Gene annotation
Transcriptome id Sobic.003G104200.1
Synonym Sb03g008720
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
expressed protein
UniProt A0A1B6Q2G8
Pfam -
Panther DB PTHR33472 PTHR33472:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G46630 : -
RAP-DB (Rice) LOC_Os01g01680.1 : expressed protein
MaizeGDB (Corn) Zm00025a023828 , Zm00025a035408
Brachypodium KQK02289
Barley HORVU4Hr1G070900.1 , HORVU3Hr1G001540.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G440400 ABC transporter, ATP-binding protein, putative, expressed -
2 Sobic.001G213400 HD domain containing protein 2, putative, expressed K06950: uncharacterized protein
3 Sobic.004G320300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
4 Sobic.009G198400 protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
5 Sobic.001G396300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Protein CP12-2 (Os)(PubMedID : 27208977)@calvin cycle protein CP12, putative, expressed -
6 Sobic.001G193600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cystathionine gamma-synthase, putative, expressed K01761: methionine-gamma-lyase
7 Sobic.003G149500 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
8 Sobic.007G175701 - -
9 Sobic.007G122300 - -
10 Sobic.003G120400 expressed protein -
11 Sobic.001G130900 expressed protein -
12 Sobic.002G430200 PSF2 - Putative GINS complex subunit, expressed K10733: GINS2, GINS complex subunit 2
13 Sobic.007G093400 - -
14 Sobic.002G387100 X8 domain containing protein, expressed -
15 Sobic.002G320900 patatin-like phospholipase family protein, expressed -
16 Sobic.003G367401 - -
17 Sobic.001G525000 polygalacturonase, putative, expressed -
18 Sobic.001G441800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
19 Sobic.003G368150 - -
20 Sobic.008G131800 zinc knuckle family protein, expressed -


Gene co-expression network
sample Sobic003G104200 Sobic003G104200 Sobic003G440400 Sobic003G440400 Sobic003G104200--Sobic003G440400 Sobic001G213400 Sobic001G213400 Sobic003G104200--Sobic001G213400 Sobic004G320300 Sobic004G320300 Sobic003G104200--Sobic004G320300 Sobic009G198400 Sobic009G198400 Sobic003G104200--Sobic009G198400 Sobic001G396300 Sobic001G396300 Sobic003G104200--Sobic001G396300 Sobic001G193600 Sobic001G193600 Sobic003G104200--Sobic001G193600 Sobic003G149500 Sobic003G149500 Sobic003G104200--Sobic003G149500 Sobic007G175701 Sobic007G175701 Sobic003G104200--Sobic007G175701 Sobic007G122300 Sobic007G122300 Sobic003G104200--Sobic007G122300 Sobic004G008000 Sobic004G008000 Sobic003G440400--Sobic004G008000 Sobic003G179100 Sobic003G179100 Sobic003G440400--Sobic003G179100 Sobic008G131800 Sobic008G131800 Sobic003G440400--Sobic008G131800 Sobic002G430200 Sobic002G430200 Sobic003G440400--Sobic002G430200 Sobic004G239000 Sobic004G239000 Sobic003G440400--Sobic004G239000 Sobic004G330400 Sobic004G330400 Sobic003G440400--Sobic004G330400 Sobic007G111600 Sobic007G111600 Sobic003G440400--Sobic007G111600 Sobic002G284800 Sobic002G284800 Sobic003G440400--Sobic002G284800 Sobic002G387100 Sobic002G387100 Sobic003G440400--Sobic002G387100 Sobic001G213400--Sobic007G122300 Sobic001G213400--Sobic007G175701 Sobic001G130900 Sobic001G130900 Sobic001G213400--Sobic001G130900 Sobic003G368150 Sobic003G368150 Sobic001G213400--Sobic003G368150 Sobic003G367401 Sobic003G367401 Sobic001G213400--Sobic003G367401 Sobic001G213400--Sobic002G430200 Sobic001G213400--Sobic002G387100 Sobic001G213400--Sobic008G131800 Sobic001G213400--Sobic004G239000 Sobic001G200500 Sobic001G200500 Sobic004G320300--Sobic001G200500 Sobic009G031100 Sobic009G031100 Sobic004G320300--Sobic009G031100 Sobic002G156300 Sobic002G156300 Sobic004G320300--Sobic002G156300 Sobic003G109400 Sobic003G109400 Sobic004G320300--Sobic003G109400 Sobic007G001300 Sobic007G001300 Sobic004G320300--Sobic007G001300 Sobic010G224800 Sobic010G224800 Sobic004G320300--Sobic010G224800 Sobic010G114400 Sobic010G114400 Sobic004G320300--Sobic010G114400 Sobic003G201400 Sobic003G201400 Sobic004G320300--Sobic003G201400 Sobic002G206200 Sobic002G206200 Sobic004G320300--Sobic002G206200 Sobic009G198400--Sobic007G175701 Sobic009G198400--Sobic001G130900 Sobic007G093400 Sobic007G093400 Sobic009G198400--Sobic007G093400 Sobic009G198400--Sobic003G367401 Sobic009G198400--Sobic001G213400 Sobic003G065001 Sobic003G065001 Sobic009G198400--Sobic003G065001 Sobic001G115900 Sobic001G115900 Sobic009G198400--Sobic001G115900 Sobic003G120400 Sobic003G120400 Sobic009G198400--Sobic003G120400 Sobic003G126400 Sobic003G126400 Sobic009G198400--Sobic003G126400 Sobic001G396300--Sobic004G320300 Sobic001G186925 Sobic001G186925 Sobic001G396300--Sobic001G186925 Sobic006G065700 Sobic006G065700 Sobic001G396300--Sobic006G065700 Sobic001G441800 Sobic001G441800 Sobic001G396300--Sobic001G441800 Sobic001G396300--Sobic002G387100 Sobic001G396300--Sobic002G430200 Sobic001G004000 Sobic001G004000 Sobic001G396300--Sobic001G004000 Sobic001G525000 Sobic001G525000 Sobic001G396300--Sobic001G525000 Sobic001G396300--Sobic009G198400 Sobic001G193600--Sobic007G111600 Sobic007G116600 Sobic007G116600 Sobic001G193600--Sobic007G116600 Sobic003G099500 Sobic003G099500 Sobic001G193600--Sobic003G099500 Sobic001G193600--Sobic008G131800 Sobic001G460800 Sobic001G460800 Sobic001G193600--Sobic001G460800 Sobic001G193600--Sobic004G239000 Sobic002G004100 Sobic002G004100 Sobic001G193600--Sobic002G004100 Sobic001G193600--Sobic001G525000 Sobic001G193600--Sobic002G430200 Sobic003G149500--Sobic003G065001 Sobic003G149500--Sobic003G367401 Sobic003G149500--Sobic007G093400 Sobic003G149500--Sobic009G198400 Sobic002G320900 Sobic002G320900 Sobic003G149500--Sobic002G320900 Sobic010G201000 Sobic010G201000 Sobic003G149500--Sobic010G201000 Sobic002G210200 Sobic002G210200 Sobic003G149500--Sobic002G210200 Sobic002G284901 Sobic002G284901 Sobic003G149500--Sobic002G284901 Sobic006G069050 Sobic006G069050 Sobic003G149500--Sobic006G069050 Sobic007G175701--Sobic001G130900 Sobic007G175701--Sobic001G213400 Sobic007G175701--Sobic007G093400 Sobic007G175701--Sobic007G122300 Sobic007G175701--Sobic003G367401 Sobic007G175701--Sobic003G120400 Sobic007G175701--Sobic010G201000 Sobic007G175701--Sobic001G525000 Sobic007G175701--Sobic009G198400 Sobic007G122300--Sobic002G430200 Sobic007G122300--Sobic002G387100 Sobic007G122300--Sobic003G368150 Sobic007G122300--Sobic004G239000 Sobic007G122300--Sobic003G099500 Sobic007G122300--Sobic003G367401 Sobic007G122300--Sobic008G131800 Sobic007G122300--Sobic002G284800 Sobic007G122300--Sobic001G441800
Octagon: transcription factors


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