Gene annotation
Transcriptome id Sobic.005G229900.1
Synonym GRAS2, SCL14, ATGRAS2
Functional annotation GRAS family transcription factor domain containing protein, expressed
UniProt A0A1Z5RKL0
Pfam PF03514
Panther DB PTHR31636 PTHR31636:SF41
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G07530 : SCARECROW-like 14
RAP-DB (Rice) LOC_Os11g47890.1 : GRAS family transcription factor domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK10137
Barley HORVU4Hr1G027920.2 , HORVU4Hr1G027920.3 , HORVU4Hr1G027920.1 , HORVU4Hr1G027920.6 , HORVU4Hr1G027920.4 , HORVU4Hr1G027920.5 , HORVU5Hr1G063270.3 , HORVU5Hr1G063270.2 , HORVU5Hr1G063270.1
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G106500 hydroquinone glucosyltransferase, putative, expressed -
2 Sobic.003G324800 expressed protein -
3 Sobic.006G102700 expressed protein -
4 Sobic.003G136500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.008G137300 RALFL43 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
6 Sobic.001G094800 similar to IAA1 protein(PubMedID : 29862293)@"domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA13 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
7 Sobic.009G092300 expressed protein -
8 Sobic.001G144700 LTPL71 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.003G212300 mitochondrial chaperone BCS1, putative, expressed -
10 Sobic.003G315166 - K13024: PPIP5K, inositol-hexakisphosphate/diphosphoinositol-pentakisphosphate 1-kinase
11 Sobic.010G079300 aspartic proteinase nepenthesin-1 precursor, putative, expressed -
12 Sobic.004G178600 OsFBX1 - F-box domain containing protein, expressed -
13 Sobic.004G037100 cycloartenol synthase, putative, expressed K01853: cycloartenol synthase
14 Sobic.004G341600 O-methyltransferase, putative, expressed -
15 Sobic.002G334100 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
16 Sobic.006G008100 expressed protein -
17 Sobic.004G163400 PAN domain-containing protein At5g03700 precursor, putative, expressed -
18 Sobic.007G055900 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
19 Sobic.001G498100 OsSub27 - Putative Subtilisin homologue, expressed -
20 Sobic.006G148400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK51 - OsWAK receptor-like protein kinase, expressed -


Gene co-expression network
sample Sobic005G229900 Sobic005G229900 Sobic004G106500 Sobic004G106500 Sobic005G229900--Sobic004G106500 Sobic003G324800 Sobic003G324800 Sobic005G229900--Sobic003G324800 Sobic006G102700 Sobic006G102700 Sobic005G229900--Sobic006G102700 Sobic003G136500 Sobic003G136500 Sobic005G229900--Sobic003G136500 Sobic008G137300 Sobic008G137300 Sobic005G229900--Sobic008G137300 Sobic001G094800 Sobic001G094800 Sobic005G229900--Sobic001G094800 Sobic009G092300 Sobic009G092300 Sobic005G229900--Sobic009G092300 Sobic001G144700 Sobic001G144700 Sobic005G229900--Sobic001G144700 Sobic003G212300 Sobic003G212300 Sobic005G229900--Sobic003G212300 Sobic008G019900 Sobic008G019900 Sobic004G106500--Sobic008G019900 Sobic004G187600 Sobic004G187600 Sobic004G106500--Sobic004G187600 Sobic008G078800 Sobic008G078800 Sobic004G106500--Sobic008G078800 Sobic002G325500 Sobic002G325500 Sobic004G106500--Sobic002G325500 Sobic004G037100 Sobic004G037100 Sobic004G106500--Sobic004G037100 Sobic004G046400 Sobic004G046400 Sobic004G106500--Sobic004G046400 Sobic002G165020 Sobic002G165020 Sobic004G106500--Sobic002G165020 Sobic006G266800 Sobic006G266800 Sobic004G106500--Sobic006G266800 Sobic007G005100 Sobic007G005100 Sobic004G106500--Sobic007G005100 Sobic005G123300 Sobic005G123300 Sobic003G324800--Sobic005G123300 Sobic005G104850 Sobic005G104850 Sobic003G324800--Sobic005G104850 Sobic004G291300 Sobic004G291300 Sobic003G324800--Sobic004G291300 Sobic001G502801 Sobic001G502801 Sobic003G324800--Sobic001G502801 Sobic005G020501 Sobic005G020501 Sobic003G324800--Sobic005G020501 Sobic002G312550 Sobic002G312550 Sobic003G324800--Sobic002G312550 Sobic009G170050 Sobic009G170050 Sobic003G324800--Sobic009G170050 Sobic010G214150 Sobic010G214150 Sobic003G324800--Sobic010G214150 Sobic009G143750 Sobic009G143750 Sobic003G324800--Sobic009G143750 Sobic009G244000 Sobic009G244000 Sobic006G102700--Sobic009G244000 Sobic009G116766 Sobic009G116766 Sobic006G102700--Sobic009G116766 Sobic005G231201 Sobic005G231201 Sobic006G102700--Sobic005G231201 Sobic010G045200 Sobic010G045200 Sobic006G102700--Sobic010G045200 Sobic010G120400 Sobic010G120400 Sobic006G102700--Sobic010G120400 Sobic003G292800 Sobic003G292800 Sobic006G102700--Sobic003G292800 Sobic007G224800 Sobic007G224800 Sobic006G102700--Sobic007G224800 Sobic003G201300 Sobic003G201300 Sobic006G102700--Sobic003G201300 Sobic008G127600 Sobic008G127600 Sobic006G102700--Sobic008G127600 Sobic001G428900 Sobic001G428900 Sobic003G136500--Sobic001G428900 Sobic005G143000 Sobic005G143000 Sobic003G136500--Sobic005G143000 Sobic003G018400 Sobic003G018400 Sobic003G136500--Sobic003G018400 Sobic002G246950 Sobic002G246950 Sobic003G136500--Sobic002G246950 Sobic004G104400 Sobic004G104400 Sobic003G136500--Sobic004G104400 Sobic003G147301 Sobic003G147301 Sobic003G136500--Sobic003G147301 Sobic009G221701 Sobic009G221701 Sobic003G136500--Sobic009G221701 Sobic003G136500--Sobic005G229900 Sobic007G223900 Sobic007G223900 Sobic003G136500--Sobic007G223900 Sobic002G281100 Sobic002G281100 Sobic008G137300--Sobic002G281100 Sobic009G183800 Sobic009G183800 Sobic008G137300--Sobic009G183800 Sobic010G083400 Sobic010G083400 Sobic008G137300--Sobic010G083400 Sobic002G334200 Sobic002G334200 Sobic008G137300--Sobic002G334200 Sobic003G390500 Sobic003G390500 Sobic008G137300--Sobic003G390500 Sobic002G356500 Sobic002G356500 Sobic008G137300--Sobic002G356500 Sobic008G137300--Sobic001G094800 Sobic002G391800 Sobic002G391800 Sobic008G137300--Sobic002G391800 Sobic010G128400 Sobic010G128400 Sobic008G137300--Sobic010G128400 Sobic001G094800--Sobic008G137300 Sobic002G218800 Sobic002G218800 Sobic001G094800--Sobic002G218800 Sobic004G348500 Sobic004G348500 Sobic001G094800--Sobic004G348500 Sobic001G094800--Sobic003G390500 Sobic001G094800--Sobic002G356500 Sobic001G094800--Sobic004G046400 Sobic001G094800--Sobic003G212300 Sobic004G089100 Sobic004G089100 Sobic001G094800--Sobic004G089100 Sobic003G121100 Sobic003G121100 Sobic001G094800--Sobic003G121100 Sobic010G180550 Sobic010G180550 Sobic009G092300--Sobic010G180550 Sobic007G126150 Sobic007G126150 Sobic009G092300--Sobic007G126150 Sobic001G487900 Sobic001G487900 Sobic009G092300--Sobic001G487900 Sobic009G092300--Sobic009G143750 Sobic007G207100 Sobic007G207100 Sobic009G092300--Sobic007G207100 Sobic004G210400 Sobic004G210400 Sobic009G092300--Sobic004G210400 Sobic003G369566 Sobic003G369566 Sobic009G092300--Sobic003G369566 Sobic002G150200 Sobic002G150200 Sobic009G092300--Sobic002G150200 Sobic001G075500 Sobic001G075500 Sobic009G092300--Sobic001G075500 Sobic001G413700 Sobic001G413700 Sobic001G144700--Sobic001G413700 Sobic003G151900 Sobic003G151900 Sobic001G144700--Sobic003G151900 Sobic001G038400 Sobic001G038400 Sobic001G144700--Sobic001G038400 Sobic007G154200 Sobic007G154200 Sobic001G144700--Sobic007G154200 Sobic010G260600 Sobic010G260600 Sobic001G144700--Sobic010G260600 Sobic002G409000 Sobic002G409000 Sobic001G144700--Sobic002G409000 Sobic002G050100 Sobic002G050100 Sobic001G144700--Sobic002G050100 Sobic009G008800 Sobic009G008800 Sobic001G144700--Sobic009G008800 Sobic001G068500 Sobic001G068500 Sobic001G144700--Sobic001G068500 Sobic007G108700 Sobic007G108700 Sobic003G212300--Sobic007G108700 Sobic003G212300--Sobic004G046400 Sobic005G096600 Sobic005G096600 Sobic003G212300--Sobic005G096600 Sobic003G024900 Sobic003G024900 Sobic003G212300--Sobic003G024900 Sobic003G212300--Sobic002G356500 Sobic004G163400 Sobic004G163400 Sobic003G212300--Sobic004G163400 Sobic001G021900 Sobic001G021900 Sobic003G212300--Sobic001G021900 Sobic002G235500 Sobic002G235500 Sobic003G212300--Sobic002G235500 Sobic002G042100 Sobic002G042100 Sobic003G212300--Sobic002G042100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.