Gene annotation
Transcriptome id Sobic.003G203800.1,Sobic.003G203800.2
Synonym Sb03g026600
Functional annotation AP2/B3 transcription factor (PubMedID : 27016024)
B3 DNA binding domain containing protein, expressed
UniProt C5XPJ3 , A0A1W0VY64
Pfam PF02362
Panther DB PTHR31391 PTHR31391:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding


Orthologs (automatic annotation)
TAIR AT3G19184 : AP2/B3-like transcriptional factor family protein
RAP-DB (Rice) LOC_Os06g09420.1 : B3 DNA binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a028565
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G058100 FHA domain containing protein, putative, expressed -
2 Sobic.004G063600 CYPRO4, putative, expressed -
3 Sobic.009G136000 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
4 Sobic.003G084100 expressed protein -
5 Sobic.009G131200 expressed protein -
6 Sobic.001G170800 "Transport protein(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659835)@transport protein-related, putative, expressed -
7 Sobic.001G175100 DEK C terminal domain containing protein, expressed -
8 Sobic.009G125800 expressed protein -
9 Sobic.008G070700 leafbladeless1, putative, expressed -
10 Sobic.003G013800 expressed protein -
11 Sobic.006G193100 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
12 Sobic.004G198100 expressed protein -
13 Sobic.006G270500 GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.001G082800 ORC5 - Putative origin recognition complex subunit 5, expressed K02607: origin recognition complex subunit 5
15 Sobic.004G053900 expressed protein -
16 Sobic.003G085900 Glycosyl hydrolase. predicted target of sbi-miR-5568 and sbi-miR-6220 expressed in the stems of sweet sorghum(PubMedID : 26117170)@glycosyl hydrolase, family 31, putative, expressed K15925: alpha-D-xyloside xylohydrolase
17 Sobic.009G138300 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
18 Sobic.001G279400 - -
19 Sobic.010G092400 glycosyl transferase 8 domain containing protein, putative, expressed -
20 Sobic.008G004900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -


Gene co-expression network
sample Sobic003G203800 Sobic003G203800 Sobic009G058100 Sobic009G058100 Sobic003G203800--Sobic009G058100 Sobic004G063600 Sobic004G063600 Sobic003G203800--Sobic004G063600 Sobic009G136000 Sobic009G136000 Sobic003G203800--Sobic009G136000 Sobic003G084100 Sobic003G084100 Sobic003G203800--Sobic003G084100 Sobic009G131200 Sobic009G131200 Sobic003G203800--Sobic009G131200 Sobic001G170800 Sobic001G170800 Sobic003G203800--Sobic001G170800 Sobic001G175100 Sobic001G175100 Sobic003G203800--Sobic001G175100 Sobic009G125800 Sobic009G125800 Sobic003G203800--Sobic009G125800 Sobic008G070700 Sobic008G070700 Sobic003G203800--Sobic008G070700 Sobic009G058100--Sobic004G063600 Sobic009G058100--Sobic009G136000 Sobic001G082800 Sobic001G082800 Sobic009G058100--Sobic001G082800 Sobic009G058100--Sobic009G125800 Sobic008G148000 Sobic008G148000 Sobic009G058100--Sobic008G148000 Sobic009G058100--Sobic009G131200 Sobic002G204400 Sobic002G204400 Sobic009G058100--Sobic002G204400 Sobic009G058100--Sobic001G170800 Sobic004G198100 Sobic004G198100 Sobic009G058100--Sobic004G198100 Sobic004G063600--Sobic009G058100 Sobic003G260700 Sobic003G260700 Sobic004G063600--Sobic003G260700 Sobic004G063600--Sobic002G204400 Sobic004G063600--Sobic003G084100 Sobic010G105400 Sobic010G105400 Sobic004G063600--Sobic010G105400 Sobic004G063600--Sobic009G131200 Sobic004G063600--Sobic004G198100 Sobic001G398400 Sobic001G398400 Sobic004G063600--Sobic001G398400 Sobic001G091500 Sobic001G091500 Sobic004G063600--Sobic001G091500 Sobic010G038200 Sobic010G038200 Sobic009G136000--Sobic010G038200 Sobic009G136000--Sobic001G082800 Sobic009G136000--Sobic009G125800 Sobic008G131900 Sobic008G131900 Sobic009G136000--Sobic008G131900 Sobic010G030000 Sobic010G030000 Sobic009G136000--Sobic010G030000 Sobic006G193100 Sobic006G193100 Sobic009G136000--Sobic006G193100 Sobic002G390800 Sobic002G390800 Sobic009G136000--Sobic002G390800 Sobic009G136000--Sobic009G131200 Sobic002G052800 Sobic002G052800 Sobic009G136000--Sobic002G052800 Sobic008G125700 Sobic008G125700 Sobic003G084100--Sobic008G125700 Sobic003G084100--Sobic004G063600 Sobic003G084100--Sobic001G091500 Sobic004G237000 Sobic004G237000 Sobic003G084100--Sobic004G237000 Sobic001G393200 Sobic001G393200 Sobic003G084100--Sobic001G393200 Sobic010G119300 Sobic010G119300 Sobic003G084100--Sobic010G119300 Sobic008G114900 Sobic008G114900 Sobic003G084100--Sobic008G114900 Sobic003G010700 Sobic003G010700 Sobic003G084100--Sobic003G010700 Sobic001G496400 Sobic001G496400 Sobic003G084100--Sobic001G496400 Sobic009G131200--Sobic009G125800 Sobic008G004900 Sobic008G004900 Sobic009G131200--Sobic008G004900 Sobic009G131200--Sobic001G082800 Sobic009G131200--Sobic009G136000 Sobic009G131200--Sobic004G063600 Sobic004G117400 Sobic004G117400 Sobic009G131200--Sobic004G117400 Sobic009G131200--Sobic009G058100 Sobic001G069700 Sobic001G069700 Sobic009G131200--Sobic001G069700 Sobic010G009700 Sobic010G009700 Sobic009G131200--Sobic010G009700 Sobic005G000500 Sobic005G000500 Sobic001G170800--Sobic005G000500 Sobic001G170800--Sobic003G260700 Sobic003G444100 Sobic003G444100 Sobic001G170800--Sobic003G444100 Sobic001G170800--Sobic001G398400 Sobic004G271300 Sobic004G271300 Sobic001G170800--Sobic004G271300 Sobic001G170800--Sobic008G148000 Sobic010G008900 Sobic010G008900 Sobic001G170800--Sobic010G008900 Sobic001G177900 Sobic001G177900 Sobic001G170800--Sobic001G177900 Sobic004G339500 Sobic004G339500 Sobic001G170800--Sobic004G339500 Sobic001G175100--Sobic008G070700 Sobic004G003700 Sobic004G003700 Sobic001G175100--Sobic004G003700 Sobic001G175100--Sobic004G198100 Sobic006G221800 Sobic006G221800 Sobic001G175100--Sobic006G221800 Sobic001G101700 Sobic001G101700 Sobic001G175100--Sobic001G101700 Sobic008G088800 Sobic008G088800 Sobic001G175100--Sobic008G088800 Sobic007G147200 Sobic007G147200 Sobic001G175100--Sobic007G147200 Sobic001G143400 Sobic001G143400 Sobic001G175100--Sobic001G143400 Sobic008G138000 Sobic008G138000 Sobic001G175100--Sobic008G138000 Sobic009G125800--Sobic009G136000 Sobic009G125800--Sobic004G117400 Sobic009G125800--Sobic001G082800 Sobic009G125800--Sobic009G131200 Sobic009G125800--Sobic002G390800 Sobic009G125800--Sobic010G009700 Sobic007G146200 Sobic007G146200 Sobic009G125800--Sobic007G146200 Sobic008G188800 Sobic008G188800 Sobic009G125800--Sobic008G188800 Sobic009G214500 Sobic009G214500 Sobic009G125800--Sobic009G214500 Sobic006G272800 Sobic006G272800 Sobic008G070700--Sobic006G272800 Sobic002G112000 Sobic002G112000 Sobic008G070700--Sobic002G112000 Sobic004G267600 Sobic004G267600 Sobic008G070700--Sobic004G267600 Sobic001G439800 Sobic001G439800 Sobic008G070700--Sobic001G439800 Sobic010G222800 Sobic010G222800 Sobic008G070700--Sobic010G222800 Sobic010G092400 Sobic010G092400 Sobic008G070700--Sobic010G092400 Sobic002G317700 Sobic002G317700 Sobic008G070700--Sobic002G317700 Sobic008G070700--Sobic001G175100 Sobic003G393100 Sobic003G393100 Sobic008G070700--Sobic003G393100
Octagon: transcription factors


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