211800 Sobic006G109700--Sobic006G211800 Sobic006G231500 Sobic006G231500 Sobic006G109700--Sobic006G231500 Sobic004G348900 Sobic004G348900 Sobic006G109700--Sobic004G348900 Sobic006G109700--Sobic001G502200 Sobic001G085100 Sobic001G085100 Sobic007G014900--Sobic001G085100 Sobic004G356900 Sobic004G356900 Sobic007G014900--Sobic004G356900 Sobic007G014900--Sobic010G205300 Sobic007G014900--Sobic006G225300 Sobic007G014900--Sobic007G167900 Sobic007G014900--Sobic006G183000 Sobic003G312200 Sobic003G312200 Sobic007G014900--Sobic003G312200 Sobic004G194900 Sobic004G194900 Sobic007G014900--Sobic004G194900 Sobic007G188300 Sobic007G188300 Sobic007G014900--Sobic007G188300
Octagon: transcription factors


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