Gene annotation
Transcriptome id Sobic.003G193300.1
Synonym
Functional annotation -
UniProt A0A1B6Q4B3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G070300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
2 Sobic.005G099400 ubiquitin family protein, putative, expressed -
3 Sobic.001G264500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
4 Sobic.003G164300 cullin, putative, expressed K03347: CUL1, cullin 1
5 Sobic.001G135900 transferase family protein, putative, expressed -
6 Sobic.004G022366 - -
7 Sobic.002G189800 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.005G201400 OsFBX222 - F-box domain containing protein, expressed -
9 Sobic.002G213100 zinc finger, C3HC4 type family protein, expressed -
10 Sobic.005G125400 C4-dicarboxylate transporter/malic acid transport protein, expressed -
11 Sobic.004G240250 - -
12 Sobic.006G067300 OsFBX103 - F-box domain containing protein, expressed -
13 Sobic.006G256400 expressed protein -
14 Sobic.003G212700 expressed protein -
15 Sobic.010G094400 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
16 Sobic.001G162900 zinc finger protein-related, putative, expressed K11968: ariadne-1
17 Sobic.006G172400 expressed protein -
18 Sobic.005G125200 OsFBX313 - F-box domain containing protein, expressed -
19 Sobic.003G090400 seven in absentia protein family protein, expressed -
20 Sobic.007G219300 BURP domain containing protein, expressed -


Gene co-expression network
sample Sobic003G193300 Sobic003G193300 Sobic003G070300 Sobic003G070300 Sobic003G193300--Sobic003G070300 Sobic005G099400 Sobic005G099400 Sobic003G193300--Sobic005G099400 Sobic001G264500 Sobic001G264500 Sobic003G193300--Sobic001G264500 Sobic003G164300 Sobic003G164300 Sobic003G193300--Sobic003G164300 Sobic001G135900 Sobic001G135900 Sobic003G193300--Sobic001G135900 Sobic004G022366 Sobic004G022366 Sobic003G193300--Sobic004G022366 Sobic002G189800 Sobic002G189800 Sobic003G193300--Sobic002G189800 Sobic005G201400 Sobic005G201400 Sobic003G193300--Sobic005G201400 Sobic002G213100 Sobic002G213100 Sobic003G193300--Sobic002G213100 Sobic003G070300--Sobic002G189800 Sobic001G162900 Sobic001G162900 Sobic003G070300--Sobic001G162900 Sobic003G243400 Sobic003G243400 Sobic003G070300--Sobic003G243400 Sobic006G229200 Sobic006G229200 Sobic003G070300--Sobic006G229200 Sobic003G070300--Sobic003G193300 Sobic010G212600 Sobic010G212600 Sobic003G070300--Sobic010G212600 Sobic009G067200 Sobic009G067200 Sobic003G070300--Sobic009G067200 Sobic008G005400 Sobic008G005400 Sobic003G070300--Sobic008G005400 Sobic006G188100 Sobic006G188100 Sobic003G070300--Sobic006G188100 Sobic005G006701 Sobic005G006701 Sobic005G099400--Sobic005G006701 Sobic004G089400 Sobic004G089400 Sobic005G099400--Sobic004G089400 Sobic005G099400--Sobic004G022366 Sobic010G043300 Sobic010G043300 Sobic005G099400--Sobic010G043300 Sobic004G149200 Sobic004G149200 Sobic005G099400--Sobic004G149200 Sobic002G260100 Sobic002G260100 Sobic005G099400--Sobic002G260100 Sobic010G077900 Sobic010G077900 Sobic005G099400--Sobic010G077900 Sobic001G215201 Sobic001G215201 Sobic005G099400--Sobic001G215201 Sobic005G099400--Sobic003G164300 Sobic001G264500--Sobic001G135900 Sobic001G264500--Sobic002G213100 Sobic003G192200 Sobic003G192200 Sobic001G264500--Sobic003G192200 Sobic002G295600 Sobic002G295600 Sobic001G264500--Sobic002G295600 Sobic005G125200 Sobic005G125200 Sobic001G264500--Sobic005G125200 Sobic003G131900 Sobic003G131900 Sobic001G264500--Sobic003G131900 Sobic008G023801 Sobic008G023801 Sobic001G264500--Sobic008G023801 Sobic003G193600 Sobic003G193600 Sobic001G264500--Sobic003G193600 Sobic004G079600 Sobic004G079600 Sobic001G264500--Sobic004G079600 Sobic003G164300--Sobic010G043300 Sobic007G010350 Sobic007G010350 Sobic003G164300--Sobic007G010350 Sobic007G219300 Sobic007G219300 Sobic003G164300--Sobic007G219300 Sobic006G067300 Sobic006G067300 Sobic003G164300--Sobic006G067300 Sobic003G180700 Sobic003G180700 Sobic003G164300--Sobic003G180700 Sobic001G355300 Sobic001G355300 Sobic003G164300--Sobic001G355300 Sobic001G092650 Sobic001G092650 Sobic003G164300--Sobic001G092650 Sobic009G067100 Sobic009G067100 Sobic003G164300--Sobic009G067100 Sobic007G083500 Sobic007G083500 Sobic003G164300--Sobic007G083500 Sobic001G135900--Sobic002G213100 Sobic001G135900--Sobic003G193600 Sobic001G135900--Sobic004G079600 Sobic009G095640 Sobic009G095640 Sobic001G135900--Sobic009G095640 Sobic001G135900--Sobic005G125200 Sobic001G135900--Sobic003G192200 Sobic001G135900--Sobic002G295600 Sobic005G054501 Sobic005G054501 Sobic001G135900--Sobic005G054501 Sobic007G051200 Sobic007G051200 Sobic001G135900--Sobic007G051200 Sobic002G298500 Sobic002G298500 Sobic004G022366--Sobic002G298500 Sobic004G022366--Sobic001G355300 Sobic006G018000 Sobic006G018000 Sobic004G022366--Sobic006G018000 Sobic004G022366--Sobic003G180700 Sobic004G022366--Sobic007G219300 Sobic004G022366--Sobic009G067100 Sobic004G022366--Sobic007G083500 Sobic006G124500 Sobic006G124500 Sobic004G022366--Sobic006G124500 Sobic002G121100 Sobic002G121100 Sobic004G022366--Sobic002G121100 Sobic002G189800--Sobic003G070300 Sobic002G189800--Sobic003G243400 Sobic002G189800--Sobic001G162900 Sobic002G189800--Sobic010G212600 Sobic002G189800--Sobic009G067200 Sobic002G008000 Sobic002G008000 Sobic002G189800--Sobic002G008000 Sobic002G223100 Sobic002G223100 Sobic002G189800--Sobic002G223100 Sobic009G053001 Sobic009G053001 Sobic002G189800--Sobic009G053001 Sobic004G303150 Sobic004G303150 Sobic002G189800--Sobic004G303150 Sobic006G256400 Sobic006G256400 Sobic005G201400--Sobic006G256400 Sobic005G006900 Sobic005G006900 Sobic005G201400--Sobic005G006900 Sobic009G240500 Sobic009G240500 Sobic005G201400--Sobic009G240500 Sobic003G090400 Sobic003G090400 Sobic005G201400--Sobic003G090400 Sobic001G241700 Sobic001G241700 Sobic005G201400--Sobic001G241700 Sobic008G071700 Sobic008G071700 Sobic005G201400--Sobic008G071700 Sobic004G254700 Sobic004G254700 Sobic005G201400--Sobic004G254700 Sobic006G276600 Sobic006G276600 Sobic005G201400--Sobic006G276600 Sobic005G041500 Sobic005G041500 Sobic005G201400--Sobic005G041500 Sobic002G213100--Sobic001G135900 Sobic002G213100--Sobic003G193600 Sobic002G213100--Sobic009G095640 Sobic002G213100--Sobic004G079600 Sobic002G213100--Sobic005G054501 Sobic002G213100--Sobic002G295600 Sobic002G213100--Sobic007G051200 Sobic002G213100--Sobic005G125200 Sobic006G251100 Sobic006G251100 Sobic002G213100--Sobic006G251100
Octagon: transcription factors


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