Gene annotation
Transcriptome id Sobic.001G279400.3,Sobic.001G279400.2,Sobic.001G279400.1
Synonym
Functional annotation -
UniProt A0A1B6QLL0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G088600 transcription factor X1, putative, expressed -
2 Sobic.003G117200 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed -
3 Sobic.003G006000 expressed protein -
4 Sobic.008G070700 leafbladeless1, putative, expressed -
5 Sobic.010G092400 glycosyl transferase 8 domain containing protein, putative, expressed -
6 Sobic.009G012400 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
7 Sobic.008G137700 XH domain containing protein, expressed -
8 Sobic.003G085900 Glycosyl hydrolase. predicted target of sbi-miR-5568 and sbi-miR-6220 expressed in the stems of sweet sorghum(PubMedID : 26117170)@glycosyl hydrolase, family 31, putative, expressed K15925: alpha-D-xyloside xylohydrolase
9 Sobic.001G137500 ankyrin, putative, expressed -
10 Sobic.002G178700 ubiquitin fusion protein, putative, expressed -
11 Sobic.009G243000 OsFBL2 - F-box domain and LRR containing protein, expressed -
12 Sobic.001G288000 ankyrin repeat domain containing protein, putative, expressed -
13 Sobic.010G024000 transketolase, chloroplast precursor, putative, expressed K00615: E2.2.1.1, tktA, transketolase
14 Sobic.010G243100 RPA2C - Putative single-stranded DNA binding complex subunit 2, expressed K10739: RFA2, replication factor A2
15 Sobic.009G083600 OsCML18 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
16 Sobic.006G271600 RNA recognition motif containing protein, putative, expressed K13126: polyadenylate-binding protein
17 Sobic.006G163300 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
18 Sobic.003G002000 expressed protein -
19 Sobic.009G136000 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
20 Sobic.010G222800 expressed protein -


Gene co-expression network
sample Sobic001G279400 Sobic001G279400 Sobic003G088600 Sobic003G088600 Sobic001G279400--Sobic003G088600 Sobic003G117200 Sobic003G117200 Sobic001G279400--Sobic003G117200 Sobic003G006000 Sobic003G006000 Sobic001G279400--Sobic003G006000 Sobic008G070700 Sobic008G070700 Sobic001G279400--Sobic008G070700 Sobic010G092400 Sobic010G092400 Sobic001G279400--Sobic010G092400 Sobic009G012400 Sobic009G012400 Sobic001G279400--Sobic009G012400 Sobic008G137700 Sobic008G137700 Sobic001G279400--Sobic008G137700 Sobic003G085900 Sobic003G085900 Sobic001G279400--Sobic003G085900 Sobic001G137500 Sobic001G137500 Sobic001G279400--Sobic001G137500 Sobic003G088600--Sobic008G137700 Sobic003G088600--Sobic001G137500 Sobic002G053350 Sobic002G053350 Sobic003G088600--Sobic002G053350 Sobic001G419500 Sobic001G419500 Sobic003G088600--Sobic001G419500 Sobic010G194600 Sobic010G194600 Sobic003G088600--Sobic010G194600 Sobic006G271600 Sobic006G271600 Sobic003G088600--Sobic006G271600 Sobic003G088600--Sobic003G006000 Sobic009G219500 Sobic009G219500 Sobic003G088600--Sobic009G219500 Sobic002G178700 Sobic002G178700 Sobic003G088600--Sobic002G178700 Sobic003G117200--Sobic006G271600 Sobic002G078900 Sobic002G078900 Sobic003G117200--Sobic002G078900 Sobic010G183800 Sobic010G183800 Sobic003G117200--Sobic010G183800 Sobic003G046400 Sobic003G046400 Sobic003G117200--Sobic003G046400 Sobic003G300000 Sobic003G300000 Sobic003G117200--Sobic003G300000 Sobic001G071600 Sobic001G071600 Sobic003G117200--Sobic001G071600 Sobic009G243000 Sobic009G243000 Sobic003G117200--Sobic009G243000 Sobic003G117200--Sobic003G006000 Sobic009G048300 Sobic009G048300 Sobic003G117200--Sobic009G048300 Sobic003G006000--Sobic002G178700 Sobic003G006000--Sobic001G137500 Sobic003G006000--Sobic001G419500 Sobic003G006000--Sobic006G271600 Sobic003G006000--Sobic002G078900 Sobic003G006000--Sobic003G088600 Sobic003G006000--Sobic009G243000 Sobic002G258000 Sobic002G258000 Sobic003G006000--Sobic002G258000 Sobic001G457600 Sobic001G457600 Sobic003G006000--Sobic001G457600 Sobic006G272800 Sobic006G272800 Sobic008G070700--Sobic006G272800 Sobic002G112000 Sobic002G112000 Sobic008G070700--Sobic002G112000 Sobic004G267600 Sobic004G267600 Sobic008G070700--Sobic004G267600 Sobic001G439800 Sobic001G439800 Sobic008G070700--Sobic001G439800 Sobic010G222800 Sobic010G222800 Sobic008G070700--Sobic010G222800 Sobic008G070700--Sobic010G092400 Sobic002G317700 Sobic002G317700 Sobic008G070700--Sobic002G317700 Sobic001G175100 Sobic001G175100 Sobic008G070700--Sobic001G175100 Sobic003G393100 Sobic003G393100 Sobic008G070700--Sobic003G393100 Sobic007G116800 Sobic007G116800 Sobic010G092400--Sobic007G116800 Sobic005G062600 Sobic005G062600 Sobic010G092400--Sobic005G062600 Sobic010G092400--Sobic003G085900 Sobic007G007800 Sobic007G007800 Sobic010G092400--Sobic007G007800 Sobic009G184200 Sobic009G184200 Sobic010G092400--Sobic009G184200 Sobic010G269700 Sobic010G269700 Sobic010G092400--Sobic010G269700 Sobic007G087800 Sobic007G087800 Sobic010G092400--Sobic007G087800 Sobic003G387700 Sobic003G387700 Sobic010G092400--Sobic003G387700 Sobic010G092400--Sobic008G070700 Sobic003G423800 Sobic003G423800 Sobic009G012400--Sobic003G423800 Sobic003G129500 Sobic003G129500 Sobic009G012400--Sobic003G129500 Sobic009G012400--Sobic002G112000 Sobic007G014100 Sobic007G014100 Sobic009G012400--Sobic007G014100 Sobic008G046200 Sobic008G046200 Sobic009G012400--Sobic008G046200 Sobic009G136000 Sobic009G136000 Sobic009G012400--Sobic009G136000 Sobic009G012400--Sobic010G222800 Sobic003G002000 Sobic003G002000 Sobic009G012400--Sobic003G002000 Sobic010G024000 Sobic010G024000 Sobic009G012400--Sobic010G024000 Sobic008G137700--Sobic003G088600 Sobic008G137700--Sobic002G053350 Sobic008G137700--Sobic001G419500 Sobic008G137700--Sobic002G178700 Sobic008G137700--Sobic001G137500 Sobic008G137700--Sobic003G300000 Sobic004G234600 Sobic004G234600 Sobic008G137700--Sobic004G234600 Sobic008G137700--Sobic010G194600 Sobic008G137700--Sobic003G006000 Sobic006G107500 Sobic006G107500 Sobic003G085900--Sobic006G107500 Sobic002G360600 Sobic002G360600 Sobic003G085900--Sobic002G360600 Sobic004G237000 Sobic004G237000 Sobic003G085900--Sobic004G237000 Sobic003G085900--Sobic010G092400 Sobic002G430700 Sobic002G430700 Sobic003G085900--Sobic002G430700 Sobic007G147200 Sobic007G147200 Sobic003G085900--Sobic007G147200 Sobic006G163300 Sobic006G163300 Sobic003G085900--Sobic006G163300 Sobic003G085900--Sobic003G046400 Sobic003G316601 Sobic003G316601 Sobic003G085900--Sobic003G316601 Sobic001G137500--Sobic001G419500 Sobic001G137500--Sobic002G258000 Sobic001G137500--Sobic001G457600 Sobic001G137500--Sobic002G178700 Sobic001G137500--Sobic003G006000 Sobic007G193300 Sobic007G193300 Sobic001G137500--Sobic007G193300 Sobic001G137400 Sobic001G137400 Sobic001G137500--Sobic001G137400 Sobic001G137500--Sobic010G194600 Sobic001G137500--Sobic003G088600
Octagon: transcription factors


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