Gene annotation
Transcriptome id Sobic.003G147301.1
Synonym -
Functional annotation -
UniProt A0A1W0VXF7
Pfam PF13639
Panther DB PTHR14155 PTHR14155:SF107
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT3G16720 : TOXICOS EN LEVADURA 2
RAP-DB (Rice) LOC_Os01g20910.1 : zinc finger, C3HC4 type domain containing protein, expressed
MaizeGDB (Corn) Zm00025a036081 , Zm00025a024323
Brachypodium -
Barley HORVU7Hr1G107430.1 , HORVU3Hr1G015780.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G280300 receptor-like protein kinase, putative, expressed -
2 Sobic.003G018400 zinc finger, C3HC4 type domain containing protein, expressed -
3 Sobic.006G165650 - -
4 Sobic.003G136500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.004G060000 DUF630/DUF632 domains containing protein, putative, expressed -
6 Sobic.007G157800 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@Gibberellin receptor GID1L2("PubMedID : 26759170,PubMedID : 24597475")@gibberellin receptor GID1L2, putative, expressed -
7 Sobic.004G138400 WRKY51, expressed -
8 Sobic.002G326400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lh.9 - DUF26 kinases have homology to DUF26 containing loci, expressed -
9 Sobic.005G143000 expressed protein -
10 Sobic.003G213600 expressed protein -
11 Sobic.001G276500 photosystem II 44 kDa reaction center protein, putative, expressed K02705: photosystem II CP43 chlorophyll apoprotein
12 Sobic.001G177200 frigida, putative, expressed -
13 Sobic.007G223900 cytokinin-O-glucosyltransferase 1, putative, expressed -
14 Sobic.002G002400 Protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
15 Sobic.007G207300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@calvin cycle protein CP12, putative, expressed -
16 Sobic.008G086401 - -
17 Sobic.008G175700 RING-H2 finger protein ATL5D, putative, expressed -
18 Sobic.001G428900 S-domain receptor-like protein kinase, putative, expressed -
19 Sobic.010G084900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@protein kinase family protein, putative, expressed -
20 Sobic.005G165900 zinc finger, C3HC4 type domain containing protein, expressed -


Gene co-expression network
sample Sobic003G147301 Sobic003G147301 Sobic001G280300 Sobic001G280300 Sobic003G147301--Sobic001G280300 Sobic003G018400 Sobic003G018400 Sobic003G147301--Sobic003G018400 Sobic006G165650 Sobic006G165650 Sobic003G147301--Sobic006G165650 Sobic003G136500 Sobic003G136500 Sobic003G147301--Sobic003G136500 Sobic004G060000 Sobic004G060000 Sobic003G147301--Sobic004G060000 Sobic007G157800 Sobic007G157800 Sobic003G147301--Sobic007G157800 Sobic004G138400 Sobic004G138400 Sobic003G147301--Sobic004G138400 Sobic002G326400 Sobic002G326400 Sobic003G147301--Sobic002G326400 Sobic005G143000 Sobic005G143000 Sobic003G147301--Sobic005G143000 Sobic002G041900 Sobic002G041900 Sobic001G280300--Sobic002G041900 Sobic007G179200 Sobic007G179200 Sobic001G280300--Sobic007G179200 Sobic008G040800 Sobic008G040800 Sobic001G280300--Sobic008G040800 Sobic001G431600 Sobic001G431600 Sobic001G280300--Sobic001G431600 Sobic006G112000 Sobic006G112000 Sobic001G280300--Sobic006G112000 Sobic009G209150 Sobic009G209150 Sobic001G280300--Sobic009G209150 Sobic010G265400 Sobic010G265400 Sobic001G280300--Sobic010G265400 Sobic006G052250 Sobic006G052250 Sobic001G280300--Sobic006G052250 Sobic005G060400 Sobic005G060400 Sobic001G280300--Sobic005G060400 Sobic002G246950 Sobic002G246950 Sobic003G018400--Sobic002G246950 Sobic010G217466 Sobic010G217466 Sobic003G018400--Sobic010G217466 Sobic002G060750 Sobic002G060750 Sobic003G018400--Sobic002G060750 Sobic001G378150 Sobic001G378150 Sobic003G018400--Sobic001G378150 Sobic002G149550 Sobic002G149550 Sobic003G018400--Sobic002G149550 Sobic009G221701 Sobic009G221701 Sobic003G018400--Sobic009G221701 Sobic002G285950 Sobic002G285950 Sobic003G018400--Sobic002G285950 Sobic002G411700 Sobic002G411700 Sobic003G018400--Sobic002G411700 Sobic002G264700 Sobic002G264700 Sobic003G018400--Sobic002G264700 Sobic006G165650--Sobic007G157800 Sobic002G040500 Sobic002G040500 Sobic006G165650--Sobic002G040500 Sobic009G206400 Sobic009G206400 Sobic006G165650--Sobic009G206400 Sobic007G207300 Sobic007G207300 Sobic006G165650--Sobic007G207300 Sobic008G175700 Sobic008G175700 Sobic006G165650--Sobic008G175700 Sobic002G175550 Sobic002G175550 Sobic006G165650--Sobic002G175550 Sobic001G177200 Sobic001G177200 Sobic006G165650--Sobic001G177200 Sobic005G097700 Sobic005G097700 Sobic006G165650--Sobic005G097700 Sobic001G256900 Sobic001G256900 Sobic006G165650--Sobic001G256900 Sobic001G428900 Sobic001G428900 Sobic003G136500--Sobic001G428900 Sobic003G136500--Sobic005G143000 Sobic003G136500--Sobic003G018400 Sobic003G136500--Sobic002G246950 Sobic004G104400 Sobic004G104400 Sobic003G136500--Sobic004G104400 Sobic003G136500--Sobic003G147301 Sobic003G136500--Sobic009G221701 Sobic005G229900 Sobic005G229900 Sobic003G136500--Sobic005G229900 Sobic007G223900 Sobic007G223900 Sobic003G136500--Sobic007G223900 Sobic007G044350 Sobic007G044350 Sobic004G060000--Sobic007G044350 Sobic001G278400 Sobic001G278400 Sobic004G060000--Sobic001G278400 Sobic006G233200 Sobic006G233200 Sobic004G060000--Sobic006G233200 Sobic001G036400 Sobic001G036400 Sobic004G060000--Sobic001G036400 Sobic004G060000--Sobic002G411700 Sobic001G378900 Sobic001G378900 Sobic004G060000--Sobic001G378900 Sobic006G116600 Sobic006G116600 Sobic004G060000--Sobic006G116600 Sobic001G276500 Sobic001G276500 Sobic004G060000--Sobic001G276500 Sobic001G104050 Sobic001G104050 Sobic004G060000--Sobic001G104050 Sobic007G157800--Sobic006G165650 Sobic007G157800--Sobic007G207300 Sobic007G070600 Sobic007G070600 Sobic007G157800--Sobic007G070600 Sobic007G157800--Sobic001G256900 Sobic007G157800--Sobic005G097700 Sobic007G157800--Sobic002G175550 Sobic007G157800--Sobic001G177200 Sobic007G157800--Sobic002G040500 Sobic003G336400 Sobic003G336400 Sobic007G157800--Sobic003G336400 Sobic003G325100 Sobic003G325100 Sobic004G138400--Sobic003G325100 Sobic009G111800 Sobic009G111800 Sobic004G138400--Sobic009G111800 Sobic001G330925 Sobic001G330925 Sobic004G138400--Sobic001G330925 Sobic002G202800 Sobic002G202800 Sobic004G138400--Sobic002G202800 Sobic004G106200 Sobic004G106200 Sobic004G138400--Sobic004G106200 Sobic004G109100 Sobic004G109100 Sobic004G138400--Sobic004G109100 Sobic003G242800 Sobic003G242800 Sobic004G138400--Sobic003G242800 Sobic001G321700 Sobic001G321700 Sobic004G138400--Sobic001G321700 Sobic001G476100 Sobic001G476100 Sobic004G138400--Sobic001G476100 Sobic002G342700 Sobic002G342700 Sobic002G326400--Sobic002G342700 Sobic001G148800 Sobic001G148800 Sobic002G326400--Sobic001G148800 Sobic007G078900 Sobic007G078900 Sobic002G326400--Sobic007G078900 Sobic009G109600 Sobic009G109600 Sobic002G326400--Sobic009G109600 Sobic002G109700 Sobic002G109700 Sobic002G326400--Sobic002G109700 Sobic001G372400 Sobic001G372400 Sobic002G326400--Sobic001G372400 Sobic002G326400--Sobic006G052250 Sobic002G326400--Sobic001G276500 Sobic002G326400--Sobic006G233200 Sobic005G143000--Sobic001G177200 Sobic005G143000--Sobic006G116600 Sobic005G143000--Sobic008G175700 Sobic005G143000--Sobic001G378150 Sobic005G143000--Sobic002G246950 Sobic005G143000--Sobic003G336400 Sobic005G143000--Sobic003G018400 Sobic005G143000--Sobic009G221701 Sobic010G258600 Sobic010G258600 Sobic005G143000--Sobic010G258600
Octagon: transcription factors


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