Gene annotation
Transcriptome id Sobic.003G001600.1,Sobic.003G001600.2
Synonym
Functional annotation -
UniProt A0A1B6Q0J2 , A0A1B6Q0J4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g46390.1 : ras-related protein, putative, expressed
MaizeGDB (Corn) Zm00025a017157
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G321100 NB-ARC domain containing protein, expressed -
2 Sobic.003G428300 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@OsRR4 type-A response regulator, expressed K14492: two-component response regulator ARR-A family
3 Sobic.003G105000 kinase, pfkB family, putative, expressed -
4 Sobic.003G248300 kinase, pfkB family, putative, expressed K00852: rbsK, ribokinase
5 Sobic.009G016500 expressed protein -
6 Sobic.006G129900 ribosome recycling factor, putative, expressed K02838: frr, MRRF, ribosome recycling factor
7 Sobic.001G347901 - -
8 Sobic.009G113700 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.003G003000 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
10 Sobic.009G119501 - -
11 Sobic.001G129400 ribosomal protein-related, putative, expressed K02970: RP-S21, MRPS21, small subunit ribosomal protein S21
12 Sobic.010G214900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@4-Coumarate-CoA ligase(PubMedID : 22313236)@AMP-binding domain containing protein, expressed K01904: 4-coumarate--CoA ligase
13 Sobic.003G128800 expansin precursor, putative, expressed -
14 Sobic.001G087900 expressed protein -
15 Sobic.010G005300 ribosomal protein L6, putative, expressed K02940: RP-L9e, large subunit ribosomal protein L9e
16 Sobic.009G153700 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@histone deacetylase 8("PubMedID : 26759170,PubMedID : 24597475")@histone deacetylase, putative, expressed -
17 Sobic.009G238900 dehydrogenase, putative, expressed K00031: IDH1, IDH2, isocitrate dehydrogenase
18 Sobic.003G157700 expressed protein -
19 Sobic.001G139001 - -
20 Sobic.002G415000 POEI49 - Pollen Ole e I allergen and extensin family protein precursor, expressed -


Gene co-expression network
sample Sobic003G001600 Sobic003G001600 Sobic002G321100 Sobic002G321100 Sobic003G001600--Sobic002G321100 Sobic003G428300 Sobic003G428300 Sobic003G001600--Sobic003G428300 Sobic003G105000 Sobic003G105000 Sobic003G001600--Sobic003G105000 Sobic003G248300 Sobic003G248300 Sobic003G001600--Sobic003G248300 Sobic009G016500 Sobic009G016500 Sobic003G001600--Sobic009G016500 Sobic006G129900 Sobic006G129900 Sobic003G001600--Sobic006G129900 Sobic001G347901 Sobic001G347901 Sobic003G001600--Sobic001G347901 Sobic009G113700 Sobic009G113700 Sobic003G001600--Sobic009G113700 Sobic003G003000 Sobic003G003000 Sobic003G001600--Sobic003G003000 Sobic009G214800 Sobic009G214800 Sobic002G321100--Sobic009G214800 Sobic010G143000 Sobic010G143000 Sobic002G321100--Sobic010G143000 Sobic005G115400 Sobic005G115400 Sobic002G321100--Sobic005G115400 Sobic010G168000 Sobic010G168000 Sobic002G321100--Sobic010G168000 Sobic005G075500 Sobic005G075500 Sobic002G321100--Sobic005G075500 Sobic008G047200 Sobic008G047200 Sobic002G321100--Sobic008G047200 Sobic001G318100 Sobic001G318100 Sobic002G321100--Sobic001G318100 Sobic010G115900 Sobic010G115900 Sobic002G321100--Sobic010G115900 Sobic008G120132 Sobic008G120132 Sobic002G321100--Sobic008G120132 Sobic003G426200 Sobic003G426200 Sobic003G428300--Sobic003G426200 Sobic008G079800 Sobic008G079800 Sobic003G428300--Sobic008G079800 Sobic004G165300 Sobic004G165300 Sobic003G428300--Sobic004G165300 Sobic006G117100 Sobic006G117100 Sobic003G428300--Sobic006G117100 Sobic007G192000 Sobic007G192000 Sobic003G428300--Sobic007G192000 Sobic003G082700 Sobic003G082700 Sobic003G428300--Sobic003G082700 Sobic002G415000 Sobic002G415000 Sobic003G428300--Sobic002G415000 Sobic003G428300--Sobic003G105000 Sobic002G094600 Sobic002G094600 Sobic003G428300--Sobic002G094600 Sobic001G365200 Sobic001G365200 Sobic003G105000--Sobic001G365200 Sobic004G193500 Sobic004G193500 Sobic003G105000--Sobic004G193500 Sobic005G127200 Sobic005G127200 Sobic003G105000--Sobic005G127200 Sobic003G105000--Sobic003G428300 Sobic010G093300 Sobic010G093300 Sobic003G105000--Sobic010G093300 Sobic003G157700 Sobic003G157700 Sobic003G105000--Sobic003G157700 Sobic003G255600 Sobic003G255600 Sobic003G105000--Sobic003G255600 Sobic010G187500 Sobic010G187500 Sobic003G105000--Sobic010G187500 Sobic002G030650 Sobic002G030650 Sobic003G105000--Sobic002G030650 Sobic003G170300 Sobic003G170300 Sobic003G248300--Sobic003G170300 Sobic002G317600 Sobic002G317600 Sobic003G248300--Sobic002G317600 Sobic003G286200 Sobic003G286200 Sobic003G248300--Sobic003G286200 Sobic005G110526 Sobic005G110526 Sobic003G248300--Sobic005G110526 Sobic003G248300--Sobic006G129900 Sobic001G473400 Sobic001G473400 Sobic003G248300--Sobic001G473400 Sobic006G038200 Sobic006G038200 Sobic003G248300--Sobic006G038200 Sobic007G043600 Sobic007G043600 Sobic003G248300--Sobic007G043600 Sobic010G258000 Sobic010G258000 Sobic003G248300--Sobic010G258000 Sobic009G016500--Sobic001G347901 Sobic002G308300 Sobic002G308300 Sobic009G016500--Sobic002G308300 Sobic001G286200 Sobic001G286200 Sobic009G016500--Sobic001G286200 Sobic009G016500--Sobic001G473400 Sobic001G370700 Sobic001G370700 Sobic009G016500--Sobic001G370700 Sobic010G264300 Sobic010G264300 Sobic009G016500--Sobic010G264300 Sobic009G016500--Sobic010G258000 Sobic002G078300 Sobic002G078300 Sobic009G016500--Sobic002G078300 Sobic008G136800 Sobic008G136800 Sobic009G016500--Sobic008G136800 Sobic005G047000 Sobic005G047000 Sobic006G129900--Sobic005G047000 Sobic004G010700 Sobic004G010700 Sobic006G129900--Sobic004G010700 Sobic005G178300 Sobic005G178300 Sobic006G129900--Sobic005G178300 Sobic006G129900--Sobic010G258000 Sobic007G165300 Sobic007G165300 Sobic006G129900--Sobic007G165300 Sobic004G015300 Sobic004G015300 Sobic006G129900--Sobic004G015300 Sobic006G129900--Sobic003G248300 Sobic001G176900 Sobic001G176900 Sobic006G129900--Sobic001G176900 Sobic006G129900--Sobic005G110526 Sobic004G342400 Sobic004G342400 Sobic001G347901--Sobic004G342400 Sobic001G347901--Sobic002G308300 Sobic001G347901--Sobic009G016500 Sobic009G179100 Sobic009G179100 Sobic001G347901--Sobic009G179100 Sobic001G347901--Sobic001G370700 Sobic009G233400 Sobic009G233400 Sobic001G347901--Sobic009G233400 Sobic002G415500 Sobic002G415500 Sobic001G347901--Sobic002G415500 Sobic009G173500 Sobic009G173500 Sobic001G347901--Sobic009G173500 Sobic001G334300 Sobic001G334300 Sobic001G347901--Sobic001G334300 Sobic006G009000 Sobic006G009000 Sobic009G113700--Sobic006G009000 Sobic003G139000 Sobic003G139000 Sobic009G113700--Sobic003G139000 Sobic006G009100 Sobic006G009100 Sobic009G113700--Sobic006G009100 Sobic001G536500 Sobic001G536500 Sobic009G113700--Sobic001G536500 Sobic004G351500 Sobic004G351500 Sobic009G113700--Sobic004G351500 Sobic002G327100 Sobic002G327100 Sobic009G113700--Sobic002G327100 Sobic006G014000 Sobic006G014000 Sobic009G113700--Sobic006G014000 Sobic001G087900 Sobic001G087900 Sobic009G113700--Sobic001G087900 Sobic006G102650 Sobic006G102650 Sobic009G113700--Sobic006G102650 Sobic001G129400 Sobic001G129400 Sobic003G003000--Sobic001G129400 Sobic001G132900 Sobic001G132900 Sobic003G003000--Sobic001G132900 Sobic006G281200 Sobic006G281200 Sobic003G003000--Sobic006G281200 Sobic010G018000 Sobic010G018000 Sobic003G003000--Sobic010G018000 Sobic001G008800 Sobic001G008800 Sobic003G003000--Sobic001G008800 Sobic004G018400 Sobic004G018400 Sobic003G003000--Sobic004G018400 Sobic002G117200 Sobic002G117200 Sobic003G003000--Sobic002G117200 Sobic010G094800 Sobic010G094800 Sobic003G003000--Sobic010G094800 Sobic005G127100 Sobic005G127100 Sobic003G003000--Sobic005G127100
Octagon: transcription factors


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