Gene annotation
Transcriptome id Sobic.003G136500.1
Synonym Sb03g011620
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5XHY4
Pfam -
Panther DB PTHR31865 PTHR31865:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G46940 : -
RAP-DB (Rice) LOC_Os01g18220.1 : expressed protein
MaizeGDB (Corn) Zm00025a035171 , Zm00025a055355 , Zm00025a038117 , Zm00025a024211
Brachypodium PNT71876 , KQK07635 , KQK03991
Barley HORVU3Hr1G034020.8 , HORVU3Hr1G034020.4 , HORVU3Hr1G034020.5 , HORVU3Hr1G034020.6 , HORVU3Hr1G034020.2 , HORVU3Hr1G034020.3 , HORVU3Hr1G034020.10 , HORVU3Hr1G034020.7
Wheat TraesCS3B02G199800 , TraesCS3B02G199800 , TraesCS3D02G175600 , TraesCS3A02G166100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G428900 S-domain receptor-like protein kinase, putative, expressed -
2 Sobic.005G143000 expressed protein -
3 Sobic.003G018400 zinc finger, C3HC4 type domain containing protein, expressed -
4 Sobic.002G246950 - -
5 Sobic.004G104400 berberine and berberine like domain containing protein, expressed -
6 Sobic.003G147301 - -
7 Sobic.009G221701 - -
8 Sobic.005G229900 GRAS family transcription factor domain containing protein, expressed -
9 Sobic.007G223900 cytokinin-O-glucosyltransferase 1, putative, expressed -
10 Sobic.002G264700 RNA recognition motif containing protein, putative, expressed -
11 Sobic.001G388900 biotin--protein ligase, putative, expressed K03801: lipoyl(octanoyl) transferase
12 Sobic.003G398900 tetratricopeptide-like helical, putative, expressed -
13 Sobic.003G213600 expressed protein -
14 Sobic.002G060750 - -
15 Sobic.010G217466 - -
16 Sobic.002G411700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
17 Sobic.001G177200 frigida, putative, expressed -
18 Sobic.002G149550 - K03879: NADH-ubiquinone oxidoreductase chain 2
19 Sobic.003G336400 pentatricopeptide, putative, expressed -
20 Sobic.006G102700 expressed protein -


Gene co-expression network
sample Sobic003G136500 Sobic003G136500 Sobic001G428900 Sobic001G428900 Sobic003G136500--Sobic001G428900 Sobic005G143000 Sobic005G143000 Sobic003G136500--Sobic005G143000 Sobic003G018400 Sobic003G018400 Sobic003G136500--Sobic003G018400 Sobic002G246950 Sobic002G246950 Sobic003G136500--Sobic002G246950 Sobic004G104400 Sobic004G104400 Sobic003G136500--Sobic004G104400 Sobic003G147301 Sobic003G147301 Sobic003G136500--Sobic003G147301 Sobic009G221701 Sobic009G221701 Sobic003G136500--Sobic009G221701 Sobic005G229900 Sobic005G229900 Sobic003G136500--Sobic005G229900 Sobic007G223900 Sobic007G223900 Sobic003G136500--Sobic007G223900 Sobic002G264700 Sobic002G264700 Sobic001G428900--Sobic002G264700 Sobic001G428900--Sobic003G018400 Sobic001G428900--Sobic002G246950 Sobic001G428900--Sobic009G221701 Sobic002G149550 Sobic002G149550 Sobic001G428900--Sobic002G149550 Sobic010G217466 Sobic010G217466 Sobic001G428900--Sobic010G217466 Sobic010G173550 Sobic010G173550 Sobic001G428900--Sobic010G173550 Sobic007G070600 Sobic007G070600 Sobic001G428900--Sobic007G070600 Sobic002G171200 Sobic002G171200 Sobic001G428900--Sobic002G171200 Sobic001G177200 Sobic001G177200 Sobic005G143000--Sobic001G177200 Sobic006G116600 Sobic006G116600 Sobic005G143000--Sobic006G116600 Sobic008G175700 Sobic008G175700 Sobic005G143000--Sobic008G175700 Sobic001G378150 Sobic001G378150 Sobic005G143000--Sobic001G378150 Sobic005G143000--Sobic002G246950 Sobic003G336400 Sobic003G336400 Sobic005G143000--Sobic003G336400 Sobic005G143000--Sobic003G018400 Sobic005G143000--Sobic009G221701 Sobic010G258600 Sobic010G258600 Sobic005G143000--Sobic010G258600 Sobic003G018400--Sobic002G246950 Sobic003G018400--Sobic010G217466 Sobic002G060750 Sobic002G060750 Sobic003G018400--Sobic002G060750 Sobic003G018400--Sobic001G378150 Sobic003G018400--Sobic002G149550 Sobic003G018400--Sobic009G221701 Sobic002G285950 Sobic002G285950 Sobic003G018400--Sobic002G285950 Sobic002G411700 Sobic002G411700 Sobic003G018400--Sobic002G411700 Sobic003G018400--Sobic002G264700 Sobic002G246950--Sobic002G060750 Sobic003G398900 Sobic003G398900 Sobic002G246950--Sobic003G398900 Sobic002G246950--Sobic003G018400 Sobic003G303800 Sobic003G303800 Sobic002G246950--Sobic003G303800 Sobic002G246950--Sobic001G378150 Sobic002G246950--Sobic002G411700 Sobic002G246950--Sobic002G285950 Sobic002G246950--Sobic002G149550 Sobic007G094000 Sobic007G094000 Sobic002G246950--Sobic007G094000 Sobic004G104400--Sobic003G136500 Sobic008G049300 Sobic008G049300 Sobic004G104400--Sobic008G049300 Sobic006G007450 Sobic006G007450 Sobic004G104400--Sobic006G007450 SobicK010100 SobicK010100 Sobic004G104400--SobicK010100 Sobic010G219800 Sobic010G219800 Sobic004G104400--Sobic010G219800 Sobic005G060400 Sobic005G060400 Sobic004G104400--Sobic005G060400 Sobic006G186100 Sobic006G186100 Sobic004G104400--Sobic006G186100 Sobic004G109100 Sobic004G109100 Sobic004G104400--Sobic004G109100 Sobic001G436500 Sobic001G436500 Sobic004G104400--Sobic001G436500 Sobic001G280300 Sobic001G280300 Sobic003G147301--Sobic001G280300 Sobic003G147301--Sobic003G018400 Sobic006G165650 Sobic006G165650 Sobic003G147301--Sobic006G165650 Sobic003G147301--Sobic003G136500 Sobic004G060000 Sobic004G060000 Sobic003G147301--Sobic004G060000 Sobic007G157800 Sobic007G157800 Sobic003G147301--Sobic007G157800 Sobic004G138400 Sobic004G138400 Sobic003G147301--Sobic004G138400 Sobic002G326400 Sobic002G326400 Sobic003G147301--Sobic002G326400 Sobic003G147301--Sobic005G143000 Sobic009G221701--Sobic010G217466 Sobic009G221701--Sobic002G149550 Sobic006G242600 Sobic006G242600 Sobic009G221701--Sobic006G242600 Sobic002G429200 Sobic002G429200 Sobic009G221701--Sobic002G429200 Sobic003G396400 Sobic003G396400 Sobic009G221701--Sobic003G396400 Sobic005G106800 Sobic005G106800 Sobic009G221701--Sobic005G106800 Sobic003G299400 Sobic003G299400 Sobic009G221701--Sobic003G299400 Sobic009G221701--Sobic002G285950 Sobic009G221701--Sobic006G116600 Sobic004G106500 Sobic004G106500 Sobic005G229900--Sobic004G106500 Sobic003G324800 Sobic003G324800 Sobic005G229900--Sobic003G324800 Sobic006G102700 Sobic006G102700 Sobic005G229900--Sobic006G102700 Sobic005G229900--Sobic003G136500 Sobic008G137300 Sobic008G137300 Sobic005G229900--Sobic008G137300 Sobic001G094800 Sobic001G094800 Sobic005G229900--Sobic001G094800 Sobic009G092300 Sobic009G092300 Sobic005G229900--Sobic009G092300 Sobic001G144700 Sobic001G144700 Sobic005G229900--Sobic001G144700 Sobic003G212300 Sobic003G212300 Sobic005G229900--Sobic003G212300 Sobic003G213600 Sobic003G213600 Sobic007G223900--Sobic003G213600 Sobic010G045200 Sobic010G045200 Sobic007G223900--Sobic010G045200 Sobic003G337100 Sobic003G337100 Sobic007G223900--Sobic003G337100 Sobic009G134450 Sobic009G134450 Sobic007G223900--Sobic009G134450 Sobic001G388900 Sobic001G388900 Sobic007G223900--Sobic001G388900 Sobic007G207300 Sobic007G207300 Sobic007G223900--Sobic007G207300 Sobic009G244000 Sobic009G244000 Sobic007G223900--Sobic009G244000 Sobic003G085800 Sobic003G085800 Sobic007G223900--Sobic003G085800 Sobic007G223900--Sobic009G221701
Octagon: transcription factors


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