Gene annotation
Transcriptome id Sobic.003G034300.1
Synonym Sb03g003100
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
Myb transcription factor, putative, expressed
UniProt C5XLY6
Pfam PF00249
Panther DB PTHR12374 PTHR12374:SF24
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G56840 : myb-like transcription factor family protein
RAP-DB (Rice) LOC_Os01g09640.1 : Myb transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a003384 , Zm00025a035798 , Zm00025a023038
Brachypodium KQK03131
Barley HORVU1Hr1G055900.4 , HORVU1Hr1G055900.5 , HORVU1Hr1G055900.6 , HORVU1Hr1G055900.7 , HORVU3Hr1G019840.6 , HORVU3Hr1G019840.5 , HORVU3Hr1G019840.4 , HORVU3Hr1G019840.3 , HORVU1Hr1G055900.1 , HORVU1Hr1G073940.1 , HORVU1Hr1G073940.2 , HORVU1Hr1G073940.3 , HORVU1Hr1G073940.4 , HORVU1Hr1G073940.5 , HORVU1Hr1G073940.6 , HORVU3Hr1G019480.6 , HORVU3Hr1G019480.5 , HORVU3Hr1G019480.4 , HORVU3Hr1G019480.3 , HORVU3Hr1G019480.2 , HORVU3Hr1G019480.1
Wheat TraesCS1A02G218800 , TraesCS3D02G056100 , TraesCS1D02G220500 , TraesCS3B02G125500 , TraesCS3D02G109100 , TraesCS1B02G232300 , TraesCS1B02G232300 , TraesCS3D02G111100 , TraesCS3A02G109300 , TraesCS3A02G107000 , TraesCS3B02G399300
Populus -


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cDNA sequences
Sobic.003G034300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G413500 expressed protein -
2 Sobic.001G503300 tyrosine protein kinase domain containing protein, putative, expressed -
3 Sobic.001G387600 ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3
4 Sobic.001G351100 LOL3, putative, expressed -
5 Sobic.003G141000 protein phosphatase 2C, putative, expressed K14803: protein phosphatase PTC2/3
6 Sobic.001G162100 WRKY94, expressed -
7 Sobic.003G044200 C2 domain containing protein, putative, expressed -
8 Sobic.001G343900 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
9 Sobic.001G372500 NAD dependent epimerase/dehydratase family protein, putative, expressed K01784: galE, UDP-glucose 4-epimerase
10 Sobic.001G410100 CGMC_MAPKCGMC_2_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
11 Sobic.003G261900 expressed protein -
12 Sobic.001G143000 Phosphatase(PubMedID : 30367619)@BTBA4 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
13 Sobic.003G308700 BTBA2 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
14 Sobic.009G032400 protein phosphatase 2C, putative, expressed K14803: protein phosphatase PTC2/3
15 Sobic.007G044300 similar to Os08g0155400 protein(PubMedID : 29862293)@peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
16 Sobic.005G072200 lipase, putative, expressed -
17 Sobic.008G075400 - -
18 Sobic.001G321500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBX391 - F-box domain containing protein, expressed -
19 Sobic.005G229400 GRAS family transcription factor domain containing protein, expressed -
20 Sobic.006G119800 leucine rich repeat containing protein, expressed -


Gene co-expression network
sample Sobic003G034300 Sobic003G034300 Sobic003G413500 Sobic003G413500 Sobic003G034300--Sobic003G413500 Sobic001G503300 Sobic001G503300 Sobic003G034300--Sobic001G503300 Sobic001G387600 Sobic001G387600 Sobic003G034300--Sobic001G387600 Sobic001G351100 Sobic001G351100 Sobic003G034300--Sobic001G351100 Sobic003G141000 Sobic003G141000 Sobic003G034300--Sobic003G141000 Sobic001G162100 Sobic001G162100 Sobic003G034300--Sobic001G162100 Sobic003G044200 Sobic003G044200 Sobic003G034300--Sobic003G044200 Sobic001G343900 Sobic001G343900 Sobic003G034300--Sobic001G343900 Sobic001G372500 Sobic001G372500 Sobic003G034300--Sobic001G372500 Sobic003G413500--Sobic001G387600 Sobic010G174500 Sobic010G174500 Sobic003G413500--Sobic010G174500 Sobic003G413500--Sobic001G503300 Sobic004G234900 Sobic004G234900 Sobic003G413500--Sobic004G234900 Sobic009G032400 Sobic009G032400 Sobic003G413500--Sobic009G032400 Sobic010G009400 Sobic010G009400 Sobic003G413500--Sobic010G009400 Sobic001G180900 Sobic001G180900 Sobic003G413500--Sobic001G180900 Sobic010G265800 Sobic010G265800 Sobic003G413500--Sobic010G265800 Sobic003G413500--Sobic001G372500 Sobic001G503300--Sobic010G174500 Sobic001G503300--Sobic004G234900 Sobic001G098200 Sobic001G098200 Sobic001G503300--Sobic001G098200 Sobic006G209400 Sobic006G209400 Sobic001G503300--Sobic006G209400 Sobic001G503300--Sobic003G413500 Sobic001G516100 Sobic001G516100 Sobic001G503300--Sobic001G516100 Sobic001G414500 Sobic001G414500 Sobic001G503300--Sobic001G414500 Sobic006G092400 Sobic006G092400 Sobic001G503300--Sobic006G092400 Sobic001G503300--Sobic003G044200 Sobic003G309900 Sobic003G309900 Sobic001G387600--Sobic003G309900 Sobic006G119800 Sobic006G119800 Sobic001G387600--Sobic006G119800 Sobic001G387600--Sobic003G413500 Sobic009G233300 Sobic009G233300 Sobic001G387600--Sobic009G233300 Sobic001G191600 Sobic001G191600 Sobic001G387600--Sobic001G191600 Sobic008G146900 Sobic008G146900 Sobic001G387600--Sobic008G146900 Sobic001G222250 Sobic001G222250 Sobic001G387600--Sobic001G222250 Sobic001G253700 Sobic001G253700 Sobic001G387600--Sobic001G253700 Sobic001G387600--Sobic010G009400 Sobic005G072200 Sobic005G072200 Sobic001G351100--Sobic005G072200 Sobic003G422700 Sobic003G422700 Sobic001G351100--Sobic003G422700 Sobic006G042200 Sobic006G042200 Sobic001G351100--Sobic006G042200 Sobic004G251300 Sobic004G251300 Sobic001G351100--Sobic004G251300 Sobic004G340800 Sobic004G340800 Sobic001G351100--Sobic004G340800 Sobic002G137800 Sobic002G137800 Sobic001G351100--Sobic002G137800 Sobic002G073900 Sobic002G073900 Sobic001G351100--Sobic002G073900 Sobic003G403500 Sobic003G403500 Sobic001G351100--Sobic003G403500 Sobic007G054100 Sobic007G054100 Sobic001G351100--Sobic007G054100 Sobic001G450700 Sobic001G450700 Sobic003G141000--Sobic001G450700 Sobic007G169200 Sobic007G169200 Sobic003G141000--Sobic007G169200 Sobic001G410100 Sobic001G410100 Sobic003G141000--Sobic001G410100 Sobic002G207300 Sobic002G207300 Sobic003G141000--Sobic002G207300 Sobic001G386000 Sobic001G386000 Sobic003G141000--Sobic001G386000 Sobic001G436000 Sobic001G436000 Sobic003G141000--Sobic001G436000 Sobic007G196600 Sobic007G196600 Sobic003G141000--Sobic007G196600 Sobic003G290100 Sobic003G290100 Sobic003G141000--Sobic003G290100 Sobic007G006600 Sobic007G006600 Sobic003G141000--Sobic007G006600 Sobic006G225600 Sobic006G225600 Sobic001G162100--Sobic006G225600 Sobic001G162100--Sobic004G234900 Sobic009G059700 Sobic009G059700 Sobic001G162100--Sobic009G059700 Sobic008G016900 Sobic008G016900 Sobic001G162100--Sobic008G016900 Sobic010G062800 Sobic010G062800 Sobic001G162100--Sobic010G062800 Sobic002G122700 Sobic002G122700 Sobic001G162100--Sobic002G122700 Sobic001G434900 Sobic001G434900 Sobic001G162100--Sobic001G434900 Sobic001G162100--Sobic001G098200 Sobic009G219900 Sobic009G219900 Sobic001G162100--Sobic009G219900 Sobic001G065700 Sobic001G065700 Sobic003G044200--Sobic001G065700 Sobic003G044200--Sobic001G098200 Sobic003G044200--Sobic006G225600 Sobic005G105000 Sobic005G105000 Sobic003G044200--Sobic005G105000 Sobic006G218700 Sobic006G218700 Sobic003G044200--Sobic006G218700 Sobic009G167600 Sobic009G167600 Sobic003G044200--Sobic009G167600 Sobic003G044200--Sobic001G503300 Sobic009G137800 Sobic009G137800 Sobic003G044200--Sobic009G137800 Sobic009G193400 Sobic009G193400 Sobic003G044200--Sobic009G193400 Sobic006G044932 Sobic006G044932 Sobic001G343900--Sobic006G044932 Sobic002G407700 Sobic002G407700 Sobic001G343900--Sobic002G407700 Sobic001G343900--Sobic007G196600 Sobic007G044300 Sobic007G044300 Sobic001G343900--Sobic007G044300 Sobic005G228000 Sobic005G228000 Sobic001G343900--Sobic005G228000 Sobic004G186500 Sobic004G186500 Sobic001G343900--Sobic004G186500 Sobic001G343900--Sobic001G410100 Sobic007G195701 Sobic007G195701 Sobic001G343900--Sobic007G195701 Sobic002G222800 Sobic002G222800 Sobic001G343900--Sobic002G222800 Sobic001G372500--Sobic009G233300 Sobic007G120401 Sobic007G120401 Sobic001G372500--Sobic007G120401 Sobic001G372500--Sobic003G413500 Sobic001G372500--Sobic009G137800 Sobic001G372500--Sobic001G387600 Sobic007G189500 Sobic007G189500 Sobic001G372500--Sobic007G189500 Sobic006G273200 Sobic006G273200 Sobic001G372500--Sobic006G273200 Sobic001G372500--Sobic003G309900 Sobic006G194500 Sobic006G194500 Sobic001G372500--Sobic006G194500
Octagon: transcription factors


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