Gene annotation
Transcriptome id Sobic.003G301950.3,Sobic.003G301950.1,Sobic.003G301950.2
Synonym -
Functional annotation -
UniProt A0A1W0VZQ1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G082700 TKL_IRAK_CrRLK1L-1.1 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
2 Sobic.002G387000 expressed protein -
3 Sobic.003G030200 phosphopantothenoylcysteine decarboxylase, putative, expressed K01598: PPCDC, phosphopantothenoylcysteine decarboxylase
4 Sobic.002G197400 expressed protein -
5 Sobic.009G147600 pentatricopeptide, putative, expressed -
6 Sobic.007G189900 membrane associated DUF588 domain containing protein, putative, expressed -
7 Sobic.004G091300 receptor-like protein kinase precursor, putative, expressed -
8 Sobic.001G312801 - -
9 Sobic.003G276400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Alpha-amylase isozime 2 precursor AMY3 (Os)(PubMedID : 27208977)@alpha-amylase precursor, putative, expressed -
10 Sobic.006G280250 - -
11 Sobic.004G306700 peptidyl-prolyl cis-trans isomerase CYP40, putative, expressed K05864: PPID, peptidyl-prolyl isomerase D
12 Sobic.001G506066 - -
13 Sobic.002G123700 - -
14 Sobic.008G075500 verticillium wilt disease resistance protein, putative, expressed -
15 Sobic.004G026000 ankyrin repeat domain-containing protein, chloroplast precursor, putative, expressed -
16 Sobic.010G242000 phytosulfokine receptor precursor, putative, expressed -
17 Sobic.001G104100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ACT domain containing protein, expressed -
18 Sobic.001G490600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribosomal L18p/L5e family protein, putative, expressed -
19 Sobic.001G093732 - -
20 Sobic.010G105900 - -


Gene co-expression network
sample Sobic003G301950 Sobic003G301950 Sobic001G082700 Sobic001G082700 Sobic003G301950--Sobic001G082700 Sobic002G387000 Sobic002G387000 Sobic003G301950--Sobic002G387000 Sobic003G030200 Sobic003G030200 Sobic003G301950--Sobic003G030200 Sobic002G197400 Sobic002G197400 Sobic003G301950--Sobic002G197400 Sobic009G147600 Sobic009G147600 Sobic003G301950--Sobic009G147600 Sobic007G189900 Sobic007G189900 Sobic003G301950--Sobic007G189900 Sobic004G091300 Sobic004G091300 Sobic003G301950--Sobic004G091300 Sobic001G312801 Sobic001G312801 Sobic003G301950--Sobic001G312801 Sobic003G276400 Sobic003G276400 Sobic003G301950--Sobic003G276400 Sobic001G082700--Sobic003G301950 Sobic007G165100 Sobic007G165100 Sobic001G082700--Sobic007G165100 Sobic006G082100 Sobic006G082100 Sobic001G082700--Sobic006G082100 Sobic008G075500 Sobic008G075500 Sobic001G082700--Sobic008G075500 Sobic001G082700--Sobic002G387000 Sobic010G242000 Sobic010G242000 Sobic001G082700--Sobic010G242000 Sobic006G280250 Sobic006G280250 Sobic001G082700--Sobic006G280250 Sobic008G159800 Sobic008G159800 Sobic001G082700--Sobic008G159800 Sobic001G082700--Sobic004G091300 Sobic002G387000--Sobic007G189900 Sobic002G387000--Sobic001G312801 Sobic010G118401 Sobic010G118401 Sobic002G387000--Sobic010G118401 Sobic009G112500 Sobic009G112500 Sobic002G387000--Sobic009G112500 Sobic002G387000--Sobic003G301950 Sobic001G490600 Sobic001G490600 Sobic002G387000--Sobic001G490600 Sobic009G181900 Sobic009G181900 Sobic002G387000--Sobic009G181900 Sobic001G507700 Sobic001G507700 Sobic002G387000--Sobic001G507700 Sobic002G387000--Sobic009G147600 Sobic003G030200--Sobic001G312801 Sobic003G030200--Sobic001G490600 Sobic003G030200--Sobic009G147600 Sobic001G191400 Sobic001G191400 Sobic003G030200--Sobic001G191400 Sobic001G368000 Sobic001G368000 Sobic003G030200--Sobic001G368000 Sobic003G106100 Sobic003G106100 Sobic003G030200--Sobic003G106100 Sobic007G213500 Sobic007G213500 Sobic003G030200--Sobic007G213500 Sobic007G017300 Sobic007G017300 Sobic003G030200--Sobic007G017300 Sobic003G030200--Sobic003G301950 Sobic002G197400--Sobic004G091300 Sobic008G160100 Sobic008G160100 Sobic002G197400--Sobic008G160100 Sobic002G110600 Sobic002G110600 Sobic002G197400--Sobic002G110600 Sobic008G016800 Sobic008G016800 Sobic002G197400--Sobic008G016800 Sobic004G310400 Sobic004G310400 Sobic002G197400--Sobic004G310400 Sobic001G096200 Sobic001G096200 Sobic002G197400--Sobic001G096200 Sobic004G026000 Sobic004G026000 Sobic002G197400--Sobic004G026000 Sobic002G399000 Sobic002G399000 Sobic002G197400--Sobic002G399000 Sobic003G118500 Sobic003G118500 Sobic002G197400--Sobic003G118500 Sobic004G202750 Sobic004G202750 Sobic009G147600--Sobic004G202750 Sobic001G028500 Sobic001G028500 Sobic009G147600--Sobic001G028500 Sobic009G147600--Sobic001G312801 Sobic004G149000 Sobic004G149000 Sobic009G147600--Sobic004G149000 Sobic002G320700 Sobic002G320700 Sobic009G147600--Sobic002G320700 Sobic001G104100 Sobic001G104100 Sobic009G147600--Sobic001G104100 Sobic009G147600--Sobic003G030200 Sobic005G025400 Sobic005G025400 Sobic009G147600--Sobic005G025400 Sobic004G190800 Sobic004G190800 Sobic009G147600--Sobic004G190800 Sobic007G189900--Sobic002G387000 Sobic007G189900--Sobic001G312801 Sobic010G105900 Sobic010G105900 Sobic007G189900--Sobic010G105900 Sobic007G189900--Sobic009G181900 Sobic007G189900--Sobic004G310400 Sobic004G257900 Sobic004G257900 Sobic007G189900--Sobic004G257900 Sobic010G043700 Sobic010G043700 Sobic007G189900--Sobic010G043700 Sobic007G189900--Sobic003G301950 Sobic003G262500 Sobic003G262500 Sobic007G189900--Sobic003G262500 Sobic002G321700 Sobic002G321700 Sobic004G091300--Sobic002G321700 Sobic004G091300--Sobic002G197400 Sobic010G042300 Sobic010G042300 Sobic004G091300--Sobic010G042300 Sobic006G279100 Sobic006G279100 Sobic004G091300--Sobic006G279100 Sobic004G091300--Sobic008G160100 Sobic004G091300--Sobic006G280250 Sobic001G483001 Sobic001G483001 Sobic004G091300--Sobic001G483001 Sobic001G093732 Sobic001G093732 Sobic004G091300--Sobic001G093732 Sobic004G091300--Sobic008G075500 Sobic004G288900 Sobic004G288900 Sobic001G312801--Sobic004G288900 Sobic001G312801--Sobic001G490600 Sobic001G312801--Sobic001G368000 Sobic009G184500 Sobic009G184500 Sobic001G312801--Sobic009G184500 Sobic001G312801--Sobic004G190800 Sobic001G312801--Sobic007G017300 Sobic009G170301 Sobic009G170301 Sobic001G312801--Sobic009G170301 Sobic008G096300 Sobic008G096300 Sobic001G312801--Sobic008G096300 Sobic002G138200 Sobic002G138200 Sobic001G312801--Sobic002G138200 Sobic004G144300 Sobic004G144300 Sobic003G276400--Sobic004G144300 Sobic003G276400--Sobic001G104100 Sobic003G001650 Sobic003G001650 Sobic003G276400--Sobic003G001650 Sobic003G276400--Sobic005G025400 Sobic001G113400 Sobic001G113400 Sobic003G276400--Sobic001G113400 Sobic006G024400 Sobic006G024400 Sobic003G276400--Sobic006G024400 Sobic003G362800 Sobic003G362800 Sobic003G276400--Sobic003G362800 Sobic009G049100 Sobic009G049100 Sobic003G276400--Sobic009G049100 Sobic005G014400 Sobic005G014400 Sobic003G276400--Sobic005G014400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.