Gene annotation
Transcriptome id Sobic.003G289500.1
Synonym Sb03g034010
Functional annotation selenium-binding protein, related, putative, expressed
UniProt C5XJ67
Pfam PF01535 PF14432
Panther DB PTHR24015 PTHR24015:SF583
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G25580 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os01g53610.1 : selenium-binding protein, related, putative, expressed
MaizeGDB (Corn) Zm00025a027676
Brachypodium PNT72801
Barley HORVU3Hr1G070040.6 , HORVU3Hr1G070040.7 , HORVU3Hr1G070040.4 , HORVU3Hr1G070040.5 , HORVU3Hr1G070040.2 , HORVU3Hr1G070040.3 , HORVU3Hr1G070040.1
Wheat TraesCS3B02G312600 , TraesCS3A02G278400 , TraesCS3D02G278700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G455800 methionyl-tRNA synthetase, putative, expressed K01874: MARS, methionyl-tRNA synthetase
2 Sobic.006G196300 glycosyl transferase, group 1 domain containing protein, expressed K03843: alpha-1,3/alpha-1,6-mannosyltransferase
3 Sobic.001G244300 GA19388-PA, putative, expressed K10768: alkylated DNA repair protein alkB homolog 6
4 Sobic.010G265300 AAA-type ATPase family protein, putative, expressed -
5 Sobic.001G207500 ZOS10-06 - C2H2 zinc finger protein, expressed K15685: E3 ubiquitin-protein ligase Hakai
6 Sobic.006G096900 expressed protein -
7 Sobic.008G063300 exonuclease, putative, expressed K14570: REX1, REXO1, RNA exonuclease 1
8 Sobic.005G172500 WD repeat-containing protein, putative, expressed K08266: MLST8, target of rapamycin complex subunit LST8
9 Sobic.001G405600 basic helix-loop-helix, putative, expressed K10863: aprataxin
10 Sobic.006G093300 expressed protein K02519: infB, translation initiation factor IF-2
11 Sobic.003G132000 proteasome subunit, putative, expressed K12176: COPS2, CSN2, COP9 signalosome complex subunit 2
12 Sobic.001G434200 AGAP008572-PA, putative, expressed K17796: mitochondrial import inner membrane translocase subunit TIM21
13 Sobic.010G059500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
14 Sobic.001G120500 toc64, putative, expressed -
15 Sobic.001G114500 ATP binding protein, putative, expressed K06883: uncharacterized protein
16 Sobic.002G371700 signal recognition particle 68 kDa protein, putative, expressed K03107: signal recognition particle subunit SRP68
17 Sobic.004G131300 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
18 Sobic.003G363700 OsFBL5 - F-box domain and LRR containing protein, expressed -
19 Sobic.001G227400 WD domain, G-beta repeat domain containing protein, expressed -
20 Sobic.001G151100 CCR4-NOT transcription factor, putative, expressed K12580: CNOT3, CCR4-NOT transcription complex subunit 3


Gene co-expression network
sample Sobic003G289500 Sobic003G289500 Sobic001G455800 Sobic001G455800 Sobic003G289500--Sobic001G455800 Sobic006G196300 Sobic006G196300 Sobic003G289500--Sobic006G196300 Sobic001G244300 Sobic001G244300 Sobic003G289500--Sobic001G244300 Sobic010G265300 Sobic010G265300 Sobic003G289500--Sobic010G265300 Sobic001G207500 Sobic001G207500 Sobic003G289500--Sobic001G207500 Sobic006G096900 Sobic006G096900 Sobic003G289500--Sobic006G096900 Sobic008G063300 Sobic008G063300 Sobic003G289500--Sobic008G063300 Sobic005G172500 Sobic005G172500 Sobic003G289500--Sobic005G172500 Sobic001G405600 Sobic001G405600 Sobic003G289500--Sobic001G405600 Sobic009G016400 Sobic009G016400 Sobic001G455800--Sobic009G016400 Sobic002G150700 Sobic002G150700 Sobic001G455800--Sobic002G150700 Sobic001G455800--Sobic006G196300 Sobic004G340400 Sobic004G340400 Sobic001G455800--Sobic004G340400 Sobic002G371700 Sobic002G371700 Sobic001G455800--Sobic002G371700 Sobic001G447300 Sobic001G447300 Sobic001G455800--Sobic001G447300 Sobic002G142900 Sobic002G142900 Sobic001G455800--Sobic002G142900 Sobic008G160000 Sobic008G160000 Sobic001G455800--Sobic008G160000 Sobic001G145400 Sobic001G145400 Sobic001G455800--Sobic001G145400 Sobic003G264100 Sobic003G264100 Sobic006G196300--Sobic003G264100 Sobic002G405400 Sobic002G405400 Sobic006G196300--Sobic002G405400 Sobic006G196300--Sobic001G455800 Sobic006G196300--Sobic002G142900 Sobic010G020400 Sobic010G020400 Sobic006G196300--Sobic010G020400 Sobic001G333100 Sobic001G333100 Sobic006G196300--Sobic001G333100 Sobic001G227400 Sobic001G227400 Sobic006G196300--Sobic001G227400 Sobic004G241900 Sobic004G241900 Sobic006G196300--Sobic004G241900 Sobic002G303600 Sobic002G303600 Sobic006G196300--Sobic002G303600 Sobic001G120500 Sobic001G120500 Sobic001G244300--Sobic001G120500 Sobic001G244300--Sobic008G063300 Sobic001G407700 Sobic001G407700 Sobic001G244300--Sobic001G407700 Sobic001G244300--Sobic005G172500 Sobic009G056200 Sobic009G056200 Sobic001G244300--Sobic009G056200 Sobic007G102700 Sobic007G102700 Sobic001G244300--Sobic007G102700 Sobic001G058200 Sobic001G058200 Sobic001G244300--Sobic001G058200 Sobic004G156800 Sobic004G156800 Sobic001G244300--Sobic004G156800 Sobic001G401500 Sobic001G401500 Sobic001G244300--Sobic001G401500 Sobic010G265300--Sobic001G120500 Sobic005G160400 Sobic005G160400 Sobic010G265300--Sobic005G160400 Sobic010G092300 Sobic010G092300 Sobic010G265300--Sobic010G092300 Sobic010G265300--Sobic005G172500 Sobic008G076800 Sobic008G076800 Sobic010G265300--Sobic008G076800 Sobic004G092500 Sobic004G092500 Sobic010G265300--Sobic004G092500 Sobic007G084100 Sobic007G084100 Sobic010G265300--Sobic007G084100 Sobic004G257100 Sobic004G257100 Sobic010G265300--Sobic004G257100 Sobic001G226700 Sobic001G226700 Sobic010G265300--Sobic001G226700 Sobic001G341500 Sobic001G341500 Sobic001G207500--Sobic001G341500 Sobic003G395300 Sobic003G395300 Sobic001G207500--Sobic003G395300 Sobic007G105900 Sobic007G105900 Sobic001G207500--Sobic007G105900 Sobic001G207500--Sobic001G405600 Sobic007G167900 Sobic007G167900 Sobic001G207500--Sobic007G167900 Sobic003G273400 Sobic003G273400 Sobic001G207500--Sobic003G273400 Sobic006G039400 Sobic006G039400 Sobic001G207500--Sobic006G039400 Sobic001G358500 Sobic001G358500 Sobic001G207500--Sobic001G358500 Sobic002G347000 Sobic002G347000 Sobic001G207500--Sobic002G347000 Sobic006G096900--Sobic008G063300 Sobic009G177500 Sobic009G177500 Sobic006G096900--Sobic009G177500 Sobic006G252900 Sobic006G252900 Sobic006G096900--Sobic006G252900 Sobic003G360400 Sobic003G360400 Sobic006G096900--Sobic003G360400 Sobic003G095900 Sobic003G095900 Sobic006G096900--Sobic003G095900 Sobic006G056700 Sobic006G056700 Sobic006G096900--Sobic006G056700 Sobic001G433800 Sobic001G433800 Sobic006G096900--Sobic001G433800 Sobic001G384300 Sobic001G384300 Sobic006G096900--Sobic001G384300 Sobic009G044800 Sobic009G044800 Sobic006G096900--Sobic009G044800 Sobic004G140600 Sobic004G140600 Sobic008G063300--Sobic004G140600 Sobic008G063300--Sobic001G433800 Sobic008G063300--Sobic006G096900 Sobic008G063300--Sobic003G360400 Sobic008G063300--Sobic003G095900 Sobic010G123600 Sobic010G123600 Sobic008G063300--Sobic010G123600 Sobic003G188400 Sobic003G188400 Sobic008G063300--Sobic003G188400 Sobic008G063300--Sobic009G177500 Sobic010G059500 Sobic010G059500 Sobic008G063300--Sobic010G059500 Sobic004G131300 Sobic004G131300 Sobic005G172500--Sobic004G131300 Sobic006G148100 Sobic006G148100 Sobic005G172500--Sobic006G148100 Sobic005G172500--Sobic009G056200 Sobic001G493200 Sobic001G493200 Sobic005G172500--Sobic001G493200 Sobic005G172500--Sobic001G227400 Sobic002G371300 Sobic002G371300 Sobic005G172500--Sobic002G371300 Sobic005G172500--Sobic002G142900 Sobic003G408600 Sobic003G408600 Sobic005G172500--Sobic003G408600 Sobic005G172500--Sobic004G257100 Sobic007G017800 Sobic007G017800 Sobic001G405600--Sobic007G017800 Sobic010G034100 Sobic010G034100 Sobic001G405600--Sobic010G034100 Sobic001G405600--Sobic007G105900 Sobic001G405600--Sobic010G059500 Sobic003G143200 Sobic003G143200 Sobic001G405600--Sobic003G143200 Sobic006G234700 Sobic006G234700 Sobic001G405600--Sobic006G234700 Sobic001G405600--Sobic006G039400 Sobic003G296900 Sobic003G296900 Sobic001G405600--Sobic003G296900 Sobic001G035200 Sobic001G035200 Sobic001G405600--Sobic001G035200
Octagon: transcription factors


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