Gene annotation
Transcriptome id Sobic.010G149500.1
Synonym POB1, Sb10g020060, ATPOB1
Functional annotation E1-BTB2 - Bric-a-Brac, Tramtrack, and Broad Complex domain with E1 subfamily conserved sequence, expressed
UniProt C5Z3I8
Pfam PF07707 PF00651
Panther DB PTHR24412 PTHR24412:SF194
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G61600 : POZ/BTB containin G-protein 1
RAP-DB (Rice) LOC_Os06g31100.1 : E1-BTB2 - Bric-a-Brac, Tramtrack, and Broad Complex domain with E1 subfamily conserved sequence, expressed
MaizeGDB (Corn) Zm00025a042378
Brachypodium PNT75862 , KQK18219 , KQK18218 , PNT73848 , KQJ94306
Barley HORVU7Hr1G080790.9 , HORVU7Hr1G080790.8 , HORVU7Hr1G080790.5 , HORVU7Hr1G080790.4 , HORVU7Hr1G080790.7 , HORVU7Hr1G080790.6 , HORVU7Hr1G080790.1 , HORVU7Hr1G080790.3 , HORVU7Hr1G080790.2 , HORVU7Hr1G080790.11 , HORVU7Hr1G080790.10 , HORVU7Hr1G080790.13 , HORVU7Hr1G080790.12 , HORVU7Hr1G080790.15 , HORVU7Hr1G080790.14 , HORVU7Hr1G080790.17 , HORVU7Hr1G080790.16 , HORVU7Hr1G080770.3 , HORVU7Hr1G080770.2 , HORVU7Hr1G080770.1 , HORVU7Hr1G080770.7 , HORVU7Hr1G080770.6 , HORVU7Hr1G080770.5 , HORVU7Hr1G080770.4 , HORVU7Hr1G080770.8
Wheat TraesCS7B02G239200 , TraesCS7B02G239200 , TraesCS7B02G239200 , TraesCS7B02G239200 , TraesCS7B02G239200 , TraesCS7B02G239200 , TraesCS7B02G239100 , TraesCS7D02G335700 , TraesCS7D02G335700 , TraesCS7D02G335700 , TraesCS7A02G343900 , TraesCS7A02G343900 , TraesCS7A02G343900 , TraesCS7D02G335600 , TraesCS7A02G344000 , TraesCS7A02G344000
Populus -


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cDNA sequences
Sobic.010G149500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G068700 transporter family protein, putative, expressed K15281: solute carrier family 35
2 Sobic.002G303600 -(PubMedID : 29147737)@RIN3, putative, expressed K10636: AMFR, autocrine motility factor receptor
3 Sobic.003G422900 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
4 Sobic.003G200800 vacuolar ATP synthase subunit d, putative, expressed K02146: ATPeV0D, V-type H+-transporting ATPase subunit d
5 Sobic.001G358500 GA20734-PA, putative, expressed -
6 Sobic.001G489700 prenyltransferase, putative, expressed K02257: COX10, ctaB, heme o synthase
7 Sobic.007G189000 WTG1(Ortholog in rice:Wang et al. (2017))(PubMedID : 31659909)@ubiquitin thioesterase otubain-like, putative, expressed K09602: ubiquitin thioesterase protein OTUB1
8 Sobic.003G053800 WD40-like domain containing protein, putative, expressed -
9 Sobic.005G160400 zinc finger, C3HC4 type domain containing protein, expressed K19043: E3 ubiquitin-protein ligase RHF
10 Sobic.004G323700 zinc finger family protein, putative, expressed -
11 Sobic.006G039400 cation efflux family protein, putative, expressed K14696: SLC30A9, solute carrier family 30 (zinc transporter), member 9
12 Sobic.007G167900 signal peptide peptidase domain containing protein, expressed K09598: signal peptide peptidase-like 3
13 Sobic.009G192000 transcription initiation factor IIF beta subunit, putative, expressed K03139: TFIIF2, GTF2F2, transcription initiation factor TFIIF subunit beta
14 Sobic.002G117400 expressed protein -
15 Sobic.001G294900 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
16 Sobic.001G428800 vacuolar sorting protein, putative, expressed -
17 Sobic.010G020400 HEAT repeat family protein, putative, expressed K03456: serine/threonine-protein phosphatase 2A regulatory subunit A
18 Sobic.010G261600 ubiquitin interaction motif family protein, expressed -
19 Sobic.002G268400 expressed protein -
20 Sobic.002G040700 tetratricopeptide repeat, putative, expressed -


Gene co-expression network
sample Sobic010G149500 Sobic010G149500 Sobic010G068700 Sobic010G068700 Sobic010G149500--Sobic010G068700 Sobic002G303600 Sobic002G303600 Sobic010G149500--Sobic002G303600 Sobic003G422900 Sobic003G422900 Sobic010G149500--Sobic003G422900 Sobic003G200800 Sobic003G200800 Sobic010G149500--Sobic003G200800 Sobic001G358500 Sobic001G358500 Sobic010G149500--Sobic001G358500 Sobic001G489700 Sobic001G489700 Sobic010G149500--Sobic001G489700 Sobic007G189000 Sobic007G189000 Sobic010G149500--Sobic007G189000 Sobic003G053800 Sobic003G053800 Sobic010G149500--Sobic003G053800 Sobic005G160400 Sobic005G160400 Sobic010G149500--Sobic005G160400 Sobic004G198600 Sobic004G198600 Sobic010G068700--Sobic004G198600 Sobic002G355800 Sobic002G355800 Sobic010G068700--Sobic002G355800 Sobic009G228000 Sobic009G228000 Sobic010G068700--Sobic009G228000 Sobic007G162100 Sobic007G162100 Sobic010G068700--Sobic007G162100 Sobic003G182300 Sobic003G182300 Sobic010G068700--Sobic003G182300 Sobic001G049400 Sobic001G049400 Sobic010G068700--Sobic001G049400 Sobic006G039400 Sobic006G039400 Sobic010G068700--Sobic006G039400 Sobic001G014200 Sobic001G014200 Sobic010G068700--Sobic001G014200 Sobic006G174850 Sobic006G174850 Sobic010G068700--Sobic006G174850 Sobic010G261600 Sobic010G261600 Sobic002G303600--Sobic010G261600 Sobic004G323700 Sobic004G323700 Sobic002G303600--Sobic004G323700 Sobic004G178200 Sobic004G178200 Sobic002G303600--Sobic004G178200 Sobic006G180000 Sobic006G180000 Sobic002G303600--Sobic006G180000 Sobic007G218000 Sobic007G218000 Sobic002G303600--Sobic007G218000 Sobic004G028100 Sobic004G028100 Sobic002G303600--Sobic004G028100 Sobic002G303600--Sobic003G422900 Sobic009G092400 Sobic009G092400 Sobic002G303600--Sobic009G092400 Sobic004G003401 Sobic004G003401 Sobic002G303600--Sobic004G003401 Sobic010G020400 Sobic010G020400 Sobic003G422900--Sobic010G020400 Sobic003G155900 Sobic003G155900 Sobic003G422900--Sobic003G155900 Sobic003G422900--Sobic002G303600 Sobic009G164000 Sobic009G164000 Sobic003G422900--Sobic009G164000 Sobic009G044800 Sobic009G044800 Sobic003G422900--Sobic009G044800 Sobic001G392300 Sobic001G392300 Sobic003G422900--Sobic001G392300 Sobic004G257100 Sobic004G257100 Sobic003G422900--Sobic004G257100 Sobic002G256200 Sobic002G256200 Sobic003G422900--Sobic002G256200 Sobic008G082500 Sobic008G082500 Sobic003G422900--Sobic008G082500 Sobic005G018800 Sobic005G018800 Sobic003G200800--Sobic005G018800 Sobic007G161200 Sobic007G161200 Sobic003G200800--Sobic007G161200 Sobic008G021200 Sobic008G021200 Sobic003G200800--Sobic008G021200 Sobic004G060100 Sobic004G060100 Sobic003G200800--Sobic004G060100 Sobic001G115700 Sobic001G115700 Sobic003G200800--Sobic001G115700 Sobic009G256000 Sobic009G256000 Sobic003G200800--Sobic009G256000 Sobic004G283600 Sobic004G283600 Sobic003G200800--Sobic004G283600 Sobic001G428800 Sobic001G428800 Sobic003G200800--Sobic001G428800 Sobic004G347600 Sobic004G347600 Sobic003G200800--Sobic004G347600 Sobic001G358500--Sobic001G428800 Sobic010G192600 Sobic010G192600 Sobic001G358500--Sobic010G192600 Sobic008G018500 Sobic008G018500 Sobic001G358500--Sobic008G018500 Sobic008G085700 Sobic008G085700 Sobic001G358500--Sobic008G085700 Sobic001G467100 Sobic001G467100 Sobic001G358500--Sobic001G467100 Sobic001G358500--Sobic003G182300 Sobic001G358500--Sobic006G039400 Sobic001G358500--Sobic001G049400 Sobic001G211900 Sobic001G211900 Sobic001G358500--Sobic001G211900 Sobic008G165000 Sobic008G165000 Sobic001G489700--Sobic008G165000 Sobic002G378200 Sobic002G378200 Sobic001G489700--Sobic002G378200 Sobic001G047400 Sobic001G047400 Sobic001G489700--Sobic001G047400 Sobic001G307900 Sobic001G307900 Sobic001G489700--Sobic001G307900 Sobic004G010900 Sobic004G010900 Sobic001G489700--Sobic004G010900 Sobic009G257200 Sobic009G257200 Sobic001G489700--Sobic009G257200 Sobic006G250900 Sobic006G250900 Sobic001G489700--Sobic006G250900 Sobic002G040700 Sobic002G040700 Sobic001G489700--Sobic002G040700 Sobic002G281300 Sobic002G281300 Sobic001G489700--Sobic002G281300 Sobic007G056500 Sobic007G056500 Sobic007G189000--Sobic007G056500 Sobic007G105900 Sobic007G105900 Sobic007G189000--Sobic007G105900 Sobic009G124700 Sobic009G124700 Sobic007G189000--Sobic009G124700 Sobic001G169600 Sobic001G169600 Sobic007G189000--Sobic001G169600 Sobic001G106100 Sobic001G106100 Sobic007G189000--Sobic001G106100 Sobic002G347000 Sobic002G347000 Sobic007G189000--Sobic002G347000 Sobic006G219000 Sobic006G219000 Sobic007G189000--Sobic006G219000 Sobic009G224000 Sobic009G224000 Sobic007G189000--Sobic009G224000 Sobic009G160600 Sobic009G160600 Sobic007G189000--Sobic009G160600 Sobic001G296900 Sobic001G296900 Sobic003G053800--Sobic001G296900 Sobic002G105200 Sobic002G105200 Sobic003G053800--Sobic002G105200 Sobic010G020300 Sobic010G020300 Sobic003G053800--Sobic010G020300 Sobic001G085100 Sobic001G085100 Sobic003G053800--Sobic001G085100 Sobic001G124200 Sobic001G124200 Sobic003G053800--Sobic001G124200 Sobic001G161900 Sobic001G161900 Sobic003G053800--Sobic001G161900 Sobic010G164000 Sobic010G164000 Sobic003G053800--Sobic010G164000 Sobic008G076800 Sobic008G076800 Sobic003G053800--Sobic008G076800 Sobic003G053800--Sobic002G303600 Sobic005G160400--Sobic009G092400 Sobic007G084100 Sobic007G084100 Sobic005G160400--Sobic007G084100 Sobic010G237900 Sobic010G237900 Sobic005G160400--Sobic010G237900 Sobic010G092300 Sobic010G092300 Sobic005G160400--Sobic010G092300 Sobic005G160400--Sobic002G347000 Sobic001G473600 Sobic001G473600 Sobic005G160400--Sobic001G473600 Sobic010G265300 Sobic010G265300 Sobic005G160400--Sobic010G265300 Sobic006G121300 Sobic006G121300 Sobic005G160400--Sobic006G121300 Sobic001G114500 Sobic001G114500 Sobic005G160400--Sobic001G114500
Octagon: transcription factors


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