Gene annotation
Transcriptome id Sobic.003G344700.1,Sobic.003G344700.2
Synonym Sb03g038840, 1, AMT2, ATAMT2
Functional annotation ammonium transporter protein, putative, expressed
UniProt C5XP00 , A0A1W0W095 , A0A1B6Q6W5
Pfam PF00909
Panther DB PTHR11730 PTHR11730:SF38 PTHR11730:SF38 PTHR11730
NCBI CDD KOG0682; Ammonia permease
KEGG Orthology K03320; amt, AMT, ammonium transporter, Amt family
Gene Ontology GO:0008519; ammonium transmembrane transporter activity GO:0015696ammonium transport GO:0016020membrane GO:0016020membrane GO:0015696ammonium transport GO:0008519ammonium transmembrane transporter activity


Orthologs (automatic annotation)
TAIR AT2G38290 : ammonium transporter 2
RAP-DB (Rice) LOC_Os01g61550.1 : ammonium transporter protein, putative, expressed
MaizeGDB (Corn) Zm00025a020615 , Zm00025a016807 , Zm00025a043934 , Zm00025a039553 , Zm00025a008959
Brachypodium KQK05814 , KQK10804 , KQK10805 , KQK12242
Barley HORVU3Hr1G087690.2 , HORVU5Hr1G095030.2 , HORVU3Hr1G087690.1 , HORVU5Hr1G118590.9 , HORVU5Hr1G118590.8 , HORVU5Hr1G118590.7 , HORVU5Hr1G118590.6 , HORVU5Hr1G118590.2 , HORVU5Hr1G118590.1 , HORVU0Hr1G014360.2 , HORVU0Hr1G014360.3 , HORVU0Hr1G014360.1 , HORVU3Hr1G082610.2 , HORVU3Hr1G082610.1 , HORVU1Hr1G070730.8 , HORVU1Hr1G070730.6 , HORVU1Hr1G070730.7 , HORVU1Hr1G070730.4 , HORVU1Hr1G070730.5 , HORVU1Hr1G070730.2 , HORVU1Hr1G070730.3 , HORVU1Hr1G070730.1
Wheat TraesCS3A02G350800 , TraesCS3D02G344800 , TraesCS5D02G519400 , TraesCS5D02G519400 , TraesCS5B02G520200 , TraesCS1D02G296600 , TraesCS3B02G383400 , TraesCS4A02G352900 , TraesCS1A02G295300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G213000 - -
2 Sobic.001G301600 expansin precursor, putative, expressed -
3 Sobic.001G098600 expressed protein -
4 Sobic.003G371100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@POT family protein, expressed -
5 Sobic.001G355600 helix-loop-helix DNA-binding domain containing protein, expressed -
6 Sobic.004G035700 - -
7 Sobic.007G226200 - -
8 Sobic.001G338500 ACT domain containing protein, expressed -
9 Sobic.001G297400 histone H3, putative, expressed K11253: histone H3
10 Sobic.003G237600 expressed protein -
11 Sobic.006G069300 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
12 Sobic.010G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@agenet domain containing protein, putative, expressed -
13 Sobic.002G214300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.001G189100 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
15 Sobic.001G189100 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
16 Sobic.010G038500 GDSL-like lipase/acylhydrolase, putative, expressed -
17 Sobic.001G361700 expressed protein -
18 Sobic.004G095000 zinc knuckle family protein, expressed K03257: translation initiation factor 4A
19 Sobic.009G222200 E3 ubiquitin ligase, putative, expressed K16276: K16276, zinc finger protein-like protein
20 Sobic.009G254600 hydrolase, alpha/beta fold family domain containing protein, expressed -


Gene co-expression network
sample Sobic003G344700 Sobic003G344700 Sobic002G213000 Sobic002G213000 Sobic003G344700--Sobic002G213000 Sobic001G301600 Sobic001G301600 Sobic003G344700--Sobic001G301600 Sobic001G098600 Sobic001G098600 Sobic003G344700--Sobic001G098600 Sobic003G371100 Sobic003G371100 Sobic003G344700--Sobic003G371100 Sobic001G355600 Sobic001G355600 Sobic003G344700--Sobic001G355600 Sobic004G035700 Sobic004G035700 Sobic003G344700--Sobic004G035700 Sobic007G226200 Sobic007G226200 Sobic003G344700--Sobic007G226200 Sobic001G338500 Sobic001G338500 Sobic003G344700--Sobic001G338500 Sobic001G297400 Sobic001G297400 Sobic003G344700--Sobic001G297400 Sobic002G213000--Sobic004G035700 Sobic010G183100 Sobic010G183100 Sobic002G213000--Sobic010G183100 Sobic001G068400 Sobic001G068400 Sobic002G213000--Sobic001G068400 Sobic002G213000--Sobic001G297400 Sobic009G254600 Sobic009G254600 Sobic002G213000--Sobic009G254600 Sobic001G189100 Sobic001G189100 Sobic002G213000--Sobic001G189100 Sobic003G237600 Sobic003G237600 Sobic002G213000--Sobic003G237600 Sobic008G081200 Sobic008G081200 Sobic002G213000--Sobic008G081200 Sobic001G301600--Sobic003G344700 Sobic001G301600--Sobic003G371100 Sobic001G301600--Sobic002G213000 Sobic001G301600--Sobic001G355600 Sobic001G301500 Sobic001G301500 Sobic001G301600--Sobic001G301500 Sobic001G301600--Sobic003G237600 Sobic002G357000 Sobic002G357000 Sobic001G301600--Sobic002G357000 Sobic001G300800 Sobic001G300800 Sobic001G301600--Sobic001G300800 Sobic007G058200 Sobic007G058200 Sobic001G301600--Sobic007G058200 Sobic010G038500 Sobic010G038500 Sobic001G098600--Sobic010G038500 Sobic001G098600--Sobic004G035700 Sobic001G344600 Sobic001G344600 Sobic001G098600--Sobic001G344600 Sobic005G065500 Sobic005G065500 Sobic001G098600--Sobic005G065500 Sobic005G217900 Sobic005G217900 Sobic001G098600--Sobic005G217900 Sobic001G098600--Sobic001G068400 Sobic001G098600--Sobic009G254600 Sobic001G098600--Sobic010G183100 Sobic001G361700 Sobic001G361700 Sobic001G098600--Sobic001G361700 Sobic003G371100--Sobic001G355600 Sobic003G371100--Sobic007G226200 Sobic003G371100--Sobic002G213000 Sobic003G371100--Sobic001G189100 Sobic003G371100--Sobic003G237600 Sobic003G326400 Sobic003G326400 Sobic003G371100--Sobic003G326400 Sobic009G222200 Sobic009G222200 Sobic003G371100--Sobic009G222200 Sobic003G371100--Sobic003G344700 Sobic001G355600--Sobic001G189100 Sobic001G355600--Sobic003G237600 Sobic001G355600--Sobic009G222200 Sobic001G355600--Sobic003G371100 Sobic003G036100 Sobic003G036100 Sobic001G355600--Sobic003G036100 Sobic001G355600--Sobic010G183100 Sobic008G106200 Sobic008G106200 Sobic001G355600--Sobic008G106200 Sobic001G355600--Sobic009G254600 Sobic004G035700--Sobic010G183100 Sobic007G189700 Sobic007G189700 Sobic004G035700--Sobic007G189700 Sobic004G035700--Sobic001G068400 Sobic010G183032 Sobic010G183032 Sobic004G035700--Sobic010G183032 Sobic010G108401 Sobic010G108401 Sobic004G035700--Sobic010G108401 Sobic004G035700--Sobic009G254600 Sobic004G035700--Sobic010G038500 Sobic002G040100 Sobic002G040100 Sobic004G035700--Sobic002G040100 Sobic004G035700--Sobic001G297400 Sobic007G226200--Sobic003G371100 Sobic002G195100 Sobic002G195100 Sobic007G226200--Sobic002G195100 Sobic007G226200--Sobic005G065500 Sobic007G226200--Sobic001G098600 Sobic006G006700 Sobic006G006700 Sobic007G226200--Sobic006G006700 Sobic007G226200--Sobic002G213000 Sobic010G157000 Sobic010G157000 Sobic007G226200--Sobic010G157000 Sobic007G226200--Sobic003G237600 Sobic007G226200--Sobic001G189100 Sobic010G276400 Sobic010G276400 Sobic001G338500--Sobic010G276400 Sobic003G199800 Sobic003G199800 Sobic001G338500--Sobic003G199800 Sobic010G109500 Sobic010G109500 Sobic001G338500--Sobic010G109500 Sobic004G026700 Sobic004G026700 Sobic001G338500--Sobic004G026700 Sobic002G000500 Sobic002G000500 Sobic001G338500--Sobic002G000500 Sobic004G035500 Sobic004G035500 Sobic001G338500--Sobic004G035500 Sobic004G026300 Sobic004G026300 Sobic001G338500--Sobic004G026300 Sobic001G338500--Sobic001G068400 Sobic006G147300 Sobic006G147300 Sobic001G338500--Sobic006G147300 Sobic001G297400--Sobic010G183032 Sobic001G297400--Sobic010G108401 Sobic001G297400--Sobic004G035700 Sobic001G297400--Sobic010G183100 Sobic001G297400--Sobic001G068400 Sobic001G297400--Sobic002G040100 Sobic001G297400--Sobic002G213000 Sobic001G297400--Sobic010G038500 Sobic001G297400--Sobic009G254600
Octagon: transcription factors


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