Gene annotation
Transcriptome id Sobic.003G073300.1
Synonym WSIP1, TPL
Functional annotation expressed protein
UniProt C5XQ08
Pfam -
Panther DB PTHR36478 PTHR36478:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G15750 : Transducin family protein / WD-40 repeat family protein
RAP-DB (Rice) LOC_Os04g52660.2 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G213100 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K00972: UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase
2 Sobic.005G054700 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
3 Sobic.002G250400 3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed K00021: hydroxymethylglutaryl-CoA reductase (NADPH)
4 Sobic.001G516500 expansin precursor, putative, expressed -
5 Sobic.004G247300 cysteine-rich repeat secretory protein precursor, putative, expressed -
6 Sobic.006G262600 expressed protein -
7 Sobic.009G032300 CGMC_GSK.6 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
8 Sobic.003G328800 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
9 Sobic.006G033700 wax synthase isoform 1, putative, expressed -
10 Sobic.003G229400 CGMC_MAPKCMGC_2.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed -
11 Sobic.007G003600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@cytochrome P450, putative, expressed -
12 Sobic.010G160100 - -
13 Sobic.007G191100 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
14 Sobic.006G130501 - -
15 Sobic.006G149101 - -
16 Sobic.003G397300 - -
17 Sobic.004G220300 "Phenylalanine ammonia-lyase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phenylalanine ammonia-lyase, putative, expressed K13064: phenylalanine/tyrosine ammonia-lyase
18 Sobic.001G194000 DEFL6 - Defensin and Defensin-like DEFL family, expressed -
19 Sobic.002G002900 - -
20 Sobic.003G408200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic003G073300 Sobic003G073300 Sobic006G213100 Sobic006G213100 Sobic003G073300--Sobic006G213100 Sobic005G054700 Sobic005G054700 Sobic003G073300--Sobic005G054700 Sobic002G250400 Sobic002G250400 Sobic003G073300--Sobic002G250400 Sobic001G516500 Sobic001G516500 Sobic003G073300--Sobic001G516500 Sobic004G247300 Sobic004G247300 Sobic003G073300--Sobic004G247300 Sobic006G262600 Sobic006G262600 Sobic003G073300--Sobic006G262600 Sobic009G032300 Sobic009G032300 Sobic003G073300--Sobic009G032300 Sobic003G328800 Sobic003G328800 Sobic003G073300--Sobic003G328800 Sobic006G033700 Sobic006G033700 Sobic003G073300--Sobic006G033700 Sobic006G133600 Sobic006G133600 Sobic006G213100--Sobic006G133600 Sobic009G214600 Sobic009G214600 Sobic006G213100--Sobic009G214600 Sobic003G397300 Sobic003G397300 Sobic006G213100--Sobic003G397300 Sobic006G213100--Sobic003G328800 Sobic007G191100 Sobic007G191100 Sobic006G213100--Sobic007G191100 Sobic001G056300 Sobic001G056300 Sobic006G213100--Sobic001G056300 Sobic003G044900 Sobic003G044900 Sobic006G213100--Sobic003G044900 Sobic004G220300 Sobic004G220300 Sobic006G213100--Sobic004G220300 Sobic007G099500 Sobic007G099500 Sobic006G213100--Sobic007G099500 Sobic005G054700--Sobic004G247300 Sobic009G099700 Sobic009G099700 Sobic005G054700--Sobic009G099700 Sobic001G361800 Sobic001G361800 Sobic005G054700--Sobic001G361800 Sobic001G514400 Sobic001G514400 Sobic005G054700--Sobic001G514400 Sobic002G034301 Sobic002G034301 Sobic005G054700--Sobic002G034301 Sobic009G175200 Sobic009G175200 Sobic005G054700--Sobic009G175200 Sobic002G168600 Sobic002G168600 Sobic005G054700--Sobic002G168600 Sobic010G161900 Sobic010G161900 Sobic005G054700--Sobic010G161900 Sobic002G393200 Sobic002G393200 Sobic005G054700--Sobic002G393200 Sobic002G250400--Sobic006G262600 Sobic001G049600 Sobic001G049600 Sobic002G250400--Sobic001G049600 Sobic002G250400--Sobic007G191100 Sobic004G083200 Sobic004G083200 Sobic002G250400--Sobic004G083200 Sobic002G334600 Sobic002G334600 Sobic002G250400--Sobic002G334600 Sobic009G030300 Sobic009G030300 Sobic002G250400--Sobic009G030300 Sobic003G380500 Sobic003G380500 Sobic002G250400--Sobic003G380500 Sobic002G250400--Sobic003G328800 Sobic002G007200 Sobic002G007200 Sobic002G250400--Sobic002G007200 Sobic003G034500 Sobic003G034500 Sobic001G516500--Sobic003G034500 Sobic008G106800 Sobic008G106800 Sobic001G516500--Sobic008G106800 Sobic001G471900 Sobic001G471900 Sobic001G516500--Sobic001G471900 Sobic001G230700 Sobic001G230700 Sobic001G516500--Sobic001G230700 Sobic009G065000 Sobic009G065000 Sobic001G516500--Sobic009G065000 Sobic004G164500 Sobic004G164500 Sobic001G516500--Sobic004G164500 Sobic006G241300 Sobic006G241300 Sobic001G516500--Sobic006G241300 Sobic006G194150 Sobic006G194150 Sobic001G516500--Sobic006G194150 Sobic001G028800 Sobic001G028800 Sobic001G516500--Sobic001G028800 Sobic004G247300--Sobic005G054700 Sobic004G247300--Sobic001G514400 Sobic004G247300--Sobic009G175200 Sobic004G247300--Sobic002G034301 Sobic001G215900 Sobic001G215900 Sobic004G247300--Sobic001G215900 Sobic004G247300--Sobic009G099700 Sobic001G366800 Sobic001G366800 Sobic004G247300--Sobic001G366800 Sobic010G242900 Sobic010G242900 Sobic004G247300--Sobic010G242900 Sobic004G247300--Sobic006G213100 Sobic006G262600--Sobic002G007200 Sobic006G262600--Sobic003G380500 Sobic006G262600--Sobic006G133600 Sobic002G367300 Sobic002G367300 Sobic006G262600--Sobic002G367300 Sobic006G262600--Sobic001G049600 Sobic004G154600 Sobic004G154600 Sobic006G262600--Sobic004G154600 Sobic006G262600--Sobic002G250400 Sobic004G250700 Sobic004G250700 Sobic006G262600--Sobic004G250700 Sobic009G059600 Sobic009G059600 Sobic006G262600--Sobic009G059600 Sobic010G264400 Sobic010G264400 Sobic009G032300--Sobic010G264400 Sobic006G130200 Sobic006G130200 Sobic009G032300--Sobic006G130200 Sobic006G092800 Sobic006G092800 Sobic009G032300--Sobic006G092800 Sobic010G174800 Sobic010G174800 Sobic009G032300--Sobic010G174800 Sobic006G128800 Sobic006G128800 Sobic009G032300--Sobic006G128800 Sobic002G197100 Sobic002G197100 Sobic009G032300--Sobic002G197100 Sobic007G115900 Sobic007G115900 Sobic009G032300--Sobic007G115900 Sobic001G221100 Sobic001G221100 Sobic009G032300--Sobic001G221100 Sobic009G032300--Sobic007G191100 Sobic003G328800--Sobic006G213100 Sobic005G012000 Sobic005G012000 Sobic003G328800--Sobic005G012000 Sobic004G164650 Sobic004G164650 Sobic003G328800--Sobic004G164650 Sobic003G328800--Sobic003G397300 Sobic008G126200 Sobic008G126200 Sobic003G328800--Sobic008G126200 Sobic003G328800--Sobic003G380500 Sobic001G082300 Sobic001G082300 Sobic003G328800--Sobic001G082300 Sobic008G136000 Sobic008G136000 Sobic003G328800--Sobic008G136000 Sobic003G328800--Sobic003G044900 Sobic006G098200 Sobic006G098200 Sobic006G033700--Sobic006G098200 Sobic002G076400 Sobic002G076400 Sobic006G033700--Sobic002G076400 Sobic006G033700--Sobic007G191100 Sobic009G013700 Sobic009G013700 Sobic006G033700--Sobic009G013700 Sobic003G185200 Sobic003G185200 Sobic006G033700--Sobic003G185200 Sobic010G211300 Sobic010G211300 Sobic006G033700--Sobic010G211300 Sobic006G033700--Sobic009G030300 Sobic002G177400 Sobic002G177400 Sobic006G033700--Sobic002G177400 Sobic001G347600 Sobic001G347600 Sobic006G033700--Sobic001G347600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.